Clone Name | rbart06b02 |
---|---|
Clone Library Name | barley_pub |
>CAKI_DROME (Q24210) Calcium/calmodulin-dependent protein kinase (EC 2.7.11.17)| (CAKI) (Peripheral plasma membrane protein CaMGUK) Length = 898 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 313 LHGGRIYRSRGTSVGDSLVSVAGQSRQHRS 224 +HGG I+R VGD + + GQ QH+S Sbjct: 524 MHGGMIHRQATLHVGDEIREINGQPVQHQS 553
>P2SAF_ARATH (O82660) Photosystem II stability/assembly factor HCF136,| chloroplast precursor Length = 403 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 331 GNLWCNLHGGRIYRSRGTSVGDSLVSVAGQSR 236 G LW + GG +Y S+GT + + V QSR Sbjct: 300 GGLWLLVRGGGLYLSKGTGITEEFEEVPVQSR 331
>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1239 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +2 Query: 293 VDPSTMKVAPQISSSSAGTAVTLFLGFSYDLRPPRAFQ*KQPCGKGA 433 +DP ++++P S+GT VT +GFS D P A + + P KG+ Sbjct: 860 IDPRLLQISP-----SSGTTVTSVVGFSCDGMRPEAIR-QDPTRKGS 900
>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1233 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +2 Query: 293 VDPSTMKVAPQISSSSAGTAVTLFLGFSYDLRPPRAFQ*KQPCGKGA 433 +DP ++++P S+GT VT +GFS D P A + + P KG+ Sbjct: 854 IDPRLLQISP-----SSGTTVTSVVGFSCDGLRPEAIR-QDPTRKGS 894
>EFTS_RHOPA (P61338) Elongation factor Ts (EF-Ts)| Length = 308 Score = 28.5 bits (62), Expect = 7.6 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +1 Query: 241 FAQRRKQENLLLKCRENG-RSFHHEGCTTDFLLICRHSGHLVLGILVRLEASXGVPVE 411 + Q+ K EN++ K ENG ++++ E C + I G V + E G P++ Sbjct: 220 YRQQGKPENMIEKIVENGLKTYYKEVCLLEQAYIHDEKGKSVAQAVKEAEGKVGAPIK 277
>ADA2B_PROHA (O19054) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 389 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 375 ENPKNKVTAVPADEEEICGATFMV-EGSTVLAALQ*EILLFPSLGKAG 235 E ++ +VPA CG +GS VLA L+ ++LL +G AG Sbjct: 287 EEEGSRPLSVPASPASACGPHLQQPQGSQVLATLRGQVLLGRGVGAAG 334
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2 Query: 426 FPQGCFYWNALGGLKSYENPKNKVTAVPADEEE 328 FP G FY + LGG K + NP +VP+ E Sbjct: 173 FPPGHFYSSKLGGFKQWYNPPWFNESVPSTPYE 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,116,774 Number of Sequences: 219361 Number of extensions: 975097 Number of successful extensions: 2575 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2487 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2575 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)