ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet99d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN655_HUMAN (Q8N720) Zinc finger protein 655 (Vav-interacting Kr... 30 1.7
2ZN287_HUMAN (Q9HBT7) Zinc finger protein 287 30 2.2
3ZN287_MOUSE (Q9EQB9) Zinc finger protein 287 (Zfp-287) (Zinc fin... 28 6.3
4ZFP62_MOUSE (Q8C827) Zinc finger protein 62 homolog (Zfp-62) (ZT3) 28 6.3
5PP11_HUMAN (P21128) Placental protein 11 precursor (EC 3.4.21.-)... 28 8.2

>ZN655_HUMAN (Q8N720) Zinc finger protein 655 (Vav-interacting Kruppel-like|
           protein)
          Length = 491

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 83  QCDVVGVKSHKWSALVPHRSQHSREKKMK 169
           +CDV G   H+ SAL  H+  H+REK  K
Sbjct: 213 KCDVCGKIFHQSSALTRHQRIHTREKPYK 241



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>ZN287_HUMAN (Q9HBT7) Zinc finger protein 287|
          Length = 754

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 83  QCDVVGVKSHKWSALVPHRSQHSREK 160
           +C+V G K  K+ +L+ H+S H++EK
Sbjct: 362 KCNVCGKKFRKYPSLLKHQSTHAKEK 387



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>ZN287_MOUSE (Q9EQB9) Zinc finger protein 287 (Zfp-287) (Zinc finger protein|
           SKAT-2)
          Length = 759

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 86  CDVVGVKSHKWSALVPHRSQHSREK 160
           C+V G +  K+ +L+ HR  H++EK
Sbjct: 368 CNVCGKQFRKYPSLLAHRENHAKEK 392



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>ZFP62_MOUSE (Q8C827) Zinc finger protein 62 homolog (Zfp-62) (ZT3)|
          Length = 914

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 83  QCDVVGVKSHKWSALVPHRSQHSREKKMK 169
           +CD  G     +S+L+ H+S HS EK  K
Sbjct: 188 KCDECGKAYMSYSSLINHKSTHSGEKNCK 216



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>PP11_HUMAN (P21128) Placental protein 11 precursor (EC 3.4.21.-) (PP11)|
          Length = 369

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 86  CDVVGVKSHKWSALVPHRSQHSREKKMKNLFHIDVQCEGR 205
           C +   + HK S  +P   + + E    NL+     C+GR
Sbjct: 13  CGLAWAEDHKESEPLPQLEEETEEALASNLYSAPTSCQGR 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,792,850
Number of Sequences: 219361
Number of extensions: 615114
Number of successful extensions: 1552
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1552
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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