ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet99g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLF_HUMAN (Q13129) Zinc finger protein Rlf (Rearranged L-myc fus... 28 8.4

>RLF_HUMAN (Q13129) Zinc finger protein Rlf (Rearranged L-myc fusion gene|
            protein) (Zn-15-related protein)
          Length = 1914

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 181  AALQHHMSMNKAQEQWSIQISIYQHLKRVFK-YVHQQSMRASTHVTVELSISH 26
            A L H++  +   ++  +Q++++QH    F+ ++ Q+S    TH+ +     H
Sbjct: 1143 ALLMHYLKKHNYSKEKVLQLTMFQHRYSPFQCHICQRSFTRKTHLRIHYKNKH 1195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,276,790
Number of Sequences: 219361
Number of extensions: 540805
Number of successful extensions: 932
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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