>emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for cp33Hv protein
          Length = 1311

 Score =  739 bits (373), Expect = 0.0
 Identities = 379/381 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3    tgaattcaacatgttttcatgaagcactttggatccagatatttctgcaacatatattac 62
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 tgaattcaacatgttttcatgaagcactttggatccagatatttctgcaacatatattac 1240

                                                                        
Query: 63   aagagtctaataataatctaatgtgcgtagctggaacccacttttgcgtcaaaattttcg 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 aagagtctaataataatctaatgtgcgtagctggaacccacttttgcgtcaaaattttcg 1180

                                                                        
Query: 123  ctcagaccagcacatcttgaattcgaacggcagaattttgtgaaccggtgccccaagctt 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 ctcagaccagcacatcttgaattcgaacggcagaattttgtgaaccggtgccccaagctt 1120

                                                                        
Query: 183  acaactgaatcatctctacctgtctattagtttttactaatagctggcagttgcctgtaa 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 acaactgaatcatctctacctgtctattagtttttactaatagctggcagttgcctgtaa 1060

                                                                        
Query: 243  gttgctcttttccatctcgcctccaaattgtcctgaagtactagtgttattgtcgacctg 302
            ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1059 gttgctcttttccatttcgcctccaaattgtcctgaagtaatagtgttattgtcgacctg 1000

                                                                        
Query: 303  tggctcagcctcagatccacgtgaggctgttttttcttgctgtgactgcgctgtgctagg 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999  tggctcagcctcagatccacgtgaggctgttttttcttgctgtgactgcgctgtgctagg 940

                                 
Query: 363  agttgatccagctggagggtt 383
            |||||||||||||||||||||
Sbjct: 939  agttgatccagctggagggtt 919

>emb|BX004804.10| Zebrafish DNA sequence from clone CH211-39M5 in linkage group 5, complete
              sequence
          Length = 170010

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 123    ctcagaccagcacatcttgaa 143
              |||||||||||||||||||||
Sbjct: 113160 ctcagaccagcacatcttgaa 113140

>emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in linkage group 5,
             complete sequence
          Length = 176078

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 123   ctcagaccagcacatcttgaa 143
             |||||||||||||||||||||
Sbjct: 25370 ctcagaccagcacatcttgaa 25350

>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence
          Length = 162232

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    ctgttttttcttgctgtgac 348
              ||||||||||||||||||||
Sbjct: 128498 ctgttttttcttgctgtgac 128517

>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete
             sequence
          Length = 145012

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    catgttttcatgaagcactt 31
             ||||||||||||||||||||
Sbjct: 87878 catgttttcatgaagcactt 87897

>gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complete sequence
          Length = 188207

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    ttttttcttgctgtgactgc 351
              ||||||||||||||||||||
Sbjct: 132379 ttttttcttgctgtgactgc 132360

>gb|AC006001.2| Homo sapiens PAC clone RP4-756H11 from 7, complete sequence
          Length = 135044

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   ttttttcttgctgtgactgc 351
             ||||||||||||||||||||
Sbjct: 26800 ttttttcttgctgtgactgc 26781

>gb|AC149307.17| Medicago truncatula clone mth2-91a15, complete sequence
          Length = 136553

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   cagcacatcttgaattcgaa 149
             ||||||||||||||||||||
Sbjct: 82221 cagcacatcttgaattcgaa 82240



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   cagcacatcttgaattcgaa 149
             ||||||||||||||||||||
Sbjct: 74649 cagcacatcttgaattcgaa 74668

>gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, complete sequence
          Length = 223952

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    tgctcttttccatctcgcct 264
              ||||||||||||||||||||
Sbjct: 124320 tgctcttttccatctcgcct 124339

>emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chromosome 13, complete
             sequence
          Length = 191856

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aattcaacatgttttcatga 24
             ||||||||||||||||||||
Sbjct: 20051 aattcaacatgttttcatga 20070

>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     catgaagcactttggatcca 39
              ||||||||||||||||||||
Sbjct: 239037 catgaagcactttggatcca 239018

>emb|CR786568.9| Zebrafish DNA sequence from clone DKEY-251I10 in linkage group 5,
             complete sequence
          Length = 134388

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atatttctgcaacatatatt 60
             ||||||||||||||||||||
Sbjct: 77940 atatttctgcaacatatatt 77921

>gb|AC012537.12| Homo sapiens chromosome 8, clone RP11-115A18, complete sequence
          Length = 157030

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   gttttttcttgctgtgactg 350
             ||||||||||||||||||||
Sbjct: 76198 gttttttcttgctgtgactg 76179

>gb|AC022182.8| Homo sapiens chromosome 8, clone RP11-174G1, complete sequence
          Length = 172420

