>PCD10_HUMAN (Q9P2E7) Protocadherin-10 precursor|
          Length = 1040

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = -2

Query: 215 RPKQANSLLSYNMVSCQVHFISLFTFV 135
           R + AN+ L+Y+++ CQ+  +S+FT+V
Sbjct: 490 RDEGANAQLAYSILECQIQGMSVFTYV 516

>RN139_MOUSE (Q7TMV1) RING finger protein 139|
          Length = 668

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 156 YFPFYFCSACVCVLSLQLELTLYEYYNHKSTTTTFG*GACKLRLCIK 16
           +FP  F SAC+ +L + L   L+ +Y     T  F   A  + LC+K
Sbjct: 389 HFPVLFVSACLFILPVLLSYVLWHHY--ALNTWLFAVTAFCVELCLK 433

>RN139_HUMAN (Q8WU17) RING finger protein 139 (Translocation in renal carcinoma|
           on chromosome 8)
          Length = 664

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 156 YFPFYFCSACVCVLSLQLELTLYEYYNHKSTTTTFG*GACKLRLCIK 16
           +FP  F SAC+ +L + L   L+ +Y     T  F   A  + LC+K
Sbjct: 389 HFPVLFVSACLFILPVLLSYVLWHHY--ALNTWLFAVTAFCVELCLK 433


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,994,091
Number of Sequences: 219361
Number of extensions: 427769
Number of successful extensions: 958
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)