Clone Name | rbart06b08 |
---|---|
Clone Library Name | barley_pub |
>gb|AF188295.1|AF188295 Festuca arundinacea cinnamyl alcohol dehydrogenase 2b mRNA, complete cds Length = 1526 Score = 335 bits (169), Expect = 8e-89 Identities = 244/269 (90%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 ||||||||| ||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 1155 gttgctcccagcgacgtcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1096 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 |||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||| || Sbjct: 1095 gagcgcgtggttgaggtagtccatcttgacgacctcgatctgcgaggtgggccccttttc 1036 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| ||| |||| |||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 1035 gacgcagaacctgagcacctcctcggtctcctcgatgctcccgatgaagctcccggtgat 976 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 |||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 975 ggtcttcctcccgagcatgaccatgggggacacgaagctgagcggctcggcgatgacgcc 916 Query: 463 catcagcacgagcttgccgtccatcttga 491 ||| || |||||||||||||||||||||| Sbjct: 915 catgaggacgagcttgccgtccatcttga 887
>gb|AF188294.1|AF188294 Festuca arundinacea cinnamyl alcohol dehydrogenase 2a mRNA, complete cds Length = 1322 Score = 335 bits (169), Expect = 8e-89 Identities = 244/269 (90%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 ||||||||| ||||||||||| || |||||||| | || |||||||||||||||||||| Sbjct: 1155 gttgctcccagcgacgtcgacgacgaagcggtacctgacatcgttgcgctcgagcctctc 1096 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 |||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 1095 gagcgcgtggttgaggtagtccatcttgacgacctcgatctgcgaggtgagccccttttc 1036 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| ||| |||| |||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 1035 gacgcagaacctgagcacctcctcggtctcctcgatgctcccgatgaagctcccggtgat 976 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 |||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 975 ggtcttcctcccgagcatgaccatgggggacacgaagctgagcggctcggcgatgacgcc 916 Query: 463 catcagcacgagcttgccgtccatcttga 491 ||| || |||||||||||||||||||||| Sbjct: 915 catgaggacgagcttgccgtccatcttga 887
>gb|AF010290.1|AF010290 Lolium perenne cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1382 Score = 327 bits (165), Expect = 2e-86 Identities = 243/269 (90%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 ||||||||| ||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 1145 gttgctccctgcgacgtcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1086 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 1085 aagcgcctggttgaggtagtccatcttgacgacctcgatctgcgaggtgaggcccttgtc 1026 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| ||| |||| |||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1025 gacgcagaacctgagcacctcctcggtctcctcgatgctcccgatgaagctgcccgtgat 966 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 |||||||||||| ||||| ||||| ||||||||||||||||||||||| | || ||||| Sbjct: 965 ggtcttcctcccgagcatgaccatgggggacacgaagctgagcggctcgccaatgacgcc 906 Query: 463 catcagcacgagcttgccgtccatcttga 491 ||| || |||||||||||||||||||||| Sbjct: 905 catgaggacgagcttgccgtccatcttga 877
>gb|AF188293.1|AF188293 Festuca arundinacea cinnamyl alcohol dehydrogenase 1b mRNA, complete cds Length = 1339 Score = 311 bits (157), Expect = 1e-81 Identities = 241/269 (89%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 ||||||||| ||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 1104 gttgctccctgcgacgtcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1045 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 1044 gagcgcctggttgaggtagtccatcttgacgacctcgatctgcgaggtgaggcccttttc 985 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| ||| | || |||||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 984 gacgcagaacctaagcacctcctcggtctcctcgatgctcccgatgaagctgccggtgat 925 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 ||||||||| || ||||| ||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 924 ggtcttccttccgagcatgaccatgggggacacgaagctgagcggctcgccgatgacgcc 865 Query: 463 catcagcacgagcttgccgtccatcttga 491 ||| || |||||||||||||||||||||| Sbjct: 864 catgaggacgagcttgccgtccatcttga 836
