ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet99d03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF055328.1|AF055328 Hordeum vulgare glucan endo-1,3-beta-glucosidase isoenzyme I (BHVG1) gene, complete cds Length = 3327 Score = 446 bits (225), Expect = e-122 Identities = 228/229 (99%) Strand = Plus / Minus Query: 92 gatctggttacacacttcactgctgcaatacgtccatgcatcttatttagggcgatatat 151 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3308 gatctggttacacacttcactgctgcaatacgtccatgcatcttatttaggccgatatat 3249 Query: 152 cgacgtgtacgtatatagtatccacgttacccttcactcctgcattatacgcagcttatt 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3248 cgacgtgtacgtatatagtatccacgttacccttcactcctgcattatacgcagcttatt 3189 Query: 212 tattactgtattaggttgacgtacgtacgcatgcacggacgacgctactggaaccggatg 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3188 tattactgtattaggttgacgtacgtacgcatgcacggacgacgctactggaaccggatg 3129 Query: 272 gggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3128 gggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcgg 3080
>gb|M96938.1|BLYGLCNHI Hordeum vulgare glucan endo-1,3-beta-glucosidase (isoenzyme I) mRNA, 3' end Length = 1025 Score = 313 bits (158), Expect = 2e-82 Identities = 158/158 (100%) Strand = Plus / Minus Query: 163 tatatagtatccacgttacccttcactcctgcattatacgcagcttatttattactgtat 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 tatatagtatccacgttacccttcactcctgcattatacgcagcttatttattactgtat 955 Query: 223 taggttgacgtacgtacgcatgcacggacgacgctactggaaccggatggggtacgccgg 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 taggttgacgtacgtacgcatgcacggacgacgctactggaaccggatggggtacgccgg 895 Query: 283 cgacttgtccgggttgaacagcccgaagtgcttctcgg 320 |||||||||||||||||||||||||||||||||||||| Sbjct: 894 cgacttgtccgggttgaacagcccgaagtgcttctcgg 857
>emb|AJ890250.1| Triticum aestivum partial mRNA for putative glucan endo-1,3-beta-D-glucosidase (wgluc5 gene) Length = 1242 Score = 119 bits (60), Expect = 6e-24 Identities = 185/221 (83%), Gaps = 18/221 (8%) Strand = Plus / Minus Query: 2 cctcaatatctttctctttattcatgacagacggcatag--caccacctgcaatggttgc 59 ||||||| || |||||||||||||||||||||| ||| ||||||||| |||||| || Sbjct: 1239 cctcaatttccttctctttattcatgacagacgatatataacaccacctggaatggtcgc 1180 Query: 60 act---cttgcatgaatcg-tgttatgacatgcattgatctggttacacacttcactgct 115 ||| ||||||||||||| |||| ||||||||| | || ||||||| ||||||||| Sbjct: 1179 actactcttgcatgaatcgatgttctgacatgcact---ctcgttacac--ttcactgct 1125 Query: 116 gcaatacgtccatgcatcttatttagggcga---tatatcgacgtgtacgtatatagtat 172 ||||||||| ||| |||||||||| || ||| ||||||||||||||||| ||| Sbjct: 1124 gcaatacgt----gcagcttatttaggctgacaatatgtcgacgtgtacgtatattgtac 1069 Query: 173 ccacgttacccttcactcctgcattatacgcagcttattta 213 ||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1068 ccacgttacacttcactcctgcactatacgcagcttattta 1028 Score = 113 bits (57), Expect = 4e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 260 tggaaccggatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcg 319 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 965 tggaactggatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcg 906 Query: 320 g 320 | Sbjct: 905 g 905
>gb|AY277385.1| Avena sativa 1,3-beta glucanase (Oglc13) gene, complete cds Length = 3281 Score = 105 bits (53), Expect = 9e-20 Identities = 53/53 (100%) Strand = Plus / Minus Query: 266 cggatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3156 cggatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 3104
>gb|AF155932.1| Avena sativa 1,3-beta glucanase (Oglc13) mRNA, partial cds Length = 1045 Score = 97.6 bits (49), Expect = 2e-17 Identities = 52/53 (98%) Strand = Plus / Minus Query: 266 cggatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 cggatggggtaggccggcgacttgtccgggttgaacagcccgaagtgcttctc 859
>gb|AF112967.1| Triticum aestivum beta-1,3-glucanase precursor (Glb3) mRNA, complete cds Length = 1439 Score = 79.8 bits (40), Expect = 5e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcg 319 |||||||||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 1071 gatggggtacgccggcgatttgtccgggttgaagagcccaaagtgcttctcg 1020
>gb|DQ147119.1| Zea diploperennis isolate d8 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1178 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1127 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1077
>gb|DQ147118.1| Zea diploperennis isolate d7 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1130 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1080
>gb|DQ147116.1| Zea diploperennis isolate d5 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1130 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1080
>gb|DQ147115.1| Zea diploperennis isolate d4 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1130 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1080
