ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet99e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11 30 1.7
2K0232_HUMAN (Q92628) Protein KIAA0232 (Fragment) 28 4.8

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +2

Query: 185 HPYV-HDHTHIRCHTHTCS 238
           H Y+ H HTH+  HTHTC+
Sbjct: 53  HSYLLHPHTHVCTHTHTCT 71



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>K0232_HUMAN (Q92628) Protein KIAA0232 (Fragment)|
          Length = 1402

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 18  SHLLGKNQTLFHCLNENIEMTF*TLFQVRQQACTNEMCTFG*HTYQL 158
           SHLL  NQ LF  +NE   +   + F V +  C+N +  F   T  L
Sbjct: 632 SHLLAGNQELFSDINEGSGIN--SCFSVFEVQCSNSVLPFSFETLNL 676


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,647,929
Number of Sequences: 219361
Number of extensions: 644810
Number of successful extensions: 1393
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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