>gb|AF188292.1|AF188292 Festuca arundinacea cinnamyl alcohol dehydrogenase 1a mRNA, complete cds Length = 1501 Score = 311 bits (157), Expect = 1e-81 Identities = 241/269 (89%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 ||||||||| ||||| ||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 1104 gttgctccctgcgacatcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1045 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 1044 gagcgcctggttgaggtagtccatcttgacgacctcgatctgcgaggtgaggcccttttc 985 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| ||| | || |||||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 984 gacgcagaacctaagcacctcctcggtctcctcgatgctcccgatgaagctgccggtgat 925 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 ||||||||| || ||||| ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 924 ggtcttccttccgagcatgaccatgggggacacgaagctgagcggctcggcgatgacgcc 865 Query: 463 catcagcacgagcttgccgtccatcttga 491 ||| || |||||||||||||||||||||| Sbjct: 864 catgaggacgagcttgccgtccatcttga 836
>emb|AJ231135.1|SOF231135 Saccharum officinarum mRNA for cinnamyl alcohol dehydrogenase Length = 1593 Score = 276 bits (139), Expect = 6e-71 Identities = 232/263 (88%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| |||||||||||||| |||| || Sbjct: 1245 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgatc 1186 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1185 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1126 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| |||| ||| ||||| | |||||||| ||||| |||||||||||||||||||| Sbjct: 1125 gacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctccccgtgat 1066 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 || ||||| ||||||||||||||||||||||||||||||||| ||||| |||| ||||| Sbjct: 1065 ggccttccgccccagcatcaccattggggacacgaagctgaggggctcgccgatgacgcc 1006 Query: 463 catcagcacgagcttgccgtcca 485 || ||| ||| |||||||||||| Sbjct: 1005 cagcagaacgtgcttgccgtcca 983
>emb|Y13733.1|ZMCADGENE Zea mays mRNA for cinnamyl alcohol dehydrogense Length = 1516 Score = 268 bits (135), Expect = 2e-68 Identities = 231/263 (87%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| |||||||||||||| |||| ||| Sbjct: 1189 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 1130 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1129 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1070 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| |||| || ||||| | |||||||| ||||| |||||||||||||||||||| Sbjct: 1069 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 1010 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 || ||||| ||||||||||||||| || ||||||||||| || ||||| |||| ||||| Sbjct: 1009 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 950 Query: 463 catcagcacgagcttgccgtcca 485 || |||||||||||||||||||| Sbjct: 949 cagcagcacgagcttgccgtcca 927
>emb|AJ005702.1|ZMA5702 Zea mays mRNA for cinnamyl alcohol dehydrogenase Length = 1517 Score = 268 bits (135), Expect = 2e-68 Identities = 231/263 (87%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| |||||||||||||| |||| ||| Sbjct: 1134 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 1075 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1074 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1015 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| |||| || ||||| | |||||||| ||||| |||||||||||||||||||| Sbjct: 1014 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 955 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 || ||||| ||||||||||||||| || ||||||||||| || ||||| |||| ||||| Sbjct: 954 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 895 Query: 463 catcagcacgagcttgccgtcca 485 || |||||||||||||||||||| Sbjct: 894 cagcagcacgagcttgccgtcca 872
>gb|AY109876.1| Zea mays CL1675_1 mRNA sequence Length = 1649 Score = 268 bits (135), Expect = 2e-68 Identities = 231/263 (87%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| |||||||||||||| |||| ||| Sbjct: 1190 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 1131 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1130 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1071 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| |||| || ||||| | |||||||| ||||| |||||||||||||||||||| Sbjct: 1070 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 1011 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 462 || ||||| ||||||||||||||| || ||||||||||| || ||||| |||| ||||| Sbjct: 1010 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 951 Query: 463 catcagcacgagcttgccgtcca 485 || |||||||||||||||||||| Sbjct: 950 cagcagcacgagcttgccgtcca 928
>ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1387 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 1203 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 1144 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1143 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1084 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 1083 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 1024 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 1023 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 977
>ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1073_F05.31 mRNA Length = 1396 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 1197 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 1138 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1137 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1078 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 1077 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 1018 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 1017 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 971
>gb|DQ234272.1| Oryza sativa (indica cultivar-group) cinnamyl-alcohol dehydrogenase (GH2) gene, complete cds Length = 4320 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 3973 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 3914 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3913 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 3854 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 3853 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 3794 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 3793 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 3747
>tpg|BK003969.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cinnamyl alcohol dehydrogenase (CAD2) gene, complete cds Length = 4183 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 3815 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 3756 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3755 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 3696 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 3695 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 3636 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 3635 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 3589
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 4870345 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 4870404 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4870405 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 4870464 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 4870465 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 4870524 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 4870525 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 4870571
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 112504 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 112563 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 112564 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 112623 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 112624 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 112683 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 112684 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 112730
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 15084 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 15143 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 15144 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 15203 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 15204 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 15263 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 15264 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 15310
>dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G04, full insert sequence Length = 1103 Score = 260 bits (131), Expect = 4e-66 Identities = 203/227 (89%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 940 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 881 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 880 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 821 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 820 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 761 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 760 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 714
>dbj|AB122054.1| Oryza sativa (japonica cultivar-group) CAD mRNA for cinnamyl alcohol dehydrogenase, partial cds Length = 653 Score = 252 bits (127), Expect = 9e-64 Identities = 202/227 (88%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| |||||||||||||| || | ||| Sbjct: 447 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcaaggcgctc 388 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 387 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 328 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 327 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 268 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 267 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 221
>dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H09, full insert sequence Length = 1376 Score = 252 bits (127), Expect = 9e-64 Identities = 202/227 (88%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| | ||| Sbjct: 1196 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 1137 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1136 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1077 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 1076 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 1017 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || || || || ||||||||||| || || | |||||| ||||||| Sbjct: 1016 ggcctcccggccgagcatcaccatgggcgagatgaagctcagcggct 970
>dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I07, full insert sequence Length = 1396 Score = 252 bits (127), Expect = 9e-64 Identities = 202/227 (88%) Strand = Plus / Minus Query: 223 gttgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctc 282 |||||| |||||||||||||| || ||||| ||||| ||||||||||||||||| | ||| Sbjct: 1197 gttgctgccggcgacgtcgacgacgaagcgctagcggacgtcgttgcgctcgaggcgctc 1138 Query: 283 gagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtc 342 ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1137 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1078 Query: 343 gacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| || ||||| ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 1077 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagctgccggtgat 1018 Query: 403 ggtcttcctccccagcatcaccattggggacacgaagctgagcggct 449 || ||||| || ||||||||||| || || | |||||| ||||||| Sbjct: 1017 ggccttccggccgagcatcaccatgggcgagatgaagctcagcggct 971
>dbj|AK105739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A05, full insert sequence Length = 1091 Score = 172 bits (87), Expect = 7e-40 Identities = 138/155 (89%) Strand = Plus / Minus Query: 295 gacgtaatccatcttgacgacctcgatctgcgaggtgagccccttgtcgacgcaaaactt 354 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 553 gacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtcgacgcagaagtt 494 Query: 355 gaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccc 414 ||| ||||||||||||||| ||||||||||||||||||| || ||||||| ||||| || Sbjct: 493 gagcacctcctccgtctcggccatgctcccgatgaagctgccggtgatggccttccggcc 434 Query: 415 cagcatcaccattggggacacgaagctgagcggct 449 ||||||||||| || || | |||||| ||||||| Sbjct: 433 gagcatcaccatgggcgagatgaagctcagcggct 399
>emb|AJ585034.1| Schedonorus arundinaceus subsp. arundinaceus cv. S170 partial mRNA for putative cinnamyl alcohol dehydrogenase (cad gene) Length = 357 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 377 atgctcccgatgaagctccccgtgatggtcttcctccccagcatcaccattggggacacg 436 |||||||||||||||||||| ||||||||||||||||| ||||| ||||| || |||||| Sbjct: 341 atgctcccgatgaagctcccggtgatggtcttcctcccgagcatgaccatgggtgacacg 282 Query: 437 aagctgagcggctccgcgatcacgcccatcagcacgagcttgccgtccatcttga 491 |||||||||||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 281 aagctgagcggctcggcgatgacgcccatgaggaccagcttgccgtccatcttga 227
>emb|AJ585090.1| Lolium multiflorum partial mRNA for putative cinnamyl-alcohol dehydrogenase (cad gene) Length = 356 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 377 atgctcccgatgaagctccccgtgatggtcttcctccccagcatcaccattggggacacg 436 ||||||||||||||||| || |||||||||||||| || ||||| ||||| ||||||||| Sbjct: 340 atgctcccgatgaagctgccggtgatggtcttccttccgagcatgaccatgggggacacg 281 Query: 437 aagctgagcggctccgcgatcacgcccatcagcacgagcttgccgtccatcttga 491 |||||||||||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 280 aagctgagcggctcggcgatgacgcccatgaggaccagcttgccgtccatcttga 226
