Clone Name | rbaet99f11 |
---|---|
Clone Library Name | barley_pub |
>emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b Length = 755 Score = 222 bits (112), Expect = 2e-55 Identities = 115/116 (99%) Strand = Plus / Minus Query: 13 tactattcattaattgcctgaacaggtaggtcagacacatcacacatacacatcggctaa 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tactattcattaattgcctgaacaggtaggtcagacacatcacacatacacatcggctaa 696 Query: 73 agtacggcaaggagatgactgttcagtcactcatacggacgcgtgcatgcatgccg 128 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 agtacagcaaggagatgactgttcagtcactcatacggacgcgtgcatgcatgccg 640
>emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA Length = 660 Score = 157 bits (79), Expect = 1e-35 Identities = 82/83 (98%) Strand = Plus / Minus Query: 46 gacacatcacacatacacatcggctaaagtacggcaaggagatgactgttcagtcactca 105 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 660 gacacatcacacatacacatcggctaaagtacagcaaggagatgactgttcagtcactca 601 Query: 106 tacggacgcgtgcatgcatgccg 128 ||||||||||||||||||||||| Sbjct: 600 tacggacgcgtgcatgcatgccg 578
>emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific lipid transfer protein precursor (ltp9.4b gene) Length = 776 Score = 109 bits (55), Expect = 2e-21 Identities = 109/127 (85%), Gaps = 5/127 (3%) Strand = Plus / Minus Query: 4 gaaaataattactattcattaattgcctgaacaggtaggtcagacacatcacacatacac 63 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| Sbjct: 771 gaaaataattactattcattaattgcctgaacaagtaggtcaggcacatcacacgtacac 712 Query: 64 atcgg-----ctaaagtacggcaaggagatgactgttcagtcactcatacggacgcgtgc 118 ||||| || ||||| |||| ||| |||| ||||| |||| ||||||||||| ||| Sbjct: 711 atcgggttacatagagtacagcaaagagttgacagttcactcacgcatacggacgcatgc 652 Query: 119 atgcatg 125 || |||| Sbjct: 651 atacatg 645
>emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.4 gene) Length = 771 Score = 101 bits (51), Expect = 5e-19 Identities = 60/63 (95%) Strand = Plus / Minus Query: 4 gaaaataattactattcattaattgcctgaacaggtaggtcagacacatcacacatacac 63 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| Sbjct: 768 gaaaataattactattcattaattgcctgaacaagtaggtcaggcacatcacacgtacac 709 Query: 64 atc 66 ||| Sbjct: 708 atc 706
>emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non specific lipid transfer protein precursor, exons 1-2 Length = 1965 Score = 79.8 bits (40), Expect = 2e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 15 ctattcattaattgcctgaacaggtaggtcagacacatcacacatacacatc 66 |||||||||||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 1965 ctattcattaattgcctgaacaagtaggtcaggcacatcacacgtacacatc 1914
>dbj|AB090308.2| Bombyx mori Bmtitin1, Bmtitin2, Bmmiple, Bmsyx6, BmPM-Scl, Bmtkz, BmubcD4 genes, partial and complete cds Length = 159777 Score = 44.1 bits (22), Expect = 0.10 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 aaaataattactattcattaat 26 |||||||||||||||||||||| Sbjct: 159647 aaaataattactattcattaat 159626
>gb|AC126598.13| Mus musculus chromosome 5, clone RP24-486L9, complete sequence Length = 168471 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 98893 acacatcacacatacacatc 98874
>gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, complete sequence Length = 177860 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 105924 acacatcacacatacacatc 105943 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 106080 acacatcacacatacacat 106098 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 105650 acacatcacacatacacat 105668
>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence Length = 193076 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 157887 acacatcacacatacacatc 157906 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 158043 acacatcacacatacacat 158061 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 157613 acacatcacacatacacat 157631
>gb|AC161108.2| Mus musculus chromosome 1, clone RP23-224G12, complete sequence Length = 207067 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 102490 acacatcacacatacacatc 102509
>gb|AC113039.10| Mus musculus chromosome 1, clone RP23-229P20, complete sequence Length = 172732 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 95955 acacatcacacatacacatc 95936
>gb|AC111059.9| Mus musculus chromosome 15, clone RP24-495D8, complete sequence Length = 124519 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 agacacatcacacatacaca 64 |||||||||||||||||||| Sbjct: 90175 agacacatcacacatacaca 90194
>gb|AC140209.2| Mus musculus BAC clone RP24-472D23 from chromosome 15, complete sequence Length = 175802 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 agacacatcacacatacaca 64 |||||||||||||||||||| Sbjct: 114993 agacacatcacacatacaca 114974