>gb|DQ147114.1| Zea diploperennis isolate d3 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1130 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1080
>gb|DQ147113.1| Zea diploperennis isolate d2 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1189 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1138 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1088
>gb|DQ147112.1| Zea diploperennis isolate d1 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1130 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1080
>gb|DQ147109.1| Zea mays subsp. parviglumis isolate p13 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1130 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1080
>gb|DQ147107.1| Zea mays subsp. parviglumis isolate p11 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1186 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1135 gatggggtacgccggcgatttgtccgggttgaagagcccgaagtgcctctc 1085
>emb|Y18212.1|TAY18212 Triticum aestivum mRNA for beta-1,3-endoglucanase Length = 1229 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 255 gctactggaaccggatggggtacgccggcgacttgtccgggttgaacagcccgaag 310 |||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 1034 gctacttgaactggatgttgtaggccggcgacttgtccgggttgaacagcccgaag 979
>emb|AJ295946.1|FPR295946 Festuca pratensis mRNA for Glu1 protein Length = 1224 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||||||||| |||||||||||| ||||||||||| Sbjct: 1057 gatggagtaggccggcgacttgtccgcgttgaacagcccaaagtgcttctc 1007
>gb|S82315.1| PRm 6b=1,3-beta-glucanase {clone CHEM 9} [Zea mays=maize, cv. INRA 258, mercuric chloride-treated, leaves, mRNA Partial, 1243 nt] Length = 1243 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1047 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 997
>gb|AY111675.1| Zea mays CL1243_1 mRNA sequence Length = 1272 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1068 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1018
>gb|DQ147117.1| Zea diploperennis isolate d6 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||||||| |||||||| |||||||||||||| |||||||||||| |||| Sbjct: 1130 gatggggtaagccggcgatttgtccgggttgaagagcccgaagtgcctctc 1080
>gb|DQ147111.1| Zea mays subsp. parviglumis isolate p15 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1182 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1131 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1081
>gb|DQ147110.1| Zea mays subsp. parviglumis isolate p14 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1130 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1080
>gb|DQ147108.1| Zea mays subsp. parviglumis isolate p12 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1185 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1134 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1084
>gb|DQ147105.1| Zea mays subsp. parviglumis isolate p9 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1185 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1134 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1084
>gb|DQ147104.1| Zea mays subsp. parviglumis isolate p8 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1182 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1131 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1081
>gb|DQ147103.1| Zea mays subsp. parviglumis isolate p6 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1182 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1131 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1081
>gb|DQ147102.1| Zea mays subsp. parviglumis isolate p5 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1185 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1134 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1084
>gb|DQ147101.1| Zea mays subsp. parviglumis isolate p4 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1185 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1134 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1084
>gb|DQ147099.1| Zea mays subsp. parviglumis isolate p2 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1182 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1131 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1081
>gb|DQ147098.1| Zea mays subsp. parviglumis isolate p1 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1185 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1134 gatggggtacgccggcgatttgtccgggttgaagaggccgaagtgcctctc 1084
>gb|AC092778.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015G17, complete sequence Length = 158173 Score = 65.9 bits (33), Expect = 7e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 279 ccggcgacttgtccgggttgaacagcccgaagtgcttctcg 319 |||| ||||||||||||||||| |||||||||||||||||| Sbjct: 118988 ccggtgacttgtccgggttgaagagcccgaagtgcttctcg 118948
