>ref|NM_191798.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 825

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 94/109 (86%), Gaps = 3/109 (2%)
 Strand = Plus / Minus

                                                                       
Query: 364 cagttcttgacgccgagcggcatgggcatgccgtcctggacggccac---cggcagcgac 420
           ||||||||||  | ||||| |||||||||||||||||| ||||| ||   ||||| ||||
Sbjct: 824 cagttcttgatccggagcgtcatgggcatgccgtcctgcacggcgacggccggcaacgac 765

                                                            
Query: 421 tcgagcttgcagtcgagcggcagcagctggctctcctcgacgagcaccc 469
           ||||||||||||||||||||| |||| |  |||||||||| ||||||||
Sbjct: 764 tcgagcttgcagtcgagcggcggcaggttcctctcctcgaggagcaccc 716

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 94/109 (86%), Gaps = 3/109 (2%)
 Strand = Plus / Plus

                                                                            
Query: 364      cagttcttgacgccgagcggcatgggcatgccgtcctggacggccac---cggcagcgac 420
                ||||||||||  | ||||| |||||||||||||||||| ||||| ||   ||||| ||||
Sbjct: 30018815 cagttcttgatccggagcgtcatgggcatgccgtcctgcacggcgacggccggcaacgac 30018874

                                                                 
Query: 421      tcgagcttgcagtcgagcggcagcagctggctctcctcgacgagcaccc 469
                ||||||||||||||||||||| |||| |  |||||||||| ||||||||
Sbjct: 30018875 tcgagcttgcagtcgagcggcggcaggttcctctcctcgaggagcaccc 30018923



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 40      tattctttttgtcaatccat 59
               ||||||||||||||||||||
Sbjct: 3065146 tattctttttgtcaatccat 3065165

>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 94/109 (86%), Gaps = 3/109 (2%)
 Strand = Plus / Plus

                                                                         
Query: 364   cagttcttgacgccgagcggcatgggcatgccgtcctggacggccac---cggcagcgac 420
             ||||||||||  | ||||| |||||||||||||||||| ||||| ||   ||||| ||||
Sbjct: 14805 cagttcttgatccggagcgtcatgggcatgccgtcctgcacggcgacggccggcaacgac 14864

                                                              
Query: 421   tcgagcttgcagtcgagcggcagcagctggctctcctcgacgagcaccc 469
             ||||||||||||||||||||| |||| |  |||||||||| ||||||||
Sbjct: 14865 tcgagcttgcagtcgagcggcggcaggttcctctcctcgaggagcaccc 14913

>dbj|AK061237.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C03, full
           insert sequence
          Length = 1100

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 94/109 (86%), Gaps = 3/109 (2%)
 Strand = Plus / Minus

                                                                       
Query: 364 cagttcttgacgccgagcggcatgggcatgccgtcctggacggccac---cggcagcgac 420
           ||||||||||  | ||||| |||||||||||||||||| ||||| ||   ||||| ||||
Sbjct: 908 cagttcttgatccggagcgtcatgggcatgccgtcctgcacggcgacggccggcaacgac 849

                                                            
Query: 421 tcgagcttgcagtcgagcggcagcagctggctctcctcgacgagcaccc 469
           ||||||||||||||||||||| |||| |  |||||||||| ||||||||
Sbjct: 848 tcgagcttgcagtcgagcggcggcaggttcctctcctcgaggagcaccc 800

>gb|AY105086.1| Zea mays PCO107611 mRNA sequence
          Length = 615

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/81 (86%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                       
Query: 364 cagttcttgacgccgagcggca---tgggcatgccgtcctggacggccaccggcagcgac 420
           |||||||||||||| |||||||   ||||||| ||||||||  |||| || ||||  |||
Sbjct: 379 cagttcttgacgcccagcggcacgatgggcataccgtcctgcgcggcgacgggcatggac 320

                                
Query: 421 tcgagcttgcagtcgagcggc 441
           |||||||||||||||||||||
Sbjct: 319 tcgagcttgcagtcgagcggc 299

>gb|AY107750.1| Zea mays PCO107612 mRNA sequence
          Length = 1158

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 75/90 (83%), Gaps = 6/90 (6%)
 Strand = Plus / Minus