>gb|AC159197.3| Mus musculus BAC clone RP23-421P10 from chromosome 12, complete sequence Length = 188400 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 168921 acacatcacacatacacatc 168902
>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence Length = 234420 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 84118 acacatcacacatacacatc 84099
>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete sequence Length = 217752 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 147971 acacatcacacatacacatc 147952
>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188451 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 140301 acacatcacacatacacatc 140320
>gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence Length = 170587 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 106287 acacatcacacatacacatc 106268
>emb|AL390856.9| Human DNA sequence from clone GS1-122H1 on chromosome 1q25.1-25.3 Contains two novel genes (LOC400799) and a yippee protein pseudogene, complete sequence Length = 143714 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 agacacatcacacatacaca 64 |||||||||||||||||||| Sbjct: 114018 agacacatcacacatacaca 114037
>emb|AL355300.9| Human DNA sequence from clone RP11-810B23 on chromosome 10 Contains a novel gene, complete sequence Length = 141456 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 cacacatacacatcggctaaagta 76 |||||||||||||||| ||||||| Sbjct: 77261 cacacatacacatcggataaagta 77284
>emb|AL109754.13|HSDJ839B4 Human DNA sequence from clone RP5-839B4 on chromosome 20 Contains the 3' end of a novel gene, part of a novel gene, the ANKRD5 gene for ankyrin repeat domain 5 and a CpG island, complete sequence Length = 165010 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 aagaaaataattactattcattaa 25 |||||||| ||||||||||||||| Sbjct: 124795 aagaaaatcattactattcattaa 124772
>gb|AC165283.2| Mus musculus BAC clone RP24-348M18 from chromosome 12, complete sequence Length = 171825 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 4003 acacatcacacatacacatc 3984
>emb|CR391969.13| Zebrafish DNA sequence from clone CH211-131C14 in linkage group 5, complete sequence Length = 159249 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 acacatcacacatacacatcggct 70 ||||||||||||||||| |||||| Sbjct: 76552 acacatcacacatacacttcggct 76529
>emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 in linkage group 5, complete sequence Length = 142908 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 acacatcacacatacacatcggct 70 ||||||||||||||||| |||||| Sbjct: 44080 acacatcacacatacacttcggct 44103
>ref|XM_684703.1| PREDICTED: Danio rerio similar to mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase (LOC561300), partial mRNA Length = 2182 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 acacatcacacatacacatcggct 70 ||||||||||||||||| |||||| Sbjct: 1552 acacatcacacatacacttcggct 1575
>ref|XM_683534.1| PREDICTED: Danio rerio similar to Alpha-mannosidase II (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (Mannosidase alpha class 2A member 1) (LOC560144), mRNA Length = 840 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 acacatcacacatacacatcggct 70 ||||||||||||||||| |||||| Sbjct: 378 acacatcacacatacacttcggct 401
>gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173752 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 agatgactgttcagtcactc 104 |||||||||||||||||||| Sbjct: 171875 agatgactgttcagtcactc 171856
>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete sequence Length = 147533 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cagacacatcacacatacac 63 |||||||||||||||||||| Sbjct: 105385 cagacacatcacacatacac 105404
>gb|AC155638.3| Mus musculus 10 BAC RP24-223J19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160577 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 agatgactgttcagtcactc 104 |||||||||||||||||||| Sbjct: 20301 agatgactgttcagtcactc 20282
>gb|AC115820.11| Mus musculus chromosome 8, clone RP23-479K9, complete sequence Length = 185977 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacatc 66 |||||||||||||||||||| Sbjct: 99912 acacatcacacatacacatc 99893
>gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomic sequence, complete sequence Length = 122358 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tcagacacatcacacataca 62 |||||||||||||||||||| Sbjct: 21756 tcagacacatcacacataca 21775
>gb|AC119804.12| Mus musculus chromosome 7, clone RP23-144D10, complete sequence Length = 208232 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 75230 acacatcacacatacacat 75248
>gb|AC151347.2| Xenopus tropicalis clone ISB-394A6, complete sequence Length = 78040 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 taattactattcattaatt 27 ||||||||||||||||||| Sbjct: 55738 taattactattcattaatt 55756