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 7e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 279 ccggcgacttgtccgggttgaacagcccgaagtgcttctcg 319 |||| ||||||||||||||||| |||||||||||||||||| Sbjct: 22229830 ccggtgacttgtccgggttgaagagcccgaagtgcttctcg 22229870
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 7e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 279 ccggcgacttgtccgggttgaacagcccgaagtgcttctcg 319 |||| ||||||||||||||||| |||||||||||||||||| Sbjct: 22222859 ccggtgacttgtccgggttgaagagcccgaagtgcttctcg 22222899
>gb|AY612193.1| Hordeum vulgare beta-1,3-glucanase 2a mRNA, complete cds Length = 1249 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 1048 gatggggtaggccggcgatttgtcggggttgaagagcccaaagtgcttctc 998
>gb|M95407.1|MZE13BGLCN Wuglu; Zea mays; 1292 base-pairs Length = 1265 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||| ||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1061 gatggggtacaccggcgatttgtccgggttgaagaggccgaagtgcctctc 1011
>gb|DQ147100.1| Zea mays subsp. parviglumis isolate p3 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1186 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||||||| |||||||| |||||||||||||| || ||||||||| |||| Sbjct: 1135 gatggggtaagccggcgatttgtccgggttgaagaggccgaagtgcctctc 1085
>gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-glucanase II mRNA, complete cds Length = 1215 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 tactggaaccggatggggtacgccggcgacttgtccgggttgaacagcccgaag 310 |||| |||| ||||| ||| ||||||||||||||||||||||| ||||||||| Sbjct: 1053 tactagaactggatgttgtatgccggcgacttgtccgggttgaagagcccgaag 1000
>gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-glucanase gene, complete cds Length = 2135 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 tactggaaccggatggggtacgccggcgacttgtccgggttgaacagcccgaag 310 |||| |||| ||||| ||| ||||||||||||||||||||||| ||||||||| Sbjct: 1991 tactagaactggatgttgtatgccggcgacttgtccgggttgaagagcccgaag 1938
>gb|AF030771.1|AF030771 Hordeum vulgare beta-1,3-glucanase 2 (BGL32) gene, complete cds Length = 1242 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 tactggaaccggatggggtacgccggcgacttgtccgggttgaacagcccgaag 310 |||| |||| ||||| ||| ||||||||||||||||||||||| ||||||||| Sbjct: 1188 tactagaactggatgttgtatgccggcgacttgtccgggttgaagagcccgaag 1135
>emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-glucanase Length = 1257 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 tactggaaccggatggggtacgccggcgacttgtccgggttgaacagcccgaag 310 |||| |||| ||||| ||| ||||||||||||||||||||||| ||||||||| Sbjct: 1056 tactagaactggatgttgtatgccggcgacttgtccgggttgaagagcccgaag 1003
>gb|M62907.1|BLYCBGL32 H.vulgare L. (1-3)-beta-glucanase mRNA, complete cds Length = 1234 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 tactggaaccggatggggtacgccggcgacttgtccgggttgaacagcccgaag 310 |||| |||| ||||| ||| ||||||||||||||||||||||| ||||||||| Sbjct: 1055 tactagaactggatgttgtatgccggcgacttgtccgggttgaagagcccgaag 1002
>ref|NM_189709.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 280 cggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 ||||||||||| ||||||||||||||||||||| |||||| Sbjct: 975 cggcgacttgttggggttgaacagcccgaagtgcctctcgg 935
>gb|DQ090946.1| Triticum aestivum beta-1,3-glucanase mRNA, complete cds Length = 1338 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 278 gccggcgacttgtccgggttgaacagcccgaag 310 ||||||||||||||||||||||| ||||||||| Sbjct: 1064 gccggcgacttgtccgggttgaagagcccgaag 1032
>gb|DQ078255.1| Triticum aestivum beta-1,3-glucanase mRNA, complete cds Length = 1337 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 278 gccggcgacttgtccgggttgaacagcccgaag 310 ||||||||||||||||||||||| ||||||||| Sbjct: 1063 gccggcgacttgtccgggttgaagagcccgaag 1031
>gb|M23548.1|BLYGEH Hordeum vulgare 1,3-beta glucan endohydrolase precursor, mRNA, complete cds Length = 1250 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 278 gccggcgacttgtccgggttgaacagcccgaag 310 ||||||||||||||||||||||| ||||||||| Sbjct: 1033 gccggcgacttgtccgggttgaagagcccgaag 1001
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 280 cggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 ||||||||||| ||||||||||||||||||||| |||||| Sbjct: 41343236 cggcgacttgttggggttgaacagcccgaagtgcctctcgg 41343196 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 269 atggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 |||| ||| |||||||||| ||||||||||| || |||||||||||||||| Sbjct: 41519232 atggtgtaggccggcgactgatccgggttgaagaggccgaagtgcttctcgg 41519181 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 272 gggtacgccggcgacttgtccgggttgaaca 302 |||||||||||||||||||| |||||||||| Sbjct: 41368634 gggtacgccggcgacttgtcggggttgaaca 41368604 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||| |||||||||||| || ||||||||| |||| Sbjct: 41340521 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgcctctc 41340471 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 29615391 gggttgaacagcccaaagtgcttctcg 29615365
