ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet99f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464730.1| Oryza sativa (japonica cultivar-group), mRNA 66 7e-08
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
3dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
4dbj|AK119200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
5dbj|AK099890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
6dbj|AK060799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
7gb|BT016556.1| Zea mays clone Contig389 mRNA sequence 56 7e-05
8gb|AY106804.1| Zea mays PCO072181 mRNA sequence 56 7e-05
9emb|Z85996.1|HS431A14 Human DNA sequence from clone RP3-431A14 o... 42 1.1
10gb|DQ083604.1| Influenza A virus (A/chicken/Bangkok/Thailand/CU-... 42 1.1
11dbj|AK124222.1| Homo sapiens cDNA FLJ42228 fis, clone THYMU2041252 42 1.1
12gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, comp... 42 1.1
13gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, compl... 42 1.1
14gb|AY660557.1| Influenza A virus (A/chicken/Nakorn-Patom/Thailan... 42 1.1
15gb|AY651455.1| Influenza A virus (A/Ck/Viet Nam/C57/2004(H5N1)) ... 42 1.1
16emb|AL353778.13| Human DNA sequence from clone RP11-317P15 on ch... 42 1.1
17gb|AY818142.1| Influenza A virus (A/chicken/Vietnam/C58/04(H5N1)... 42 1.1
18ref|XM_450934.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
19gb|AC004891.1| Homo sapiens PAC clone RP4-800L12 from 7, complet... 40 4.3
20ref|XM_445898.1| Candida glabrata CBS138, CAGL0E04840g partial mRNA 40 4.3
21gb|AC024475.15| Homo sapiens chromosome 11, clone RP11-702F3, co... 40 4.3
22gb|AC142340.1| Pan troglodytes BAC clone RP43-43B11 from 7, comp... 40 4.3
23emb|AL135791.12| Human DNA sequence from clone RP11-162G10 on ch... 40 4.3
24emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C2... 40 4.3
25emb|CR380951.1| Candida glabrata strain CBS138 chromosome E comp... 40 4.3
26gb|DQ397608.1| Cenarchaeum symbiosum clone C12B02, complete sequ... 40 4.3
27gb|DQ397607.1| Cenarchaeum symbiosum clone C12A09, complete sequ... 40 4.3
28gb|DQ397585.1| Cenarchaeum symbiosum clone C20G08, complete sequ... 40 4.3
29gb|AC007638.8| Homo sapiens chromosome 17, clone RP11-515O17, co... 40 4.3
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
31gb|AC007217.5| Homo sapiens chromosome 16 clone RP11-167B4, comp... 40 4.3
32gb|AC009303.3| Homo sapiens BAC clone RP11-98C1 from 2, complete... 40 4.3
33gb|AC025420.26| Homo sapiens 12 BAC RP11-491C17 (Roswell Park Ca... 40 4.3
34dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
35gb|L14835.1|MZEWUSB Zea mays (clone wusl1032) mRNA sequence 40 4.3
36dbj|AP001180.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 4.3
37dbj|AP005117.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 4.3 
>ref|XM_464730.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1394

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                        
Query: 211  cgcaggtgcggcggcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaata 270
            |||||| ||||  |||||||| |||||||| |||||||  | ||| ||||||||| ||||
Sbjct: 1194 cgcaggggcggaagcagattggtcctgggaggcagcagcagttgtagcttcagtagaata 1135

                                                                 
Query: 271  agcagtaggctgcccatagctaccagtagcataaggatcaccgtatgactgct 323
             || | ||||||||| ||||| ||| |  ||||||||||||| || |||||||
Sbjct: 1134 tgcggcaggctgcccgtagcttccactgccataaggatcaccataggactgct 1082
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                           
Query: 211     cgcaggtgcggcggcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaata 270
               |||||| ||||  |||||||| |||||||| |||||||  | ||| ||||||||| ||||
Sbjct: 6983791 cgcaggggcggaagcagattggtcctgggaggcagcagcagttgtagcttcagtagaata 6983732

