>PSAF_HORVU (P13192) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F)
          Length = 235

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 206 NGDLVVDDADIGY 168
           NGDLVVDDADIGY
Sbjct: 223 NGDLVVDDADIGY 235

>RDRP_MRNV (Q6XNL5) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
           replicase)
          Length = 1045

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 137 SRSQVRWAAEDEGLWCRSVWAWCRS**DHGEMEPLLYLRN 18
           S +QV +  +  G W   VW WC    D+GE    LYL+N
Sbjct: 217 SDNQVDYRVDGGGRWQHKVWNWC----DYGE---FLYLKN 249

>MADCA_HUMAN (Q13477) Mucosal addressin cell adhesion molecule 1 precursor|
           (MAdCAM-1) (hMAdCAM-1)
          Length = 406

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 11  GFSFLNTREVPFLHDPISSYTKPTQIDTTSPHPP 112
           G    + + +P LH P    T P   DTTSP PP
Sbjct: 212 GLELSHRQAIPVLHSP----TSPEPPDTTSPEPP 241

>YHBP_ECOL6 (Q8FD95) UPF0306 protein yhbP|
          Length = 140

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 164 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 78
           L A+  WLA +  V W  + EG LWC + +
Sbjct: 4   LTAISRWLAKQHVVTWCVQQEGELWCANAF 33

>YHBP_ECO57 (Q8XA94) UPF0306 protein yhbP|
          Length = 147

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 164 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 78
           L A+  WLA +  V W  + EG LWC + +
Sbjct: 4   LTAISRWLAKQHVVTWCVQQEGELWCANAF 33

>YHBP_SHIFL (P67763) UPF0306 protein yhbP|
          Length = 147

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 164 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 78
           L A+  WLA +  V W  + EG LWC + +
Sbjct: 4   LIAISRWLAKQHVVTWCVQQEGELWCANAF 33

>YHBP_ECOLI (P67762) UPF0306 protein yhbP|
          Length = 147

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 164 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 78
           L A+  WLA +  V W  + EG LWC + +
Sbjct: 4   LIAISRWLAKQHVVTWCVQQEGELWCANAF 33

>PPZ1_YEAST (P26570) Serine/threonine-protein phosphatase PP-Z1 (EC 3.1.3.16)|
          Length = 691

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 70  HQAHTDRHHKPSSSAAH 120
           H +HT+R+H PSSS +H
Sbjct: 79  HSSHTNRYHFPSSSHSH 95

>AGI_URTDI (P11218) Lectin/endochitinase precursor (EC 3.2.1.14)|
          (Agglutinin) (UDA)
          Length = 372

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 98 LWCRSVWAWCRS**DHGEMEP 36
          LWC S+W WC      G+ EP
Sbjct: 38 LWCCSIWGWC------GDSEP 52

>YHBP_SALTY (P60822) UPF0306 protein yhbP|
          Length = 147

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 164 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 78
           L A+  WLA +  V W    EG LWC + +
Sbjct: 4   LTAIGRWLAKQHVVTWCVHHEGELWCANAF 33

>YHBP_SALTI (P60821) UPF0306 protein yhbP|
          Length = 147

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 164 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 78
           L A+  WLA +  V W    EG LWC + +
Sbjct: 4   LTAIGRWLAKQHVVTWCVHHEGELWCANAF 33


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,490,545
Number of Sequences: 219361
Number of extensions: 560288
Number of successful extensions: 1786
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1783
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)