>gb|AC159322.2| Mus musculus BAC clone RP23-33M5 from chromosome 8, complete sequence Length = 225520 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 159614 acacatcacacatacacat 159596
>gb|AC155825.2| Mus musculus BAC clone RP23-54D15 from chromosome 16, complete sequence Length = 192183 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 138543 acacatcacacatacacat 138561
>gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosome 3, complete sequence Length = 211699 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 42 gtcagacacatcacacatacaca 64 ||||||||||||||||| ||||| Sbjct: 61841 gtcagacacatcacacacacaca 61863
>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence Length = 242587 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaataattactattcatt 23 ||||||||||||||||||| Sbjct: 128209 aaaataattactattcatt 128227
>gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosome 17, complete sequence Length = 211631 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 116902 acacatcacacatacacat 116884
>gb|AC114908.9| Mus musculus chromosome 3, clone RP24-173L8, complete sequence Length = 145363 Score = 38.2 bits (19), Expect = 6.2 Identities = 25/27 (92%) Strand = Plus / Plus Query: 39 taggtcagacacatcacacatacacat 65 ||||||| ||| ||||||||||||||| Sbjct: 30910 taggtcatacatatcacacatacacat 30936
>gb|AC150524.3| Bos taurus BAC CH240-89P8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 189720 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aaaataattactattcattaatt 27 ||||||||||||||||| ||||| Sbjct: 179550 aaaataattactattcagtaatt 179572
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 taattactattcattaatt 27 ||||||||||||||||||| Sbjct: 115701 taattactattcattaatt 115683
>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence Length = 203574 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 cagacacatcacacataca 62 ||||||||||||||||||| Sbjct: 84132 cagacacatcacacataca 84114
>gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, complete sequence Length = 153627 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 43 tcagacacatcacacatacacat 65 ||||||||| ||||||||||||| Sbjct: 138267 tcagacacaacacacatacacat 138289
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 gaaaataattactattcat 22 ||||||||||||||||||| Sbjct: 153542 gaaaataattactattcat 153524
>gb|AC186002.3| Pan troglodytes BAC clone CH251-86D23 from chromosome 9, complete sequence Length = 162651 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 cagacacatcacacataca 62 ||||||||||||||||||| Sbjct: 13632 cagacacatcacacataca 13614
>gb|AC132462.4| Mus musculus BAC clone RP23-35F22 from chromosome 7, complete sequence Length = 194641 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gaaaataattactattcat 22 ||||||||||||||||||| Sbjct: 62333 gaaaataattactattcat 62351
>gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosome 7, complete sequence Length = 217912 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 cagacacatcacacataca 62 ||||||||||||||||||| Sbjct: 74688 cagacacatcacacataca 74670
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 acggacgcgtgcatgcatg 125 ||||||||||||||||||| Sbjct: 31213610 acggacgcgtgcatgcatg 31213592
>gb|AC158347.4| Mus musculus chromosome 3, clone RP23-380F8, complete sequence Length = 193489 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 69440 acacatcacacatacacat 69458
>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence Length = 184296 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 aattactattcattaattg 28 ||||||||||||||||||| Sbjct: 96575 aattactattcattaattg 96593
>gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, complete sequence Length = 162617 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 55123 acacatcacacatacacat 55141
>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence Length = 222814 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 55903 acacatcacacatacacat 55921
>gb|AC121939.3| Mus musculus BAC clone RP24-208M2 from chromosome 2, complete sequence Length = 153093 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 68828 acacatcacacatacacat 68846
>gb|AC122522.4| Mus musculus BAC clone RP24-486D23 from chromosome 5, complete sequence Length = 186083 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 58260 acacatcacacatacacat 58242
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence Length = 182835 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 93091 acacatcacacatacacat 93109
>gb|AC125038.4| Mus musculus BAC clone RP23-333P7 from chromosome 5, complete sequence Length = 198463 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 43 tcagacacatcacacatacacat 65 ||||||||||||||| ||||||| Sbjct: 156255 tcagacacatcacacttacacat 156277
