Clone Name | rbaet99c02 |
---|---|
Clone Library Name | barley_pub |
>LBD40_ARATH (Q9ZW96) LOB domain protein 40| Length = 233 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -3 Query: 198 LRTSCNGCAWERGWVLQKCCSWPCIH*EKRGESE 97 +R SCNGC R + C PC+ K ES+ Sbjct: 1 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQ 34
>FZD1_HUMAN (Q9UP38) Frizzled 1 precursor (Frizzled-1) (Fz-1) (hFz1) (FzE1)| Length = 647 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Frame = -3 Query: 171 WERGWVLQKCCSW--PCIH*EKRG 106 WER WV Q C S+ PC H + G Sbjct: 565 WERSWVAQSCKSYAIPCPHLQAGG 588
>CUL7_HUMAN (Q14999) Cullin-7 (CUL-7)| Length = 1698 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = +3 Query: 60 DLTYSLDKRFNSIRFLPASPNVYKAMNNIFVKPILAPRHNRCRMFGV 200 D T SL NS+ +P++ V N PI+ R RC+ G+ Sbjct: 911 DSTSSLHTELNSVNVMPSASRVILLENLTRFWPIIQIRIKRCQQGGI 957
>CUL7_PONPY (Q5RCJ3) Cullin-7 (CUL-7)| Length = 1729 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = +3 Query: 60 DLTYSLDKRFNSIRFLPASPNVYKAMNNIFVKPILAPRHNRCRMFGV 200 D T SL NS+ +P++ V N PI+ R RC+ G+ Sbjct: 942 DSTSSLHTELNSVNVMPSASRVILLENLTRFWPIIQIRIKRCQQGGI 988
>MUDD_CHLPN (Q9Z701) MurC/ddl bifunctional enzyme [Includes:| UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase); D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine synthetase) (D-Ala-D-Ala ligase)] Length = 809 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/40 (30%), Positives = 25/40 (62%) Frame = -2 Query: 148 KMLFMALYTLGEAGRKRMLLNLLSSEYVKSFFVHLLAVTH 29 +++ +Y+ GE+ R+ ++L+ L+ + KS +VH V H Sbjct: 373 EVILTDVYSAGESPRESIILSDLAEQIRKSSYVHCCYVPH 412
>LBD42_ARATH (Q9CA30) LOB domain protein 42| Length = 233 Score = 27.7 bits (60), Expect = 8.5 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -3 Query: 198 LRTSCNGCAWERGWVLQKCCSWPCIH*EKRGESE 97 +R SCNGC R Q C PC+ K +S+ Sbjct: 1 MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQ 34
>FZD1_RAT (Q08463) Frizzled 1 precursor (Frizzled-1) (Fz-1) (rFz1)| Length = 641 Score = 27.7 bits (60), Expect = 8.5 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 2/19 (10%) Frame = -3 Query: 171 WERGWVLQKCCSW--PCIH 121 WER WV Q C S+ PC H Sbjct: 559 WERSWVAQSCKSYAIPCPH 577
>FZD1_MOUSE (O70421) Frizzled 1 precursor (Frizzled-1) (Fz-1) (mFz1)| Length = 642 Score = 27.7 bits (60), Expect = 8.5 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 2/19 (10%) Frame = -3 Query: 171 WERGWVLQKCCSW--PCIH 121 WER WV Q C S+ PC H Sbjct: 560 WERSWVAQSCKSYAIPCPH 578 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,906,616 Number of Sequences: 219361 Number of extensions: 534931 Number of successful extensions: 1310 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1303 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1310 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)