ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet99g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SIR2_CANGA (Q6FWI7) NAD-dependent histone deacetylase SIR2 (EC 3... 28 6.9

>SIR2_CANGA (Q6FWI7) NAD-dependent histone deacetylase SIR2 (EC 3.5.1.-)|
           (Regulatory protein SIR2) (Silent information regulator
           2)
          Length = 509

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 153 APLASGVGMIYIYM-SVKYMQDSVQHIQDDTFASGFCNRMLSLSSQCFRW 7
           AP++  V MI  Y+  V   +D V+H + D    GFC+ + ++ +Q   W
Sbjct: 426 APVSEIVNMIPAYVPQVLINKDPVKHAEFDIELLGFCDDVATVVAQKCEW 475


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,297,484
Number of Sequences: 219361
Number of extensions: 383369
Number of successful extensions: 1029
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 80,573,946
effective HSP length: 29
effective length of database: 74,212,477
effective search space used: 1781099448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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