>gb|AY879285.1| Ocimum basilicum cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1074 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 376 catgctcccgatgaagctccccgtgatggtcttcctccccagcatcaccattgggga 432 ||||||||| |||||||| ||||||||| | |||||||| ||||||||||||||||| Sbjct: 909 catgctcccaatgaagcttcccgtgatgcttttcctcccaagcatcaccattgggga 853
>dbj|D13991.1|AAICAD Aralia cordata cadac1 mRNA for cinnamyl alcohol dehydrogenase, complete cds Length = 1462 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 365 tccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccccagcatcacc 424 |||||||| | |||||| |||||||||||||| ||||||| ||||||||| ||||| ||| Sbjct: 1043 tccgtctctttcatgctgccgatgaagctccctgtgatggccttcctcccaagcataacc 984 Query: 425 attgggga 432 || ||||| Sbjct: 983 atggggga 976
>emb|AJ811963.1| Linum album mRNA for cinnamyl-alcohol dehydrogenase (cad gene) Length = 1291 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccccagcat 420 |||||||||||| | ||||||||| |||||||||||||| || ||||||||| ||||| Sbjct: 1017 ctcctccgtctccttcatgctccctatgaagctccccgttatcaccttcctcccgagcat 958 Query: 421 caccattgggga 432 ||||| ||||| Sbjct: 957 gaccatggggga 946
>gb|AY104431.1| Zea mays PCO149657 mRNA sequence Length = 1491 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 230 ccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctcgagcgcc 289 ||||||||||||| || ||||||||||| |||||||| |||||||| ||| | ||| Sbjct: 1280 ccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctcgagccgctccatggcc 1221 Query: 290 tggttgacgtaatccatcttgacgacctcga 320 ||||||||| |||||||||| |||||||| Sbjct: 1220 gtgttgacgtagtccatcttgatgacctcga 1190
>gb|AY479972.1| Populus tomentosa cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1309 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccccagcat 420 |||||| ||||| | ||||||||| ||||||||||| ||||| | ||||||||| ||||| Sbjct: 954 ctcctctgtctccttcatgctccctatgaagctcccggtgattgacttcctcccaagcat 895 Query: 421 caccat 426 ||||| Sbjct: 894 aaccat 889
>gb|AF217957.1|AF217957 Populus tremuloides cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1395 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccccagcat 420 |||||| ||||| | ||||||||| ||||||||||| ||||| | ||| ||||| ||||| Sbjct: 964 ctcctctgtctccttcatgctccctatgaagctcccggtgatcgactttctcccaagcat 905 Query: 421 caccattgg 429 |||||||| Sbjct: 904 aaccattgg 896
>gb|AY596170.1| Populus tomentosa cinnamyl alcohol dehydrogenases gene, complete cds Length = 2125 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccc 414 |||||| ||||| | ||||||||| ||||||||||| ||||| | ||||||||| Sbjct: 1770 ctcctctgtctccttcatgctccctatgaagctcccggtgattgacttcctccc 1717
>emb|Z19568.1|PDCIALDHA P.deltoides encoding cinnamyl alcohol dehydrogenase Length = 1305 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccccagcat 420 |||||| ||||| | ||||||||| ||||||||||| ||||| | ||| ||||| ||||| Sbjct: 951 ctcctctgtctccttcatgctccctatgaagctcccggtgatagactttctcccaagcat 892 Query: 421 caccat 426 ||||| Sbjct: 891 aaccat 886
>gb|DQ358689.1| Phleum pratense cinnamyl alcohol dehydrogenase gene, partial cds Length = 1075 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 271 ctcgagcctctcgagcgcctggttgacgtaatccatcttgacgacctcga 320 |||||||| ||||| |||| ||| ||||| ||||||||||||||||||| Sbjct: 1048 ctcgagccgctcgatcgccgtgttcacgtagtccatcttgacgacctcga 999
>dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094F14, full insert sequence Length = 2015 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctcga 284 |||| ||||| ||||||| || ||||||||||| |||||||| ||| |||| ||| | Sbjct: 125 tgctgccggcaacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 184 Query: 285 gcgcctggttgacgtaatccatcttgacgacctc 318 |||| ||||||||| |||||||||| |||||| Sbjct: 185 tcgccgtgttgacgtagtccatcttgatgacctc 218
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 238 gtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcc 278 |||||| || ||||||||| | ||||||||||||||||||| Sbjct: 524556 gtcgacgacgaagcggtagtggacgtcgttgcgctcgagcc 524596
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 238 gtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcc 278 |||||| || ||||||||| | ||||||||||||||||||| Sbjct: 524556 gtcgacgacgaagcggtagtggacgtcgttgcgctcgagcc 524596
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 238 gtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcc 278 |||||| || ||||||||| | ||||||||||||||||||| Sbjct: 45756 gtcgacgacgaagcggtagtggacgtcgttgcgctcgagcc 45716