>emb|CR956396.6| Pig DNA sequence from clone CH242-205N12 on chromosome 7, complete sequence Length = 175108 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 42 gtcagacacatcacacatacaca 64 |||||| |||||||||||||||| Sbjct: 152290 gtcagagacatcacacatacaca 152268
>gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, complete sequence Length = 157262 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 aattactattcattaattg 28 ||||||||||||||||||| Sbjct: 27767 aattactattcattaattg 27785
>gb|AC127431.1| Mus musculus BAC clone RP24-481H21 from 7, complete sequence Length = 166978 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gaaaataattactattcat 22 ||||||||||||||||||| Sbjct: 136123 gaaaataattactattcat 136141
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 gacacatcacacatacaca 64 ||||||||||||||||||| Sbjct: 164085 gacacatcacacatacaca 164103
>ref|XM_721525.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06038) partial mRNA Length = 3462 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 1702 aaagaaaataattactatt 1684
>gb|AC120000.17| Mus musculus chromosome 3, clone RP24-133F9, complete sequence Length = 149389 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 42 gtcagacacatcacacatacaca 64 ||||||||||||||||| ||||| Sbjct: 78702 gtcagacacatcacacacacaca 78680
>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080 Length = 340000 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 14923 acacatcacacatacacat 14905
>emb|AL445430.15| Human DNA sequence from clone RP11-716O23 on chromosome 6 Contains one or two novel genes, a repressor of protein-kinase (interferon-inducible double stranded RNA dependent inhibitor) (P58 repressor) (PRKRIR) pseudogene and a CpG island, complete sequence Length = 127862 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 22731 acacatcacacatacacat 22749
>gb|AC026231.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-114F4, complete sequence Length = 208199 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 135120 acacatcacacatacacat 135102
>emb|AL160033.21| Human DNA sequence from clone RP11-480K16 on chromosome 13 Contains the 5' end of a novel gene, a novel gene, the 3' end of the TUBGCP3 gene for tubulin gamma complex associated protein 3 and two CpG islands, complete sequence Length = 182362 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 35172 acacatcacacatacacat 35154 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 34923 acacatcacacatacacat 34905
>emb|AL096855.48|HS1115A15 Human DNA sequence from clone RP5-1115A15 on chromosome 1p36.11-36.31 Contains part of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (KIAA0458, FLJ38775), a novel gene and a CpG island, complete sequence Length = 178403 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 43881 aaagaaaataattactatt 43899
>gb|AC127789.4| Rattus norvegicus 1 BAC CH230-15M17 (Children's Hospital Oakland Research Institute) complete sequence Length = 240825 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 95745 acacatcacacatacacat 95727
>emb|AL713960.17| Mouse DNA sequence from clone RP23-448I9 on chromosome 11 Contains the 5' end of the Car10 gene for carbonic anhydrase 10 and one CpG island, complete sequence Length = 203449 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 49322 acacatcacacatacacat 49340
>emb|AL929002.4| Mouse DNA sequence from clone RP23-369A3 on chromosome 11, complete sequence Length = 50526 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 40960 acacatcacacatacacat 40978
>emb|AL645643.7| Mouse DNA sequence from clone RP23-253F13 on chromosome 13 Contains part of the Gmds gene for GDP-mannose 4, 6-dehydratase, complete sequence Length = 185384 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 30126 acacatcacacatacacat 30108
>emb|BX571974.6| Zebrafish DNA sequence from clone DKEY-29P4 in linkage group 12, complete sequence Length = 267018 Score = 38.2 bits (19), Expect = 6.2 Identities = 25/27 (92%) Strand = Plus / Minus Query: 1 aaagaaaataattactattcattaatt 27 |||||||||||||| ||||||| |||| Sbjct: 121254 aaagaaaataattattattcatgaatt 121228
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 aattactattcattaattg 28 ||||||||||||||||||| Sbjct: 211330 aattactattcattaattg 211312
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete sequence Length = 264534 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aaaataattactattcatt 23 ||||||||||||||||||| Sbjct: 188176 aaaataattactattcatt 188158
>gb|AC067745.7| Homo sapiens chromosome 10 clone RP11-417C21, complete sequence Length = 156140 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 70313 acacatcacacatacacat 70331
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 acggacgcgtgcatgcatg 125 ||||||||||||||||||| Sbjct: 20851 acggacgcgtgcatgcatg 20833