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  gttttttcttgctgtgactg 350
            ||||||||||||||||||||
Sbjct: 3977 gttttttcttgctgtgactg 3996

>emb|BX950862.7| Zebrafish DNA sequence from clone CH211-194L2 in linkage group 22,
             complete sequence
          Length = 193558

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aagagtctaataataatcta 82
             ||||||||||||||||||||
Sbjct: 50379 aagagtctaataataatcta 50360

>gb|AC105015.3| Homo sapiens chromosome 8, clone RP11-589O3, complete sequence
          Length = 178520

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   gttttttcttgctgtgactg 350
             ||||||||||||||||||||
Sbjct: 55175 gttttttcttgctgtgactg 55156

>gb|AC116428.1| Homo sapiens chromosome 5 clone CTD-2587M2, complete sequence
          Length = 153204

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aattcaacatgttttcatga 24
             ||||||||||||||||||||
Sbjct: 20121 aattcaacatgttttcatga 20102

>gb|AC105343.4| Homo sapiens BAC clone RP11-423J7 from 4, complete sequence
          Length = 155217

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aattcaacatgttttcatga 24
              ||||||||||||||||||||
Sbjct: 146533 aattcaacatgttttcatga 146552

>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    tttttactaatagctggcag 232
              ||||||||||||||||||||
Sbjct: 147330 tttttactaatagctggcag 147311

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     ccaagcttacaactgaatca 194
               ||||||||||||||||||||
Sbjct: 2462233 ccaagcttacaactgaatca 2462252

>gb|AC145858.5| Pan troglodytes BAC clone RP43-6D19 from chromosome 7, complete sequence
          Length = 196528

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    ttttttcttgctgtgactgc 351
              ||||||||||||||||||||
Sbjct: 144586 ttttttcttgctgtgactgc 144567

>gb|AC108202.3| Homo sapiens BAC clone RP11-20M7 from 4, complete sequence
          Length = 154274

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aattcaacatgttttcatga 24
             ||||||||||||||||||||
Sbjct: 82183 aattcaacatgttttcatga 82202

>gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     atatattacaagagtctaat 73
              ||||||||||||||||||||
Sbjct: 124825 atatattacaagagtctaat 124844

>gb|AC106901.4| Homo sapiens BAC clone RP11-1178E6 from 2, complete sequence
          Length = 91323

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aattcaacatgttttcatga 24
             ||||||||||||||||||||
Sbjct: 53087 aattcaacatgttttcatga 53068

>gb|AC128737.4| Mus musculus BAC clone RP23-99A8 from chromosome unknown, complete
              sequence
          Length = 211960

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aattcaacatgttttcatga 24
              ||||||||||||||||||||
Sbjct: 195525 aattcaacatgttttcatga 195544

>gb|AC132343.3| Mus musculus BAC clone RP24-175J11 from chromosome unknown, complete
             sequence
          Length = 166197

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aattcaacatgttttcatga 24
             ||||||||||||||||||||
Sbjct: 35243 aattcaacatgttttcatga 35262

>gb|AC011421.2|AC011421 Homo sapiens chromosome 5 clone CTD-2303O5, complete sequence
          Length = 148142

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aattcaacatgttttcatga 24
             ||||||||||||||||||||
Sbjct: 35834 aattcaacatgttttcatga 35853

>emb|BX649615.6| Mouse DNA sequence from clone RP23-273I8 on chromosome X, complete
             sequence
          Length = 88938

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aattcaacatgttttcatga 24
             ||||||||||||||||||||
Sbjct: 38727 aattcaacatgttttcatga 38708

>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence
          Length = 168753

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   tagctggcagttgcctgtaa 242
             ||||||||||||||||||||
Sbjct: 16640 tagctggcagttgcctgtaa 16621

>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    ttactaatagctggcagttg 235
              ||||||||||||||||||||
Sbjct: 246694 ttactaatagctggcagttg 246713

>emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chromosome X, complete
             sequence
          Length = 181854

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   tgaatcatctctacctgtct 207
             ||||||||||||||||||||
Sbjct: 39221 tgaatcatctctacctgtct 39240

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     ccaagcttacaactgaatca 194
               ||||||||||||||||||||
Sbjct: 2306214 ccaagcttacaactgaatca 2306233

>emb|AJ342600.1|HSA342600 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-ND12C
          Length = 610

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 ttttttcttgctgtgactgc 351
           ||||||||||||||||||||
Sbjct: 605 ttttttcttgctgtgactgc 586


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,760,562
Number of Sequences: 3902068
Number of extensions: 3760562
Number of successful extensions: 65441
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65362
Number of HSP's gapped (non-prelim): 79
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)