>gb|AF038561.1|AF038561 Eucalyptus globulus cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1423 Score = 48.1 bits (24), Expect = 0.027 Identities = 123/156 (78%) Strand = Plus / Minus Query: 271 ctcgagcctctcgagcgcctggttgacgtaatccatcttgacgacctcgatctgcgaggt 330 |||||||||||| || ||| |||||| ||||||||||||| || |||||||| || || Sbjct: 1135 ctcgagcctctctagggccgtgttgacataatccatcttgatcacttcgatctgggaagt 1076 Query: 331 gagccccttgtcgacgcaaaacttgaggacctcctccgtctcgtccatgctcccgatgaa 390 | ||||| || ||| |||| || | |||||| || || | ||||||||| ||||| Sbjct: 1075 caatcccttttctttgcagaactcaagcatctcctctgtttccttcatgctccctatgaa 1016 Query: 391 gctccccgtgatggtcttcctccccagcatcaccat 426 ||||| ||||| | ||||||||| ||||| ||||| Sbjct: 1015 actcccagtgattgacttcctcccaagcataaccat 980
>ref|NM_119587.2| Arabidopsis thaliana CAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5); cinnamyl-alcohol dehydrogenase AT4G34230 (CAD5) transcript variant AT4G34230.1 mRNA, complete cds Length = 1297 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 977 ctcctctgtctccttcatgctccctatgaagctccccgt 939
>ref|NM_001036711.1| Arabidopsis thaliana CAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5) AT4G34230 (CAD5) transcript variant AT4G34230.2 mRNA, complete cds Length = 1306 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 977 ctcctctgtctccttcatgctccctatgaagctccccgt 939
>gb|DQ487210.1| Linum usitatissimum cultivar Nike putative cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1535 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 376 catgctcccgatgaagctccccgtgatggtcttcctccccagcatcaccat 426 ||||||||| ||||||||||| || || ||||||||| ||||||||||| Sbjct: 991 catgctccctatgaagctccctgttatcaccttcctccctagcatcaccat 941
>gb|AY302082.1| Arabidopsis thaliana cinnamyl alcohol dehydrogenase (CAD5) mRNA, complete cds Length = 1074 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 924 ctcctctgtctccttcatgctccctatgaagctccccgt 886
>gb|AY113919.1| Arabidopsis thaliana putative cinnamyl alcohol dehydrogenase (At4g34230) mRNA, complete cds Length = 1105 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 924 ctcctctgtctccttcatgctccctatgaagctccccgt 886
>gb|AY034919.1| Arabidopsis thaliana putative cinnamyl alcohol dehydrogenase (At4g34230) mRNA, complete cds Length = 1306 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 977 ctcctctgtctccttcatgctccctatgaagctccccgt 939
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 32744 ctcctctgtctccttcatgctccctatgaagctccccgt 32782
>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project) Length = 114367 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 24226 ctcctctgtctccttcatgctccctatgaagctccccgt 24264
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project) Length = 94091 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 90556 ctcctctgtctccttcatgctccctatgaagctccccgt 90594
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 ccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgag 276 |||||||||||||| || |||||||| | ||||||||| | |||||| Sbjct: 13947972 ccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgag 13947926 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgtt 267 |||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 13932446 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgtt 13932488 Score = 44.1 bits (22), Expect = 0.43 Identities = 76/94 (80%) Strand = Plus / Minus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctcga 284 |||| ||||| ||||||| || ||||||||||| || ||||| ||| |||| ||| | Sbjct: 13941682 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 13941623 Query: 285 gcgcctggttgacgtaatccatcttgacgacctc 318 |||| ||||||||| |||||||||| |||||| Sbjct: 13941622 tcgccgtgttgacgtagtccatcttgatgacctc 13941589 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ctaggttgctcccggcgacg 238 |||||||||||||||||||| Sbjct: 10253759 ctaggttgctcccggcgacg 10253740
>emb|BX827559.1|CNS0A4CK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS73ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1285 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgt 399 |||||| ||||| | ||||||||| |||||||||||||| Sbjct: 964 ctcctctgtctccttcatgctccctatgaagctccccgt 926
