>gb|AC132356.3| Mus musculus BAC clone RP24-119I6 from 1, complete sequence
          Length = 184142

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 54    acaagatgatgatggtggatgg 75
             ||||||||||||||||||||||
Sbjct: 48141 acaagatgatgatggtggatgg 48162

>emb|AL031176.8|HS124K22 Human DNA sequence from clone RP1-124K22 on chromosome Xq23, complete
             sequence
          Length = 108994

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    aagcagaaaaataaggattaa 108
             |||||||||||||||||||||
Sbjct: 38185 aagcagaaaaataaggattaa 38165

>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     gaagcagaaaaataaggatt 106
              ||||||||||||||||||||
Sbjct: 123773 gaagcagaaaaataaggatt 123792

>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     gaagcagaaaaataaggatt 106
              ||||||||||||||||||||
Sbjct: 118471 gaagcagaaaaataaggatt 118490

>emb|AL138997.18| Human DNA sequence from clone RP11-10O23 on chromosome 13 Contains a
              hepatocyte nuclear factor 4 alpha (HNF4A) pseudogene,
              complete sequence
          Length = 172342

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     cagaaaaataaggattaatt 110
              ||||||||||||||||||||
Sbjct: 109826 cagaaaaataaggattaatt 109807

>emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in linkage group 5, complete
              sequence
          Length = 184144

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ctgtacaagatgatgatggt 69
              ||||||||||||||||||||
Sbjct: 110740 ctgtacaagatgatgatggt 110721



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ctgtacaagatgatgatggt 69
              ||||||||||||||||||||
Sbjct: 110648 ctgtacaagatgatgatggt 110629

>gb|AF283320.1|AF283320S1 Homo sapiens low density lipoprotein receptor-related protein 5 (LRP5)
             gene, exons 1 through 9
          Length = 122056

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    ggtggatggtgtcaagcttc 86
             ||||||||||||||||||||
Sbjct: 16248 ggtggatggtgtcaagcttc 16229

>dbj|AP002813.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-856M9, complete
              sequence
          Length = 187516

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     ggtggatggtgtcaagcttc 86
              ||||||||||||||||||||
Sbjct: 170371 ggtggatggtgtcaagcttc 170352

>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     gaagcagaaaaataaggatt 106
              ||||||||||||||||||||
Sbjct: 323589 gaagcagaaaaataaggatt 323570

>dbj|AP002366.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-142N13, complete
             sequence
          Length = 198720

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    ggtggatggtgtcaagcttc 86
             ||||||||||||||||||||
Sbjct: 36053 ggtggatggtgtcaagcttc 36034

>ref|XM_463825.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1914

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 53  tacaagatgatgatggtgg 71
           |||||||||||||||||||
Sbjct: 343 tacaagatgatgatggtgg 361

>ref|XM_463826.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2277

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 53  tacaagatgatgatggtgg 71
           |||||||||||||||||||
Sbjct: 616 tacaagatgatgatggtgg 634

>ref|NM_196545.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0053G13.19), mRNA
          Length = 3840

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tgatgatggtggatggtgt 78
           |||||||||||||||||||
Sbjct: 959 tgatgatggtggatggtgt 977

>gb|AY433459.1| Aedes aegypti ASAP ID: 42899 putative: sugar binding mRNA sequence
          Length = 655

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 94  aaaaataaggattaattct 112
           |||||||||||||||||||
Sbjct: 513 aaaaataaggattaattct 531

>emb|AL355989.11| Human DNA sequence from clone RP11-272J7 on chromosome 10 Contains a
             transcription elongation factor B (SIII) pseudogene, a
             novel gene, a heterogeneous nuclear ribonucleoprotein A3
             (HNRPA3) pseudogene gene and a CpG island, complete
             sequence
          Length = 161451

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 152   ctatgtcctcctccctcct 170
             |||||||||||||||||||
Sbjct: 90837 ctatgtcctcctccctcct 90819

>emb|AL669915.8| Mouse DNA sequence from clone RP23-13B21 on chromosome 11 no genes,
             complete sequence
          Length = 193440

