Clone Name | rbaet99e05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11 | 30 | 1.7 | 2 | K0232_HUMAN (Q92628) Protein KIAA0232 (Fragment) | 28 | 4.8 |
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>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11| Length = 319 Score = 30.0 bits (66), Expect = 1.7 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%) Frame = +2 Query: 185 HPYV-HDHTHIRCHTHTCS 238 H Y+ H HTH+ HTHTC+ Sbjct: 53 HSYLLHPHTHVCTHTHTCT 71
>K0232_HUMAN (Q92628) Protein KIAA0232 (Fragment)| Length = 1402 Score = 28.5 bits (62), Expect = 4.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 18 SHLLGKNQTLFHCLNENIEMTF*TLFQVRQQACTNEMCTFG*HTYQL 158 SHLL NQ LF +NE + + F V + C+N + F T L Sbjct: 632 SHLLAGNQELFSDINEGSGIN--SCFSVFEVQCSNSVLPFSFETLNL 676 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,647,929 Number of Sequences: 219361 Number of extensions: 644810 Number of successful extensions: 1393 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1195 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1366 length of database: 80,573,946 effective HSP length: 57 effective length of database: 68,070,369 effective search space used: 1633688856 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)