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 ccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgag 276 |||||||||||||| || |||||||| | ||||||||| | |||||| Sbjct: 101649 ccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgag 101603 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgtt 267 |||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 86123 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgtt 86165 Score = 44.1 bits (22), Expect = 0.43 Identities = 76/94 (80%) Strand = Plus / Minus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctcga 284 |||| ||||| ||||||| || ||||||||||| || ||||| ||| |||| ||| | Sbjct: 95359 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 95300 Query: 285 gcgcctggttgacgtaatccatcttgacgacctc 318 |||| ||||||||| |||||||||| |||||| Sbjct: 95299 tcgccgtgttgacgtagtccatcttgatgacctc 95266
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 ccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgag 276 |||||||||||||| || |||||||| | ||||||||| | |||||| Sbjct: 50446 ccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgag 50400 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgtt 267 |||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 34920 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgtt 34962 Score = 44.1 bits (22), Expect = 0.43 Identities = 76/94 (80%) Strand = Plus / Minus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctcga 284 |||| ||||| ||||||| || ||||||||||| || ||||| ||| |||| ||| | Sbjct: 44156 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 44097 Query: 285 gcgcctggttgacgtaatccatcttgacgacctc 318 |||| ||||||||| |||||||||| |||||| Sbjct: 44096 tcgccgtgttgacgtagtccatcttgatgacctc 44063
>dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A05, full insert sequence Length = 1084 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgtt 267 |||| ||||||||||||| || ||||||||||| |||||||| Sbjct: 32 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgtt 74
>emb|X75480.1|EGCAD E.gunnii CAD gene Length = 5265 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/54 (85%) Strand = Plus / Minus Query: 271 ctcgagcctctcgagcgcctggttgacgtaatccatcttgacgacctcgatctg 324 |||||||||||| || ||| |||||| ||||||||||||| || |||||||| Sbjct: 4784 ctcgagcctctctagggccgtgttgacataatccatcttgatcacttcgatctg 4731
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 273 cgagcctctcgagcgcctggttgacg 298 |||| ||||||||||||||||||||| Sbjct: 3047115 cgaggctctcgagcgcctggttgacg 3047090
>gb|DQ124039.1| Coffea arabica clone MN-SSH2-D02 mRNA sequence Length = 709 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 389 aagctccccgtgatggtcttcctccccagcatcaccattggg 430 ||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct: 137 aagcttcccgtgatggttttccttcctagcataaccattggg 178
>emb|AJ295837.1|PTR295837 Populus balsamifera subsp. trichocarpa cad gene for cinnamyl alcohol dehydrogenase, exons 1-5 Length = 3065 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Minus Query: 361 ctcctccgtctcgtccatgctcccgatgaagctccccgtgat 402 |||||| ||||| | ||||||||| ||||||||||| ||||| Sbjct: 2696 ctcctctgtctccttcatgctccctatgaagctcccggtgat 2655
>gb|AF294793.1|AF294793 Eucalyptus saligna cinnamyl alcohol dehydrogenase (cad) gene, complete cds Length = 2259 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/54 (85%) Strand = Plus / Minus Query: 271 ctcgagcctctcgagcgcctggttgacgtaatccatcttgacgacctcgatctg 324 |||||||||||| || ||| |||||| ||||||||||||| || |||||||| Sbjct: 2202 ctcgagcctctctagggccgtgttgacataatccatcttgatcacttcgatctg 2149
>gb|AF109157.1|AF109157 Eucalyptus globulus cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1080 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/54 (85%) Strand = Plus / Minus Query: 271 ctcgagcctctcgagcgcctggttgacgtaatccatcttgacgacctcgatctg 324 |||||||||||| || ||| |||||| ||||||||||||| || |||||||| Sbjct: 879 ctcgagcctctctagggccgtgttgacataatccatcttgatcacttcgatctg 826
>dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096I15, full insert sequence Length = 1916 Score = 44.1 bits (22), Expect = 0.43 Identities = 76/94 (80%) Strand = Plus / Minus Query: 225 tgctcccggcgacgtcgacaacaaagcggtagcgcacgtcgttgcgctcgagcctctcga 284 |||| ||||| ||||||| || ||||||||||| || ||||| ||| |||| ||| | Sbjct: 1672 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 1613 Query: 285 gcgcctggttgacgtaatccatcttgacgacctc 318 |||| ||||||||| |||||||||| |||||| Sbjct: 1612 tcgccgtgttgacgtagtccatcttgatgacctc 1579