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 280 cggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 ||||||||||| ||||||||||||||||||||| |||||| Sbjct: 34729 cggcgacttgttggggttgaacagcccgaagtgcctctcgg 34689 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 272 gggtacgccggcgacttgtccgggttgaaca 302 |||||||||||||||||||| |||||||||| Sbjct: 60127 gggtacgccggcgacttgtcggggttgaaca 60097 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||| |||||||||||| || ||||||||| |||| Sbjct: 32014 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgcctctc 31964
>gb|U72252.1|OSU72252 Oryza sativa beta-1,3-glucanase precursor (Gns6) gene, complete cds Length = 2169 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 280 cggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 ||||||||||| ||||||||||||||||||||| |||||| Sbjct: 2145 cggcgacttgttggggttgaacagcccgaagtgcctctcgg 2105
>dbj|AK105972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F03, full insert sequence Length = 1240 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 280 cggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 ||||||||||| ||||||||||||||||||||| |||||| Sbjct: 999 cggcgacttgttggggttgaacagcccgaagtgcctctcgg 959
>dbj|AK068247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H16, full insert sequence Length = 1245 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 280 cggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 ||||||||||| ||||||||||||||||||||| |||||| Sbjct: 1004 cggcgacttgttggggttgaacagcccgaagtgcctctcgg 964
>ref|NM_189746.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 732 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 269 atggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 |||| ||| |||||||||| ||||||||||| || |||||||||||||||| Sbjct: 722 atggtgtaggccggcgactgatccgggttgaagaggccgaagtgcttctcgg 671
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 269 atggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 |||| ||| |||||||||| ||||||||||| || |||||||||||||||| Sbjct: 75525 atggtgtaggccggcgactgatccgggttgaagaggccgaagtgcttctcgg 75474
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 269 atggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctcgg 320 |||| ||| |||||||||| ||||||||||| || |||||||||||||||| Sbjct: 87431 atggtgtaggccggcgactgatccgggttgaagaggccgaagtgcttctcgg 87380
>ref|NM_189718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 996 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 272 gggtacgccggcgacttgtccgggttgaaca 302 |||||||||||||||||||| |||||||||| Sbjct: 974 gggtacgccggcgacttgtcggggttgaaca 944
>ref|NM_189708.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 993 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||| |||||||||||| || ||||||||| |||| Sbjct: 984 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgcctctc 934
>dbj|AK104862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E09, full insert sequence Length = 1296 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||| |||||||||||| || ||||||||| |||| Sbjct: 1085 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgcctctc 1035
>dbj|AK070677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063O17, full insert sequence Length = 1295 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||| |||||||||||| || ||||||||| |||| Sbjct: 1084 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgcctctc 1034
>dbj|AK060802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F06, full insert sequence Length = 1103 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||| |||||||||||| || ||||||||| |||| Sbjct: 909 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgcctctc 859
>dbj|AB027428.1| Oryza sativa mRNA for beta 1,3-glucanase, complete cds, clone:E1149 Length = 1280 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 ||||| ||| |||||||||| |||||||||||| || ||||||||| |||| Sbjct: 1072 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgcctctc 1022
>gb|AF112965.1| Triticum aestivum beta-1,3-glucanase precursor (Glb3) mRNA, complete cds Length = 1269 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 278 gccggcgacttgtccgggttgaacagcccgaagt 311 ||||||||||||||||| ||||||||||| |||| Sbjct: 1051 gccggcgacttgtccggattgaacagcccaaagt 1018
>gb|U72251.1|OSU72251 Oryza sativa beta-1,3-glucanase precursor (Gns5) gene, complete cds Length = 1834 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 268 gatggggtacgccggcgacttgtccgggttgaacagcccgaagtgc 313 ||||| ||| |||||||||| |||||||||||| || ||||||||| Sbjct: 1825 gatggagtatgccggcgactggtccgggttgaagaggccgaagtgc 1780