                                                                    
Query: 271     agcagtaggctgcccatagctaccagtagcataaggatcaccgtatgactgct 323
                || | ||||||||| ||||| ||| |  ||||||||||||| || |||||||
Sbjct: 6983731 tgcggcaggctgcccgtagcttccactgccataaggatcaccataggactgct 6983679
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>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470A03
          Length = 133167

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                         
Query: 211   cgcaggtgcggcggcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaata 270
             |||||| ||||  |||||||| |||||||| |||||||  | ||| ||||||||| ||||
Sbjct: 77413 cgcaggggcggaagcagattggtcctgggaggcagcagcagttgtagcttcagtagaata 77354

                                                                  
Query: 271   agcagtaggctgcccatagctaccagtagcataaggatcaccgtatgactgct 323
              || | ||||||||| ||||| ||| |  ||||||||||||| || |||||||
Sbjct: 77353 tgcggcaggctgcccgtagcttccactgccataaggatcaccataggactgct 77301
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>dbj|AK119200.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D03, full
           insert sequence
          Length = 697

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                       
Query: 211 cgcaggtgcggcggcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaata 270
           |||||| ||||  |||||||| |||||||| |||||||  | ||| ||||||||| ||||
Sbjct: 521 cgcaggggcggaagcagattggtcctgggaggcagcagcagttgtagcttcagtagaata 462

                                                                
Query: 271 agcagtaggctgcccatagctaccagtagcataaggatcaccgtatgactgct 323
            || | ||||||||| ||||| ||| |  ||||||||||||| || |||||||
Sbjct: 461 tgcggcaggctgcccgtagcttccactgccataaggatcaccataggactgct 409
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>dbj|AK099890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112P20, full
            insert sequence
          Length = 1393

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                        
Query: 211  cgcaggtgcggcggcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaata 270
            |||||| ||||  |||||||| |||||||| |||||||  | ||| ||||||||| ||||
Sbjct: 1193 cgcaggggcggaagcagattggtcctgggaggcagcagcagttgtagcttcagtagaata 1134

                                                                 
Query: 271  agcagtaggctgcccatagctaccagtagcataaggatcaccgtatgactgct 323
             || | ||||||||| ||||| ||| |  ||||||||||||| || |||||||
Sbjct: 1133 tgcggcaggctgcccgtagcttccactgccataaggatcaccataggactgct 1081
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>dbj|AK060799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F03, full
            insert sequence
          Length = 1769

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                        
Query: 211  cgcaggtgcggcggcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaata 270
            |||||| ||||  |||||||| |||||||| |||||||  | ||| ||||||||| ||||
Sbjct: 1537 cgcaggggcggaagcagattggtcctgggaggcagcagcagttgtagcttcagtagaata 1478

                                                                 
Query: 271  agcagtaggctgcccatagctaccagtagcataaggatcaccgtatgactgct 323
             || | ||||||||| ||||| ||| |  ||||||||||||| || |||||||
Sbjct: 1477 tgcggcaggctgcccgtagcttccactgccataaggatcaccataggactgct 1425
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>gb|BT016556.1| Zea mays clone Contig389 mRNA sequence
          Length = 1669

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 224  gcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaataagcagtaggctgc 283
            ||||| ||||||||||| |||||||| | ||| ||||||||| | || || | |||||||
Sbjct: 1123 gcagagtgatcctgggatgcagcaggaggtgttgcttcagtagagtaggctggaggctgc 1064

                    
Query: 284  ccatagct 291
            ||||||||
Sbjct: 1063 ccatagct 1056
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>gb|AY106804.1| Zea mays PCO072181 mRNA sequence
          Length = 1609

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 224  gcagattgatcctgggacgcagcaggtgctgtggcttcagtaaaataagcagtaggctgc 283
            ||||| ||||||||||| |||||||| | ||| ||||||||| | || || | |||||||
Sbjct: 1317 gcagagtgatcctgggatgcagcaggaggtgttgcttcagtagagtaggctggaggctgc 1258

                    
Query: 284  ccatagct 291
            ||||||||
Sbjct: 1257 ccatagct 1250
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>emb|Z85996.1|HS431A14 Human DNA sequence from clone RP3-431A14 on chromosome 6p21 Contains
             the CDKN1A gene for cyclin-dependent kinase inhibitor 1A,
             the gene for a novel protein similar to ras family
             protein, the gene for a novel copine-like protein
             (KIA1599), a galanin receptor pseudogene, the 3' end of
             the PPIL1 gene for peptidylprolyl isomerase protein and 2
             CpG islands, complete sequence
          Length = 195364

