>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 256     gctacgcgacgcacgccgtggcgatggcg 284
               |||||||||||||||||||||||| ||||
Sbjct: 8717160 gctacgcgacgcacgccgtggcgacggcg 8717132



 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 143     gcagtttcgacgagttgttttgt 165
               |||||||||||||||||||||||
Sbjct: 8717240 gcagtttcgacgagttgttttgt 8717218

>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0037N01
          Length = 174085

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 256    gctacgcgacgcacgccgtggcgatggcg 284
              |||||||||||||||||||||||| ||||
Sbjct: 132142 gctacgcgacgcacgccgtggcgacggcg 132114



 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 143    gcagtttcgacgagttgttttgt 165
              |||||||||||||||||||||||
Sbjct: 132222 gcagtttcgacgagttgttttgt 132200

>gb|AC114559.8| Mus musculus, clone RP23-50G21, complete sequence
          Length = 173404

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 157    ttgttttgtgtgcgtgtgcgcgc 179
              |||||||||||||||||||||||
Sbjct: 107758 ttgttttgtgtgcgtgtgcgcgc 107780

>gb|AE014173.1| Mus musculus piebald deletion region section 1 of 11 of the complete
              sequence
          Length = 400029

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 157    ttgttttgtgtgcgtgtgcgcgc 179
              |||||||||||||||||||||||
Sbjct: 257799 ttgttttgtgtgcgtgtgcgcgc 257777

>gb|AC080021.3| Genomic sequence for Mus musculus, clone RP23-422L7, complete sequence
          Length = 200065

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 157    ttgttttgtgtgcgtgtgcgcgc 179
              |||||||||||||||||||||||
Sbjct: 167114 ttgttttgtgtgcgtgtgcgcgc 167092

>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 163    tgtgtgcgtgtgcgcgcacgcg 184
              ||||||||||||||||||||||
Sbjct: 126634 tgtgtgcgtgtgcgcgcacgcg 126655

>gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, complete sequence
          Length = 151344

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 163  tgtgtgcgtgtgcgcgcacgc 183
            |||||||||||||||||||||
Sbjct: 1623 tgtgtgcgtgtgcgcgcacgc 1603

>gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, complete sequence
          Length = 207781

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 163    tgtgtgcgtgtgcgcgcacgc 183
              |||||||||||||||||||||
Sbjct: 103168 tgtgtgcgtgtgcgcgcacgc 103188

>gb|AC010851.2| Leishmania major chromosome 22 clone L4134, complete sequence
          Length = 33339

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 157   ttgttttgtgtgcgtgtgcgc 177
             |||||||||||||||||||||
Sbjct: 23996 ttgttttgtgtgcgtgtgcgc 23976

>gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosome 17, complete sequence
          Length = 191523

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    tgtgtgcgtgtgcgcgcacgc 183
              |||||||||||||||||||||
Sbjct: 152302 tgtgtgcgtgtgcgcgcacgc 152282

>gb|AC154676.2| Mus musculus BAC clone RP23-146O19 from 17, complete sequence
          Length = 180352

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   tgtgtgcgtgtgcgcgcacgc 183
             |||||||||||||||||||||
Sbjct: 83950 tgtgtgcgtgtgcgcgcacgc 83930

>emb|BX511212.10| Zebrafish DNA sequence from clone CH211-127A14 in linkage group 19,
             complete sequence
          Length = 178832

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 47    agcgcgagctagctgatcagagcga 71
             ||||||||||||||||| |||||||
Sbjct: 29538 agcgcgagctagctgatgagagcga 29514

>gb|AC134334.3| Mus musculus BAC clone RP24-143M4 from 9, complete sequence
          Length = 158518

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    gtgtgcgtgtgcgcgcacgcg 184
              |||||||||||||||||||||
Sbjct: 137712 gtgtgcgtgtgcgcgcacgcg 137732

>gb|AC140315.3| Mus musculus BAC clone RP23-396I19 from chromosome 3, complete sequence
          Length = 205029

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   tgtgtgcgtgtgcgcgcacg 182
             ||||||||||||||||||||
Sbjct: 15478 tgtgtgcgtgtgcgcgcacg 15497

>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
             sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   agttgttttgtgtgcgtgtg 174
             ||||||||||||||||||||
Sbjct: 49534 agttgttttgtgtgcgtgtg 49515

>gb|AC122009.2| Mus musculus BAC clone RP24-347B22 from 3, complete sequence
          Length = 152054

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   tgtgtgcgtgtgcgcgcacg 182
             ||||||||||||||||||||
Sbjct: 26258 tgtgtgcgtgtgcgcgcacg 26239

>gb|AC073341.10| Homo sapiens BAC clone RP11-549I23 from 7, complete sequence
          Length = 185574

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    aaaaaactcgatattattcatttc 33
             ||||||||| ||||||||||||||
Sbjct: 41530 aaaaaactccatattattcatttc 41553

>gb|AF477574.1| Bucculatrix ulmella 28S ribosomal RNA gene, partial sequence
          Length = 723

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 gctacgcgacgcacgccgtg 275
           ||||||||||||||||||||
Sbjct: 226 gctacgcgacgcacgccgtg 207

>gb|AF526427.1| Acanthamoeba hatchetti strain 11DS internal transcribed spacer 1,
           complete sequence
          Length = 320

