ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet99b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L... 559 e-156
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 188 7e-45
3dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 7e-45
4dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 7e-45
5dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 7e-45
6dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 7e-45
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 188 7e-45
8emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112... 188 7e-45
9emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 188 7e-45
10dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
11gb|AY103985.1| Zea mays PCO103239 mRNA sequence 147 2e-32
12emb|X57903.1|OS08RG10F O.sativa random single-copy DNA fragment ... 78 2e-11
13dbj|D50456.1|CUSPSAL Cucumis sativus mRNA for PsaL, complete cds 56 7e-05
14dbj|D83007.1|CUSPSALG Cucumis sativus seedling cotyledon psaL mR... 56 7e-05
15dbj|AB219568.1| Fragaria x ananassa FrPSI mRNA for photosystem I... 52 0.001
16emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photo... 50 0.004
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.25
18emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4,... 44 0.25
19emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4,... 44 0.25
20gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 42 0.99
21gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete se... 42 0.99
22gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 3.9
23gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 3.9
24gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 3.9
25gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosom... 40 3.9
26gb|AC124513.3| Mus musculus BAC clone RP23-448C3 from chromosome... 40 3.9
27gb|AC117192.3| Mus musculus BAC clone RP23-77A18 from 2, complet... 40 3.9
28gb|CP000001.1| Bacillus cereus E33L, complete genome 40 3.9
29emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chro... 40 3.9
30gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 3.9
31emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13... 40 3.9
32gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 3.9
33gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 3.9
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
35dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
36gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 3.9
37gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 3.9
38gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3... 40 3.9
39emb|AL928659.16| Mouse DNA sequence from clone RP23-271B13 on ch... 40 3.9 
>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds
          Length = 777

 Score =  559 bits (282), Expect = e-156
 Identities = 282/282 (100%)
 Strand = Plus / Minus

                                                                       
Query: 17  ttatgaggaatatgtaaaaattcatttatacatagaagactcgttcaggcaaccaccgag 76
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttatgaggaatatgtaaaaattcatttatacatagaagactcgttcaggcaaccaccgag 713

                                                                       
Query: 77  aagagatggcatgatctggagacatcgtacatgcatgccacctattaatctacttgaaga 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aagagatggcatgatctggagacatcgtacatgcatgccacctattaatctacttgaaga 653

                                                                       
Query: 137 agtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatacaccgc 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatacaccgc 593

                                                                       
Query: 197 cgaagaagaagcctccggtgaactgcgaccacccttcggcggtctggagcttgtcggcct 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cgaagaagaagcctccggtgaactgcgaccacccttcggcggtctggagcttgtcggcct 533

                                                     
Query: 257 ccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 491
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                            
Query: 124      atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
                ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 13161383 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13161324

                                                                            
Query: 184      ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
                ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 13161323 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13161264

                                                                       
Query: 244      agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
                ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 13161263 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 13161209
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>dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D08, full
           insert sequence
          Length = 923

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 124 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690

                                                                       
Query: 184 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630

                                                                  
Query: 244 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
           ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 629 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 575
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>dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F01, full
           insert sequence
          Length = 932

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 124 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 699 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 640

                                                                       
Query: 184 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 639 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 580

                                                                  
Query: 244 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
           ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 579 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 525
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>dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B01, full
           insert sequence
          Length = 985

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 124 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 721 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 662

                                                                       
Query: 184 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 661 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 602

                                                                  
Query: 244 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
           ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 601 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 547
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>dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A09, full
           insert sequence
          Length = 923

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 124 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690

                                                                       
Query: 184 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630

                                                                  
Query: 244 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
           ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 629 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 575
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                            
Query: 124      atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
                ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 13115658 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13115599

                                                                            
Query: 184      ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
                ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 13115598 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13115539

                                                                       
Query: 244      agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
                ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 13115538 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 13115484
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>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 193499

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Plus

                                                                          
Query: 124    atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
              ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 169359 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 169418

                                                                          
Query: 184    ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
              ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 169419 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 169478

                                                                     
Query: 244    agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
              ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 169479 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 169533
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>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 178827

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                          
Query: 124    atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
              ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 150586 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 150527

                                                                          
Query: 184    ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
              ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 150526 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 150467