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   gctgcccatagctaccagtag 299
             |||||||||||||||||||||
Sbjct: 79385 gctgcccatagctaccagtag 79365
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>gb|DQ083604.1| Influenza A virus (A/chicken/Bangkok/Thailand/CU-20/04(H5N1))
           neuraminidase (NA) gene, partial cds
          Length = 1319

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 251 gctgtggcttcagtaaaataagcag 275
           ||||||||||||||||||| |||||
Sbjct: 175 gctgtggcttcagtaaaattagcag 199
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>dbj|AK124222.1| Homo sapiens cDNA FLJ42228 fis, clone THYMU2041252
          Length = 2182

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 279  gctgcccatagctaccagtag 299
            |||||||||||||||||||||
Sbjct: 1529 gctgcccatagctaccagtag 1549
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>gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, complete sequence
          Length = 157402

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     gataataatatagcaatatat 36
              |||||||||||||||||||||
Sbjct: 123235 gataataatatagcaatatat 123255
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>gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, complete sequence
          Length = 159956

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    gataataatatagcaatatat 36
             |||||||||||||||||||||
Sbjct: 83506 gataataatatagcaatatat 83486
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>gb|AY660557.1| Influenza A virus
           (A/chicken/Nakorn-Patom/Thailand/CU-K3/2004(H5N1))
           neuraminidase gene, partial cds
          Length = 1330

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 251 gctgtggcttcagtaaaataagcag 275
           ||||||||||||||||||| |||||
Sbjct: 153 gctgtggcttcagtaaaattagcag 177
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>gb|AY651455.1| Influenza A virus (A/Ck/Viet Nam/C57/2004(H5N1)) neuramindase (NA)
           gene, complete cds
          Length = 1350

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 251 gctgtggcttcagtaaaataagcag 275
           ||||||||||||||||||| |||||
Sbjct: 175 gctgtggcttcagtaaaattagcag 199
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>emb|AL353778.13| Human DNA sequence from clone RP11-317P15 on chromosome 1q25.2-31.2
             Contains the RGS16 gene for a regulator of G-protein
             signalling 16, the RGS8 gene for a regulator of G-protein
             signalling 8 and a CpG island, complete sequence
          Length = 147047

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 253   tgtggcttcagtaaaataagc 273
             |||||||||||||||||||||
Sbjct: 84429 tgtggcttcagtaaaataagc 84449
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>gb|AY818142.1| Influenza A virus (A/chicken/Vietnam/C58/04(H5N1)) neuraminidase NA
           gene, complete cds
          Length = 1350

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 251 gctgtggcttcagtaaaataagcag 275
           ||||||||||||||||||| |||||
Sbjct: 175 gctgtggcttcagtaaaattagcag 199
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>ref|XM_450934.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 ggagcggcagctgctgtggt 207
           ||||||||||||||||||||
Sbjct: 50  ggagcggcagctgctgtggt 69
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>gb|AC004891.1| Homo sapiens PAC clone RP4-800L12 from 7, complete sequence
          Length = 112621

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tcaaatgcagctgaggcagg 140
             ||||||||||||||||||||
Sbjct: 37021 tcaaatgcagctgaggcagg 37002
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>ref|XM_445898.1| Candida glabrata CBS138, CAGL0E04840g partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 13  agggataataatatagcaatatat 36
           |||||||||||||||| |||||||
Sbjct: 631 agggataataatatagaaatatat 654
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>gb|AC024475.15| Homo sapiens chromosome 11, clone RP11-702F3, complete sequence
          Length = 191960

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gcaaaacagggataataata 25
             ||||||||||||||||||||
Sbjct: 15512 gcaaaacagggataataata 15493
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>gb|AC142340.1| Pan troglodytes BAC clone RP43-43B11 from 7, complete sequence
          Length = 173662