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 tttgtgtgcgtgtgcgcgca 180
           ||||||||||||||||||||
Sbjct: 140 tttgtgtgcgtgtgcgcgca 159

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 273     gtggcgatggcgacgggcacgccg 296
               |||||||||||||| |||||||||
Sbjct: 3406102 gtggcgatggcgaccggcacgccg 3406125

>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     tagcgcgagctagctgatca 65
              ||||||||||||||||||||
Sbjct: 360350 tagcgcgagctagctgatca 360331

>emb|AL596125.27| Mouse DNA sequence from clone RP23-5O23 on chromosome 11 Contains the
              Chd3 gene for chromodomain helicase DNA binding protein 3,
              five novel genes, the 3' end of the gene for a novel
              protein similar to dynein and four CpG islands, complete
              sequence
          Length = 165212

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    agttgttttgtgtgcgtgtg 174
              ||||||||||||||||||||
Sbjct: 118998 agttgttttgtgtgcgtgtg 118979

>emb|AL672121.10| Mouse DNA sequence from clone RP23-256H2 on chromosome 11, complete
             sequence
          Length = 36089

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaactcaaaaaactcgata 22
             ||||||||||||||||||||
Sbjct: 22480 aaaactcaaaaaactcgata 22499

>gb|BC057523.1| Danio rerio ariadne ubiquitin-conjugating enzyme E2 binding protein
            homolog 1 (Drosophila), mRNA (cDNA clone MGC:66364
            IMAGE:5605378), complete cds
          Length = 2383

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 157  ttgttttgtgtgcgtgtgcgcgcacgcg 184
            |||||||||||| |||||||||| ||||
Sbjct: 2033 ttgttttgtgtgtgtgtgcgcgcgcgcg 2060

>ref|NM_199758.1| Danio rerio ariadne ubiquitin-conjugating enzyme E2 binding protein
            homolog 1 (Drosophila) (arih1), mRNA
          Length = 2383

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 157  ttgttttgtgtgcgtgtgcgcgcacgcg 184
            |||||||||||| |||||||||| ||||
Sbjct: 2033 ttgttttgtgtgtgtgtgcgcgcgcgcg 2060

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 270      gccgtggcgatggcgacggg 289
                ||||||||||||||||||||
Sbjct: 11514066 gccgtggcgatggcgacggg 11514085

>gb|AF270205.1|AF270205 Staphylococcus epidermidis strain SR1 clone step.1054b01 genomic
           sequence
          Length = 3974

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 133 taaattacgagcagtttcga 152
           ||||||||||||||||||||
Sbjct: 516 taaattacgagcagtttcga 497

>gb|AF269773.1|AF269773 Staphylococcus epidermidis strain SR1 clone step.1023c03 genomic
            sequence
          Length = 3001

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  taaattacgagcagtttcga 152
            ||||||||||||||||||||
Sbjct: 2400 taaattacgagcagtttcga 2419

>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0013F08
          Length = 166989

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   gccgtggcgatggcgacggg 289
             ||||||||||||||||||||
Sbjct: 30073 gccgtggcgatggcgacggg 30092

>emb|BX072568.5| Zebrafish DNA sequence from clone DKEY-238I7 in linkage group 6,
             complete sequence
          Length = 148322

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   ttttgtgtgcgtgtgcgcgcacgc 183
             ||||||||| ||||||||||||||
Sbjct: 65107 ttttgtgtgtgtgtgcgcgcacgc 65084

>emb|CR388156.7| Zebrafish DNA sequence from clone DKEY-15B23 in linkage group 7, complete
              sequence
          Length = 215806

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 163    tgtgtgcgtgtgcgcgcacgcg-gcatttcat 193
              |||||||||||| ||||||||| |||||||||
Sbjct: 212672 tgtgtgcgtgtgtgcgcacgcgtgcatttcat 212641

>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   tgtgtgcgtgtgcgcgcacg 182
             ||||||||||||||||||||
Sbjct: 89055 tgtgtgcgtgtgcgcgcacg 89074

>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210862

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    ttgttttgtgtgcgtgtgcg 176
              ||||||||||||||||||||
Sbjct: 158875 ttgttttgtgtgcgtgtgcg 158856

>emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chromosome 11, complete
             sequence
          Length = 202441

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   tgtgcgtgtgcgcgcacgcg 184
             ||||||||||||||||||||
Sbjct: 21101 tgtgcgtgtgcgcgcacgcg 21082

>emb|AL670227.7| Mouse DNA sequence from clone RP23-317N1 on chromosome 4, complete
              sequence
          Length = 219973

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    tgtgtgcgtgtgcgcgcacg 182
              ||||||||||||||||||||
Sbjct: 172307 tgtgtgcgtgtgcgcgcacg 172288

>emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chromosome 2, complete
              sequence
          Length = 251814

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 161    tttgtgtgcgtgtgcgcgcacgcg 184
              |||||||| |||||||||||||||
Sbjct: 112863 tttgtgtgtgtgtgcgcgcacgcg 112840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,532,746
Number of Sequences: 3902068
Number of extensions: 2532746
Number of successful extensions: 64533
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 64373
Number of HSP's gapped (non-prelim): 161
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)