>gb|AY769938.1| Acacia mangium x Acacia auriculiformis cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1346 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Minus Query: 377 atgctcccgatgaagctccccgtgatggtcttcctccccagcatcaccat 426 |||||||| |||||||| || || || ||||||||||| ||||| ||||| Sbjct: 982 atgctccctatgaagcttcctgttatcgtcttcctcccaagcatgaccat 933
>dbj|D16624.1|EGCCAD Eucalyptus botryoides Cad1:Eb:1 gene for cinnamyl alcohol dehydrogenase, complete cds Length = 3288 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/54 (85%) Strand = Plus / Minus Query: 271 ctcgagcctctcgagcgcctggttgacgtaatccatcttgacgacctcgatctg 324 |||||||||||| || ||| |||||| ||||||||||||| || |||||||| Sbjct: 2730 ctcgagcctctctagggccgtgttgacataatccatcttgatcacttcgatctg 2677
>dbj|D86590.1| Zinnia elegans mRNA for cinnamyl alcohol dehydrogenase, partial cds Length = 1106 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 292 gttgacgtaatccatcttgacgacctcgat 321 ||||| ||||||||||||||| |||||||| Sbjct: 883 gttgatgtaatccatcttgaccacctcgat 854
>emb|AL626774.23| Mouse DNA sequence from clone RP23-198O15 on chromosome 4, complete sequence Length = 181545 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 tcttcctccccagcatcacca 425 ||||||||||||||||||||| Sbjct: 46897 tcttcctccccagcatcacca 46877
>ref|NM_111034.2| Arabidopsis thaliana unknown protein AT3G01680 mRNA, complete cds Length = 2542 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tcagcacgagcttgccgtcc 484 |||||||||||||||||||| Sbjct: 500 tcagcacgagcttgccgtcc 481
>ref|XM_474988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 aagcggtagcgcacgtcgttgcgc 271 ||||||||||| |||||||||||| Sbjct: 1049 aagcggtagcggacgtcgttgcgc 1026
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 tcacgcccatcagcacgagc 475 |||||||||||||||||||| Sbjct: 1038117 tcacgcccatcagcacgagc 1038136
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tgaagctccccgtgatggtc 406 |||||||||||||||||||| Sbjct: 269830 tgaagctccccgtgatggtc 269849
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tcagcacgagcttgccgtcc 484 |||||||||||||||||||| Sbjct: 74894 tcagcacgagcttgccgtcc 74875
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 451 cgcgatcacgcccatcagcacgagcttg 478 |||||||||| |||||||||||| |||| Sbjct: 4425698 cgcgatcacgaccatcagcacgatcttg 4425725
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 cccatcagcacgagcttgcc 480 |||||||||||||||||||| Sbjct: 305457 cccatcagcacgagcttgcc 305438
>gb|BT008325.1| Arabidopsis thaliana At3g01680 gene, complete cds Length = 2223 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tcagcacgagcttgccgtcc 484 |||||||||||||||||||| Sbjct: 448 tcagcacgagcttgccgtcc 429
>gb|AF472591.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD1) mRNA, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 cgtaatccatcttgacgacctcga 320 |||| ||||||||||||||||||| Sbjct: 1000 cgtagtccatcttgacgacctcga 977
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 aagcggtagcgcacgtcgttgcgc 271 ||||||||||| |||||||||||| Sbjct: 8595513 aagcggtagcggacgtcgttgcgc 8595536
>emb|BX824503.1|CNS0A7DE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2421 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tcagcacgagcttgccgtcc 484 |||||||||||||||||||| Sbjct: 486 tcagcacgagcttgccgtcc 467
>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_A10 Length = 95161 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ctaggttgctcccggcgacg 238 |||||||||||||||||||| Sbjct: 54908 ctaggttgctcccggcgacg 54889
>dbj|AK099270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021L06, full insert sequence Length = 1355 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 aagcggtagcgcacgtcgttgcgc 271 ||||||||||| |||||||||||| Sbjct: 1145 aagcggtagcggacgtcgttgcgc 1122
>dbj|AK071484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M10, full insert sequence Length = 1378 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 aagcggtagcgcacgtcgttgcgc 271 ||||||||||| |||||||||||| Sbjct: 1148 aagcggtagcggacgtcgttgcgc 1125
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 aagcggtagcgcacgtcgttgcgc 271 ||||||||||| |||||||||||| Sbjct: 55956 aagcggtagcggacgtcgttgcgc 55979 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,553,670 Number of Sequences: 3902068 Number of extensions: 2553670 Number of successful extensions: 49854 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 49365 Number of HSP's gapped (non-prelim): 491 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)