>emb|X16274.1|HVB13GLU Barley mRNA for beta 1-3 glucanase (EC 3.2.1.39) Length = 225 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 281 ggcgacttgtccgggttgaacagcccgaag 310 |||||||||||||||||||| ||||||||| Sbjct: 212 ggcgacttgtccgggttgaagagcccgaag 183
>gb|M91814.1|BLYGLU2X Barley beta-1,3-glucanase (GLU2) gene, exons 1-2 Length = 2301 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 278 gccggcgacttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 1881 gccggcgacttgtcgggattgaacagcccaaagtggttctc 1841
>ref|NM_191724.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 983 gggttgaacagcccaaagtgcttctcg 957
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 85211 gggttgaacagcccaaagtgcttctcg 85185
>dbj|AK104472.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D12, full insert sequence Length = 1182 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 995 gggttgaacagcccaaagtgcttctcg 969
>dbj|AK060862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G03, full insert sequence Length = 1182 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 995 gggttgaacagcccaaagtgcttctcg 969
>dbj|AK060113.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D11, full insert sequence Length = 1176 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 996 gggttgaacagcccaaagtgcttctcg 970
>gb|AF030167.1|AF030167 Oryza sativa glucanase mRNA, complete cds Length = 1177 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 979 gggttgaacagcccaaagtgcttctcg 953
>dbj|AB027430.1| Oryza sativa mRNA for beta-1,3-glucanase, partial cds, clone:S3206 Length = 1159 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 979 gggttgaacagcccaaagtgcttctcg 953
>dbj|AB027429.1| Oryza sativa mRNA for beta-1,3-glucanase, complete cds, clone:S3727 Length = 1167 Score = 46.1 bits (23), Expect = 0.068 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gggttgaacagcccgaagtgcttctcg 319 |||||||||||||| |||||||||||| Sbjct: 987 gggttgaacagcccaaagtgcttctcg 961
>gb|DQ207707.1| Zea mays cultivar inbred line Mo17 IDP449 marker Length = 508 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ttgacgtacgtacgcatgca 246 |||||||||||||||||||| Sbjct: 164 ttgacgtacgtacgcatgca 145
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tgcaatggttgcactcttgc 67 |||||||||||||||||||| Sbjct: 33398 tgcaatggttgcactcttgc 33417
>ref|XM_798356.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.160.0520) partial mRNA Length = 4818 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tcctgcattatacgcagctt 208 |||||||||||||||||||| Sbjct: 4241 tcctgcattatacgcagctt 4222
>gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, complete sequence Length = 232927 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 gcattgatctggttacacacttca 110 ||||||||||||||||||| |||| Sbjct: 106861 gcattgatctggttacacatttca 106884
>dbj|AK153596.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630010I08 product:unclassifiable, full insert sequence Length = 1375 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atctttctctttattcatga 28 |||||||||||||||||||| Sbjct: 327 atctttctctttattcatga 308
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tgcaatggttgcactcttgc 67 |||||||||||||||||||| Sbjct: 22929385 tgcaatggttgcactcttgc 22929404
>gb|AC154848.2| Mus musculus BAC clone RP23-38J19 from 13, complete sequence Length = 140465 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atctttctctttattcatga 28 |||||||||||||||||||| Sbjct: 139940 atctttctctttattcatga 139921
>emb|CT025639.13| Mouse DNA sequence from clone RP23-233I11 on chromosome 13, complete sequence Length = 219226 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 atctttctctttattcatga 28 |||||||||||||||||||| Sbjct: 150464 atctttctctttattcatga 150483
>gb|DQ147106.1| Zea mays subsp. parviglumis isolate p9b truncated pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1120 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 287 ttgtccgggttgaacagcccgaagtgcttctc 318 |||||||||||||| || ||||||||| |||| Sbjct: 1115 ttgtccgggttgaagaggccgaagtgcctctc 1084
>emb|AL772308.4| Mouse DNA sequence from clone RP23-451I21 on chromosome 15, complete sequence Length = 148496 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aatatctttctctttattca 25 |||||||||||||||||||| Sbjct: 95328 aatatctttctctttattca 95309 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,059,163 Number of Sequences: 3902068 Number of extensions: 2059163 Number of successful extensions: 37266 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37107 Number of HSP's gapped (non-prelim): 158 length of query: 320 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 298 effective length of database: 17,147,199,772 effective search space: 5109865532056 effective search space used: 5109865532056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