                                                                       
Query: 364 cagttcttgacgccgagcggcatg--gg----catgccgtcctggacggccaccggcagc 417
           |||| |||||||||||||||||||  ||    |||||| |||||  |||| || ||||  
Sbjct: 898 cagtgcttgacgccgagcggcatgatgggtcccatgccctcctgcgcggcaacgggcatg 839

                                         
Query: 418 gactcgagcttgcagtcgagcggcagcagc 447
           |||||||||||||||||||||||| |||||
Sbjct: 838 gactcgagcttgcagtcgagcggcggcagc 809

>gb|AC116628.4| Homo sapiens BAC clone RP11-369F24 from 2, complete sequence
          Length = 107755

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   agaatcagaagatatatcaga 298
             |||||||||||||||||||||
Sbjct: 94445 agaatcagaagatatatcaga 94425

>gb|AC009406.5| Homo sapiens BAC clone RP11-201J10 from 2, complete sequence
          Length = 156817

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   agaatcagaagatatatcaga 298
             |||||||||||||||||||||
Sbjct: 53850 agaatcagaagatatatcaga 53830

>gb|AC132152.3| Homo sapiens BAC clone CTD-2014D7 from 2, complete sequence
          Length = 142372

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   agaatcagaagatatatcaga 298
             |||||||||||||||||||||
Sbjct: 43451 agaatcagaagatatatcaga 43471

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 388     ggcatgccgtcctggacggccaccg 412
               ||||||||||||||| |||||||||
Sbjct: 1092035 ggcatgccgtcctgggcggccaccg 1092011

>gb|AY722918.2| Borrelia garinii PBi variable plasmid segment G11a17h03.s1, WORKING
            DRAFT SEQUENCE
          Length = 17646

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  aaatcagaatcagaagatat 292
            ||||||||||||||||||||
Sbjct: 3141 aaatcagaatcagaagatat 3122

>gb|AC169129.2| Mus musculus BAC clone RP23-259N3 from chromosome 7, complete sequence
          Length = 190493

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    actcacaaattagtcaataa 137
              ||||||||||||||||||||
Sbjct: 145255 actcacaaattagtcaataa 145236

>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04,
              complete sequence
          Length = 163670

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    cttgacgccgagcggcatgg 388
              ||||||||||||||||||||
Sbjct: 111596 cttgacgccgagcggcatgg 111615

>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02,
             complete sequence
          Length = 141027

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   cttgacgccgagcggcatgg 388
             ||||||||||||||||||||
Sbjct: 10006 cttgacgccgagcggcatgg 10025

>gb|AC154883.13| Mus musculus chromosome 7, clone RP23-8I8, complete sequence
          Length = 213537

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   actcacaaattagtcaataa 137
             ||||||||||||||||||||
Sbjct: 21706 actcacaaattagtcaataa 21687

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 369     cttgacgccgagcggcatgg 388
               ||||||||||||||||||||
Sbjct: 5687632 cttgacgccgagcggcatgg 5687651

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       catgtacttattctttttgt 51
                ||||||||||||||||||||
Sbjct: 35814560 catgtacttattctttttgt 35814579

>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0041E11
          Length = 146335

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   tattctttttgtcaatccat 59
            ||||||||||||||||||||
Sbjct: 8934 tattctttttgtcaatccat 8953

>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1282_E10
          Length = 107284

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   catgtacttattctttttgt 51
            ||||||||||||||||||||
Sbjct: 5106 catgtacttattctttttgt 5125

>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1149_C12
          Length = 120743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    catgtacttattctttttgt 51
             ||||||||||||||||||||
Sbjct: 85275 catgtacttattctttttgt 85294

>gb|AC099625.11| Mus musculus chromosome 7, clone RP24-360F21, complete sequence
          Length = 166818

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   actcacaaattagtcaataa 137
             ||||||||||||||||||||
Sbjct: 79466 actcacaaattagtcaataa 79485

>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete
              sequence
          Length = 213347

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    taatcaggcaagcaaatcag 279
              ||||||||||||||||||||
Sbjct: 135389 taatcaggcaagcaaatcag 135370

>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tattctttttgtcaatccat 59
             ||||||||||||||||||||
Sbjct: 33186 tattctttttgtcaatccat 33205


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,387,947
Number of Sequences: 3902068
Number of extensions: 3387947
Number of successful extensions: 64305
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64139
Number of HSP's gapped (non-prelim): 161
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)