Clone Name | rbart06b01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CYB_PTEQU (Q9B0Y1) Cytochrome b | 29 | 4.1 | 2 | CYB_PTEPR (Q9B365) Cytochrome b | 29 | 4.1 | 3 | CYB_PTEMA (Q9B106) Cytochrome b | 29 | 4.1 | 4 | CYB_PTEGY (Q9B0S2) Cytochrome b | 29 | 4.1 | 5 | CYB_PTEDV (Q9B1N0) Cytochrome b | 29 | 4.1 | 6 | DNJ5_CAEEL (Q09446) DnaJ homolog dnj-5 (DnaJ domain protein 5) | 28 | 9.0 |
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>CYB_PTEQU (Q9B0Y1) Cytochrome b| Length = 379 Score = 28.9 bits (63), Expect = 4.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 68 TTDSHPFGLPPDPSMVPYVP 9 T S+P G+P DP MVP+ P Sbjct: 203 TGSSNPTGIPSDPDMVPFHP 222
>CYB_PTEPR (Q9B365) Cytochrome b| Length = 379 Score = 28.9 bits (63), Expect = 4.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 68 TTDSHPFGLPPDPSMVPYVP 9 T S+P G+P DP MVP+ P Sbjct: 203 TGSSNPTGIPSDPDMVPFHP 222
>CYB_PTEMA (Q9B106) Cytochrome b| Length = 379 Score = 28.9 bits (63), Expect = 4.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 68 TTDSHPFGLPPDPSMVPYVP 9 T S+P G+P DP MVP+ P Sbjct: 203 TGSSNPTGIPSDPDMVPFHP 222
>CYB_PTEGY (Q9B0S2) Cytochrome b| Length = 379 Score = 28.9 bits (63), Expect = 4.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 68 TTDSHPFGLPPDPSMVPYVP 9 T S+P G+P DP MVP+ P Sbjct: 203 TGSSNPTGIPSDPDMVPFHP 222
>CYB_PTEDV (Q9B1N0) Cytochrome b| Length = 379 Score = 28.9 bits (63), Expect = 4.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 68 TTDSHPFGLPPDPSMVPYVP 9 T S+P G+P DP MVP+ P Sbjct: 203 TGSSNPTGIPSDPDMVPFHP 222
>DNJ5_CAEEL (Q09446) DnaJ homolog dnj-5 (DnaJ domain protein 5)| Length = 915 Score = 27.7 bits (60), Expect = 9.0 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -3 Query: 146 HPASKKGLWPHAFHFHNFNPETENQVTTDSHPFGLPPDPSMVPYVPSR 3 HP+S+ + H H H + V +H FG PP P + + P+R Sbjct: 138 HPSSQVHHFHHNLHHHTHT----HNVQVQNHYFGAPP-PGLESFGPTR 180 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,386,443 Number of Sequences: 219361 Number of extensions: 509930 Number of successful extensions: 1947 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1920 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1946 length of database: 80,573,946 effective HSP length: 26 effective length of database: 74,870,560 effective search space used: 1796893440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)