>gb|AF477157.1| HIV-1 isolate SM25c from Australia envelope glycoprotein (env)
           gene, partial cds
          Length = 525

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 125 aacattacagaaaatatcaca 145
           |||||||||||||||||||||
Sbjct: 451 aacattacagaaaatatcaca 471

>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete
              sequence
          Length = 223059

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 278    catcatatcttgggctctgga 298
              |||||||||||||||||||||
Sbjct: 191170 catcatatcttgggctctgga 191150

>gb|BC032159.1| Mus musculus scavenger receptor class A, member 5 (putative), mRNA
            (cDNA clone MGC:38582 IMAGE:5354657), complete cds
          Length = 3779

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  gtgctacatcatatcttggg 291
            ||||||||||||||||||||
Sbjct: 2416 gtgctacatcatatcttggg 2435

>gb|BC023907.1| Mus musculus scavenger receptor class A, member 5 (putative), mRNA
            (cDNA clone MGC:38173 IMAGE:5321978), complete cds
          Length = 3724

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  gtgctacatcatatcttggg 291
            ||||||||||||||||||||
Sbjct: 2376 gtgctacatcatatcttggg 2395

>gb|BC016096.1| Mus musculus scavenger receptor class A, member 5 (putative), mRNA
            (cDNA clone MGC:27633 IMAGE:4506472), complete cds
          Length = 3785

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  gtgctacatcatatcttggg 291
            ||||||||||||||||||||
Sbjct: 2436 gtgctacatcatatcttggg 2455

>gb|BC026758.1| Mus musculus scavenger receptor class A, member 5 (putative), mRNA
            (cDNA clone IMAGE:4011932), partial cds
          Length = 2839

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  gtgctacatcatatcttggg 291
            ||||||||||||||||||||
Sbjct: 1484 gtgctacatcatatcttggg 1503

>gb|U41036.1| Caenorhabditis elegans cosmid T14E8, complete sequence
          Length = 37245

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 124   aaacattacagaaaatatcacaagatac 151
             |||||||||| |||||||||||| ||||
Sbjct: 26788 aaacattacaaaaaatatcacaatatac 26761

>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete
            sequence
          Length = 198193

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  gtgctacatcatatcttggg 291
            ||||||||||||||||||||
Sbjct: 3549 gtgctacatcatatcttggg 3530

>gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome 14, complete sequence
          Length = 195696

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    gtgctacatcatatcttggg 291
              ||||||||||||||||||||
Sbjct: 164079 gtgctacatcatatcttggg 164060

>emb|AL355587.14| Human DNA sequence from clone RP11-561H23 on chromosome 10 Contains the
             3' end of a novel gene (KIAA1136) (FLJ37801) and a CpG
             island, complete sequence
          Length = 130039

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   acagaaaatatcacaagata 150
             ||||||||||||||||||||
Sbjct: 65652 acagaaaatatcacaagata 65633

>emb|BX469911.9| Zebrafish DNA sequence from clone DKEY-13K9 in linkage group 5, complete
              sequence
          Length = 226730

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    agttattctcatggttcaaa 237
              ||||||||||||||||||||
Sbjct: 201970 agttattctcatggttcaaa 201951

>dbj|AK133176.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4931418E21 product:hypothetical protein,
            full insert sequence
          Length = 3795

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  gtgctacatcatatcttggg 291
            ||||||||||||||||||||
Sbjct: 2461 gtgctacatcatatcttggg 2480

>dbj|AK084591.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330018F04 product:unclassifiable, full
           insert sequence
          Length = 2284

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 gtgctacatcatatcttggg 291
           ||||||||||||||||||||
Sbjct: 287 gtgctacatcatatcttggg 306

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 210      tccactcaagttattctcat 229
                ||||||||||||||||||||
Sbjct: 22557141 tccactcaagttattctcat 22557122

>dbj|AP007273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0035K09
          Length = 124866

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tccactcaagttattctcat 229
             ||||||||||||||||||||
Sbjct: 41093 tccactcaagttattctcat 41074

>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1047H05
          Length = 187273

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tccactcaagttattctcat 229
             ||||||||||||||||||||
Sbjct: 22550 tccactcaagttattctcat 22531

>ref|NM_028903.1| Mus musculus scavenger receptor class A, member 5 (putative)
            (Scara5), mRNA
          Length = 3785

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  gtgctacatcatatcttggg 291
            ||||||||||||||||||||
Sbjct: 2436 gtgctacatcatatcttggg 2455

>emb|BX004817.8| Zebrafish DNA sequence from clone DKEY-169B7, complete sequence
          Length = 174174

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    catatcttgggctctggatg 300
              ||||||||||||||||||||
Sbjct: 120150 catatcttgggctctggatg 120131


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,851,216
Number of Sequences: 3902068
Number of extensions: 2851216
Number of successful extensions: 53422
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53386
Number of HSP's gapped (non-prelim): 36
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)