>ref|NM_185465.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1058

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgggcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 914 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 856

>gb|AY225189.1| Oryza sativa (indica cultivar-group) zinc finger protein mRNA,
           complete cds
          Length = 855

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgggcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 817 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 759

>gb|AY207044.1| Oryza sativa (indica cultivar-group) zinc-finger protein mRNA,
           complete cds
          Length = 855

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgggcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 817 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 759

>dbj|AK104425.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F10, full
           insert sequence
          Length = 1068

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgggcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 910 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 852

>dbj|AK068302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013144A04, full
           insert sequence
          Length = 1058

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgggcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 914 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 856

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                       
Query: 139     taggagggtccaaacacttcatatttgcaaactgggcagg 178
               ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1384825 taggaaggtccaaacacttcatatttgcaaactgggcagg 1384786

>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0425F02
          Length = 176979

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                     
Query: 139   taggagggtccaaacacttcatatttgcaaactgggcagg 178
             ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 93364 taggaaggtccaaacacttcatatttgcaaactgggcagg 93325

>gb|AY112568.1| Zea mays CL32837_1 mRNA sequence
          Length = 709

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 145 ggtccaaacacttcatatttgcaaactgggcaggtcttgtcgatcttgagccacttggtg 204
           ||||| |||| |||||||||||| || ||||| | ||||| || | ||||||| ||||||
Sbjct: 259 ggtccgaacagttcatatttgcatacagggcatggcttgttgaccctgagccatttggtg 318

                  
Query: 205 atgcaag 211
           | |||||
Sbjct: 319 acgcaag 325

>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence
          Length = 221860

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   tgcaaactgggcaggtcttgt 184
             |||||||||||||||||||||
Sbjct: 85874 tgcaaactgggcaggtcttgt 85894

>gb|AC183832.3| Pan troglodytes BAC clone CH251-260G12 from chromosome 7, complete
             sequence
          Length = 179012

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    atcttttctctcttttgtact 59
             |||||||||||||||||||||
Sbjct: 60564 atcttttctctcttttgtact 60544

>emb|BX649599.7| Zebrafish DNA sequence from clone CH211-224B1 in linkage group 18,
              complete sequence
          Length = 162087

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    cacttcatatttgcaaactgg 173
              |||||||||||||||||||||
Sbjct: 157574 cacttcatatttgcaaactgg 157554

>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence
          Length = 231380

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 164    tgcaaactgggcaggtcttgt 184
              |||||||||||||||||||||
Sbjct: 228208 tgcaaactgggcaggtcttgt 228188

>gb|AC083915.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-175P18, complete
             sequence
          Length = 182107

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     gaaatccaactaagtatctg 28
             ||||||||||||||||||||
Sbjct: 96919 gaaatccaactaagtatctg 96938

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 188     tcttgagccacttggtgatg 207
               ||||||||||||||||||||
Sbjct: 5160231 tcttgagccacttggtgatg 5160212

>gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, complete sequence
          Length = 173681

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   gcagggcaaggttatgatgt 250
             ||||||||||||||||||||
Sbjct: 36249 gcagggcaaggttatgatgt 36230

>emb|AL034345.3|HS207H1 Human DNA sequence from clone RP1-207H1 on chromosome 6p21.1-21.31
             Contains part of the DNAH8 gene for dynein axonemal heavy
             polypeptide 8, the 3' part of a novel gene and a 40S
             ribosomal protein S2 (RPS2) pseudogene, complete sequence
          Length = 84756

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tcttttctctcttttgtact 59
             ||||||||||||||||||||
Sbjct: 64602 tcttttctctcttttgtact 64621

>gb|AC108103.2| Homo sapiens chromosome 5 clone RP11-197O8, complete sequence
          Length = 151884

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    ttgagccacttggtgatgca 209
              ||||||||||||||||||||
Sbjct: 150841 ttgagccacttggtgatgca 150822

>gb|AC024565.6| Homo sapiens chromosome 5 clone CTD-2104P22, complete sequence
          Length = 108039

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 190  ttgagccacttggtgatgca 209
            ||||||||||||||||||||
Sbjct: 6392 ttgagccacttggtgatgca 6373


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,061,775
Number of Sequences: 3902068
Number of extensions: 2061775
Number of successful extensions: 43539
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43500
Number of HSP's gapped (non-prelim): 39
length of query: 253
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 231
effective length of database: 17,147,199,772
effective search space: 3961003147332
effective search space used: 3961003147332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)