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 152   ctatgtcctcctccctcct 170
             |||||||||||||||||||
Sbjct: 36057 ctatgtcctcctccctcct 36039

>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the
             gene for a novel protein (3732413I11Rik), a novel gene
             (4930597A21Rik), the 5' end of the Ebf1 gene for early
             B-cell factor 1, a novel gene and a CpG island, complete
             sequence
          Length = 215524

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 49    tctgtacaagatgatgatggtgg 71
             |||| ||||||||||||||||||
Sbjct: 67893 tctggacaagatgatgatggtgg 67871

>gb|AC091160.6| Homo sapiens chromosome 8, clone CTD-2025J6, complete sequence
          Length = 215326

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     ggtggatggtgtcaagctt 85
              |||||||||||||||||||
Sbjct: 165004 ggtggatggtgtcaagctt 165022

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 60       tgatgatggtggatggtgt 78
                |||||||||||||||||||
Sbjct: 14385832 tgatgatggtggatggtgt 14385814

>gb|AC009345.7|AC009345 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone
              BACR28F20, complete sequence
          Length = 158895

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     tcgctctttattaaaatgc 28
              |||||||||||||||||||
Sbjct: 117665 tcgctctttattaaaatgc 117683

>gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-group) chromosome 10 clone
           nbxb0075H14, complete sequence
          Length = 155420

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 60  tgatgatggtggatggtgt 78
           |||||||||||||||||||
Sbjct: 195 tgatgatggtggatggtgt 177

>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13,
              complete sequence
          Length = 138245

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     tgatgatggtggatggtgt 78
              |||||||||||||||||||
Sbjct: 133107 tgatgatggtggatggtgt 133089

>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone
             BACR14L13, complete sequence
          Length = 197348

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    tcgctctttattaaaatgc 28
             |||||||||||||||||||
Sbjct: 20880 tcgctctttattaaaatgc 20898

>gb|AC128708.8| Homo sapiens 12 BAC RP11-714L1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 102748

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    cgctctttattaaaatgct 29
             |||||||||||||||||||
Sbjct: 25599 cgctctttattaaaatgct 25581

>dbj|AK119359.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-G05, full
           insert sequence
          Length = 2971

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tgatgatggtggatggtgt 78
           |||||||||||||||||||
Sbjct: 711 tgatgatggtggatggtgt 729

>dbj|AB049406.1| Eustoma grandiflorum mRNA for expansin, partial cds
          Length = 660

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 59  atgatgatggtggatggtg 77
           |||||||||||||||||||
Sbjct: 254 atgatgatggtggatggtg 272

>dbj|AK099755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A22, full
           insert sequence
          Length = 2277

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 53  tacaagatgatgatggtgg 71
           |||||||||||||||||||
Sbjct: 616 tacaagatgatgatggtgg 634

>dbj|AK061840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E02, full
           insert sequence
          Length = 1914

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 53  tacaagatgatgatggtgg 71
           |||||||||||||||||||
Sbjct: 343 tacaagatgatgatggtgg 361

>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 87     gaagcagaaaaataaggat 105
              |||||||||||||||||||
Sbjct: 144312 gaagcagaaaaataaggat 144294

>gb|AE003764.3| Drosophila melanogaster chromosome 3R, section 102 of 118 of the complete
              sequence
          Length = 231455

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     tcgctctttattaaaatgc 28
              |||||||||||||||||||
Sbjct: 227954 tcgctctttattaaaatgc 227972

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 60       tgatgatggtggatggtgt 78
                |||||||||||||||||||
Sbjct: 14394074 tgatgatggtggatggtgt 14394056

>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence
          Length = 189521

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 87     gaagcagaaaaataaggat 105
              |||||||||||||||||||
Sbjct: 125533 gaagcagaaaaataaggat 125551


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,897,519
Number of Sequences: 3902068
Number of extensions: 1897519
Number of successful extensions: 144407
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144189
Number of HSP's gapped (non-prelim): 218
length of query: 170
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 148
effective length of database: 17,147,199,772
effective search space: 2537785566256
effective search space used: 2537785566256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)