>gb|AC106755.2| Homo sapiens chromosome 5 clone RP11-188E14, complete sequence Length = 86871 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 34367 aaagaaaataattactatt 34349
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aaaataattactattcattaatt 27 |||||||||||||| |||||||| Sbjct: 730143 aaaataattactatacattaatt 730165
>gb|AC008880.6| Homo sapiens chromosome 5 clone CTD-2210P10, complete sequence Length = 105975 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 26191 acacatcacacatacacat 26173
>dbj|AK040131.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430068E20 product:unclassifiable, full insert sequence Length = 3899 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 2271 acacatcacacatacacat 2253
>gb|AC117816.11| Mus musculus chromosome 19, clone RP24-573C13, complete sequence Length = 168728 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 7195 acacatcacacatacacat 7177
>gb|AC136735.7| Mus musculus chromosome 3, clone RP23-175G2, complete sequence Length = 182455 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 27454 acacatcacacatacacat 27436
>gb|AC091074.3|AC091074 Homo sapiens chromosome 15 clone RP11-640I2 map 15q21.1, complete sequence Length = 161083 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 98139 aaagaaaataattactatt 98157
>gb|AC020599.4|AC020599 Homo sapiens BAC clone RP11-440L13 from 4, complete sequence Length = 173821 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 agaaaataattactattca 21 ||||||||||||||||||| Sbjct: 130375 agaaaataattactattca 130357
>emb|BX248388.8| Zebrafish DNA sequence from clone CH211-239E16 in linkage group 16, complete sequence Length = 58638 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 24474 acacatcacacatacacat 24492
>gb|AC084807.12|AC084807 Arabidopsis thaliana chromosome 1 BAC T18F15 genomic sequence, complete sequence Length = 81704 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aaaataattactattcattaatt 27 ||||||||||||||| ||||||| Sbjct: 48749 aaaataattactattgattaatt 48771
>ref|XM_397101.2| PREDICTED: Apis mellifera similar to CG32344-PA (LOC413660), mRNA Length = 2784 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 2350 aaagaaaataattactatt 2368
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 taattactattcattaatt 27 ||||||||||||||||||| Sbjct: 23779663 taattactattcattaatt 23779645 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 gaaaataattactattcat 22 ||||||||||||||||||| Sbjct: 18574227 gaaaataattactattcat 18574209
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 acggacgcgtgcatgcatg 125 ||||||||||||||||||| Sbjct: 31304126 acggacgcgtgcatgcatg 31304108
>emb|AL845547.18| Mouse DNA sequence from clone RP23-296A4 on chromosome 2, complete sequence Length = 187738 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 130524 acacatcacacatacacat 130542
>gb|AC105755.4| Homo sapiens BAC clone RP11-46H14 from 4, complete sequence Length = 145673 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 cagacacatcacacataca 62 ||||||||||||||||||| Sbjct: 19412 cagacacatcacacataca 19430
>gb|AC007009.2|AC007009 Homo sapiens BAC clone RP11-560C1 from 7p22-p21, complete sequence Length = 152523 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 43 tcagacacatcacacatacacat 65 ||||||||| ||||||||||||| Sbjct: 73412 tcagacacaacacacatacacat 73434
>gb|AE014848.1| Plasmodium falciparum 3D7 chromosome 12, section 5 of 9 of the complete sequence Length = 250707 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 aaataattactattcatta 24 ||||||||||||||||||| Sbjct: 63659 aaataattactattcatta 63677
>gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, complete sequence Length = 192490 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 gacacatcacacatacaca 64 ||||||||||||||||||| Sbjct: 67234 gacacatcacacatacaca 67216
>gb|AF191069.1|AF191069 Homo sapiens chromosome 21 clone P704-682K20 map 21q22.1, complete sequence Length = 108965 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 72353 aaagaaaataattactatt 72335
>gb|AF096876.1|AF096876 Homo sapiens chromosome 21q22.1 PAC K09209, complete sequence Length = 109864 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 50478 aaagaaaataattactatt 50460
>gb|AC157908.5| Mus musculus chromosome 18, clone RP24-286P2, complete sequence Length = 161561 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aaaataattactattcatt 23 ||||||||||||||||||| Sbjct: 5471 aaaataattactattcatt 5453
>emb|BX663494.4| Zebrafish DNA sequence from clone CH211-234N7 in linkage group 18, complete sequence Length = 150365 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aaaataattactattcattaatt 27 ||||||||||||||| ||||||| Sbjct: 142997 aaaataattactattaattaatt 143019
