Clone Name | rbaet99f08 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme... | 64 | 7e-11 | 2 | DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme... | 33 | 0.24 | 3 | DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme... | 29 | 2.6 | 4 | SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog | 28 | 5.9 |
---|
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 64.3 bits (155), Expect = 7e-11 Identities = 32/36 (88%), Positives = 34/36 (94%), Gaps = 2/36 (5%) Frame = -1 Query: 304 VESGHPLVKEGKLANLLAWRAEEDSLEE--GAVLCE 203 VESGHPLVKEGKLANLLAWRAEE+SLEE GA+LCE Sbjct: 358 VESGHPLVKEGKLANLLAWRAEEESLEEGTGALLCE 393
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 32.7 bits (73), Expect = 0.24 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = -1 Query: 289 PLVKEGKLANLLAWRAEEDSLEEGA 215 P+ K+ KLANLL W E D++EE A Sbjct: 371 PMKKDYKLANLLCWEEEADAMEEKA 395
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = -1 Query: 283 VKEGKLANLLAWRAEEDSLEE 221 VKEGKL NLL W ED+LEE Sbjct: 373 VKEGKLGNLLPW--GEDALEE 391
>SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog| Length = 713 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 295 GHPLVKEGKLANLLAWRAEEDSLEEGAV 212 G P+ + N+ +W A +DS+ EGAV Sbjct: 270 GSPVASVARQKNISSWLASQDSVPEGAV 297 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,177,350 Number of Sequences: 219361 Number of extensions: 539181 Number of successful extensions: 1396 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1386 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1396 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)