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    tcaaatgcagctgaggcagg 140
              ||||||||||||||||||||
Sbjct: 138219 tcaaatgcagctgaggcagg 138200
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>emb|AL135791.12| Human DNA sequence from clone RP11-162G10 on chromosome 10 Contains
            the gene for a novel Kruppel-type zinc finger protein
            (LOC57209), a tousled-like kinase 1 (TLK1)(KIAA0137,
            PKU-BETA) pseudogene, a zinc finger protein pseudogene, a
            novel gene and a CpG island, complete sequence
          Length = 66975

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    aaaacagggataataatata 27
            ||||||||||||||||||||
Sbjct: 2908 aaaacagggataataatata 2889
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>emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C21 on chromosome 1p22.2-31.1
             Contains STSs and GSSs, complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gcaaaacagggataataata 25
             ||||||||||||||||||||
Sbjct: 79619 gcaaaacagggataataata 79600
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>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence
          Length = 687501

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 13     agggataataatatagcaatatat 36
              |||||||||||||||| |||||||
Sbjct: 464737 agggataataatatagaaatatat 464760
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>gb|DQ397608.1| Cenarchaeum symbiosum clone C12B02, complete sequence
          Length = 36797

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  cggcggcagattgatcctgg 238
            ||||||||||||||||||||
Sbjct: 5424 cggcggcagattgatcctgg 5443
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>gb|DQ397607.1| Cenarchaeum symbiosum clone C12A09, complete sequence
          Length = 38974

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   cggcggcagattgatcctgg 238
             ||||||||||||||||||||
Sbjct: 38934 cggcggcagattgatcctgg 38915
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>gb|DQ397585.1| Cenarchaeum symbiosum clone C20G08, complete sequence
          Length = 40803

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  cggcggcagattgatcctgg 238
            ||||||||||||||||||||
Sbjct: 1203 cggcggcagattgatcctgg 1184
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>gb|AC007638.8| Homo sapiens chromosome 17, clone RP11-515O17, complete sequence
          Length = 182051

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     gcaaaacagggataataata 25
             ||||||||||||||||||||
Sbjct: 76510 gcaaaacagggataataata 76529
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      ggagcggcagctgctgtggt 207
                ||||||||||||||||||||
Sbjct: 17674635 ggagcggcagctgctgtggt 17674654
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>gb|AC007217.5| Homo sapiens chromosome 16 clone RP11-167B4, complete sequence
          Length = 173929

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    ttcaaatgcagctgaggcag 139
              ||||||||||||||||||||
Sbjct: 136371 ttcaaatgcagctgaggcag 136390
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>gb|AC009303.3| Homo sapiens BAC clone RP11-98C1 from 2, complete sequence
          Length = 198652

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aaaacagggataataatata 27
              ||||||||||||||||||||
Sbjct: 118526 aaaacagggataataatata 118545
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>gb|AC025420.26| Homo sapiens 12 BAC RP11-491C17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 94145

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaaccagatttcaaatgcag 130
             ||||||||||||||||||||
Sbjct: 13224 aaaccagatttcaaatgcag 13205
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>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1005_D12
          Length = 150588

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    ggagcggcagctgctgtggt 207
              ||||||||||||||||||||
Sbjct: 123357 ggagcggcagctgctgtggt 123376
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>gb|L14835.1|MZEWUSB Zea mays (clone wusl1032) mRNA sequence
          Length = 943

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 95  agcagcagagccaaggaaac 114
           ||||||||||||||||||||
Sbjct: 879 agcagcagagccaaggaaac 898
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>dbj|AP001180.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-856M7, complete
              sequence
          Length = 108000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      gcaaaacagggataataata 25
              ||||||||||||||||||||
Sbjct: 105820 gcaaaacagggataataata 105839
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>dbj|AP005117.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-21G15, complete
           sequences
          Length = 148790

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   gcaaaacagggataataata 25
           ||||||||||||||||||||
Sbjct: 205 gcaaaacagggataataata 224


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,963,646
Number of Sequences: 3902068
Number of extensions: 3963646
Number of successful extensions: 77543
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77440
Number of HSP's gapped (non-prelim): 103
length of query: 323
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 301
effective length of database: 17,147,199,772
effective search space: 5161307131372
effective search space used: 5161307131372
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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