>dbj|BS000177.1| Pan troglodytes chromosome 22 clone:PTB-118H03, map 22, complete sequences Length = 267172 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 141492 aaagaaaataattactatt 141474
>dbj|AK108604.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G01, full insert sequence Length = 997 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 acggacgcgtgcatgcatg 125 ||||||||||||||||||| Sbjct: 823 acggacgcgtgcatgcatg 841
>emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in linkage group 18, complete sequence Length = 263615 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aaaataattactattcattaatt 27 ||||||||||||||| ||||||| Sbjct: 237600 aaaataattactattaattaatt 237622
>gb|AC055754.21| Homo sapiens 3 BAC RP11-4I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157354 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 aaggagatgactgttcagt 99 ||||||||||||||||||| Sbjct: 37493 aaggagatgactgttcagt 37475
>emb|AL954226.2|PTB126M21 Pan troglodytes chromosome 22 BAC PTB-126M21, complete sequence Length = 188320 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 58905 acacatcacacatacacat 58887
>dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, section 51/105 Length = 340000 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaagaaaataattactatt 19 ||||||||||||||||||| Sbjct: 98946 aaagaaaataattactatt 98928
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 taattactattcattaatt 27 ||||||||||||||||||| Sbjct: 24091332 taattactattcattaatt 24091314 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 gaaaataattactattcat 22 ||||||||||||||||||| Sbjct: 18733628 gaaaataattactattcat 18733610
>gb|AC170869.2| Mus musculus BAC clone RP24-370B22 from chromosome 3, complete sequence Length = 143247 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 86065 acacatcacacatacacat 86047
>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence Length = 195371 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 163018 acacatcacacatacacat 163036
>gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complete sequence Length = 177652 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 169562 acacatcacacatacacat 169544
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence Length = 173574 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 20432 acacatcacacatacacat 20414
>emb|AJ010735.1|ATAJ10735 Arabidopsis thaliana gr1 gene Length = 8030 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aaaataattactattcattaatt 27 ||||||||||||||| ||||||| Sbjct: 1316 aaaataattactattgattaatt 1338
>dbj|AP001029.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-861E21, complete sequence Length = 209897 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 74146 acacatcacacatacacat 74128
>gb|AC153632.2| Mus musculus 6 BAC RP23-450O1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182517 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 107072 acacatcacacatacacat 107054
>gb|DQ279079.1| Chlamydomonas reinhardtii PhoA (PHOA) mRNA, complete cds; nuclear gene for plastid product Length = 2619 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 acggcaaggagatgactgt 94 ||||||||||||||||||| Sbjct: 722 acggcaaggagatgactgt 740
>emb|AL772285.9| Mouse DNA sequence from clone RP23-76I24 on chromosome 4, complete sequence Length = 153899 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 79647 acacatcacacatacacat 79629
>emb|AL831752.7| Mouse DNA sequence from clone RP23-414J22 on chromosome X, complete sequence Length = 169807 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 35359 acacatcacacatacacat 35377
>emb|AL928710.6| Mouse DNA sequence from clone RP23-255P20 on chromosome 2, complete sequence Length = 180748 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 93543 acacatcacacatacacat 93561
>gb|AF121897.4| Homo sapiens chromosome 21 clone RP1-160L9 map 21q22.2, complete sequence Length = 132088 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 18409 acacatcacacatacacat 18391
>emb|AL669905.14| Mouse DNA sequence from clone RP23-110H24 on chromosome 4, complete sequence Length = 138217 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acacatcacacatacacat 65 ||||||||||||||||||| Sbjct: 122816 acacatcacacatacacat 122798 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,690,226 Number of Sequences: 3902068 Number of extensions: 1690226 Number of successful extensions: 151027 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 150250 Number of HSP's gapped (non-prelim): 777 length of query: 132 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 111 effective length of database: 17,151,101,840 effective search space: 1903772304240 effective search space used: 1903772304240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)