                                                                     
Query: 244    agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
              ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 150466 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 150412
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>dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-F07, full
           insert sequence
          Length = 964

 Score =  180 bits (91), Expect = 2e-42
 Identities = 154/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 124 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 183
           ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| | ||
Sbjct: 704 atctacttgaagaagtacgggagatcgagcacgtagaggaggaagtaggcccagaggacg 645

                                                                       
Query: 184 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 243
           ||||| |  ||||||||||||||||| ||||||||||  | ||| || ||||||||||| 
Sbjct: 644 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 585

                                                                  
Query: 244 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacg 298
           ||||||||||||||||||||||| |||||||| || |||  |||||| |||||||
Sbjct: 584 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacg 530
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>gb|AY103985.1| Zea mays PCO103239 mRNA sequence
          Length = 1657

 Score =  147 bits (74), Expect = 2e-32
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 125  tctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgc 184
            |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||   |||
Sbjct: 1499 tctacttgaagaagtaggggaggtcgagcacgtagaggagaaagtaggcccagagcacgc 1440

                                                                        
Query: 185  cggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgga 244
            |||| |  |||||||||||||| || ||||||||||  | ||| || ||||||||||| |
Sbjct: 1439 cggagatgccgccgaagaagaaccccccggtgaacttggcccagccgtcggcggtctgca 1380

                                                  
Query: 245  gcttgtcggcctccttcttgcgtccggtgagggtgagc 282
            ||||||||||||||||||| |  |||||||| ||||||
Sbjct: 1379 gcttgtcggcctccttcttcctgccggtgagcgtgagc 1342
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>emb|X57903.1|OS08RG10F O.sativa random single-copy DNA fragment 08RG108F
          Length = 162

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 125 tctacttgaagaagtatgggaggtcgagc-acgtagaggaggaagtatgcccaga 178
           |||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct: 109 tctacttgaagaagtacgggaggtcgagctacgtagaggaggaagtaggcccaga 55
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>dbj|D50456.1|CUSPSAL Cucumis sativus mRNA for PsaL, complete cds
          Length = 812

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 123 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 178
           ||||||||||| | |||| |||||||| |  || ||||||||||||||||||||||
Sbjct: 737 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 682
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>dbj|D83007.1|CUSPSALG Cucumis sativus seedling cotyledon psaL mRNA for subunit of
           photosystem I, complete cds
          Length = 811

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 123 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 178
           ||||||||||| | |||| |||||||| |  || ||||||||||||||||||||||
Sbjct: 674 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 619
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>dbj|AB219568.1| Fragaria x ananassa FrPSI mRNA for photosystem I protein, partial
           cds
          Length = 404

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 231 ttcggcggtctggagcttgtcggcctccttcttgcgtccggt 272
           ||||||||| ||||||| ||||| |||||||||||| |||||
Sbjct: 183 ttcggcggtttggagctggtcgggctccttcttgcggccggt 142
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>emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photosystem I reaction
           center
          Length = 834

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 184 ccggatacaccgccgaagaagaagcctccggtgaact 220
           ||||| ||||| ||||||||||| |||||||||||||
Sbjct: 676 ccggaaacaccaccgaagaagaaccctccggtgaact 640
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 34      aaattcatttatacatagaaga 55
               ||||||||||||||||||||||
Sbjct: 5987801 aaattcatttatacatagaaga 5987780
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>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13,
             complete sequence
          Length = 137572

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    aaattcatttatacatagaaga 55
             ||||||||||||||||||||||
Sbjct: 11198 aaattcatttatacatagaaga 11177
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>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17,
              complete sequence
          Length = 137981

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 34     aaattcatttatacatagaaga 55
              ||||||||||||||||||||||
Sbjct: 131038 aaattcatttatacatagaaga 131017
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    atatgtaaaaattcatttata 46
             |||||||||||||||||||||
Sbjct: 41414 atatgtaaaaattcatttata 41394
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>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence
          Length = 140426

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    atatgtaaaaattcatttata 46
             |||||||||||||||||||||
Sbjct: 41414 atatgtaaaaattcatttata 41394
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      attatgaggaatatgtaaaa 35
               ||||||||||||||||||||
Sbjct: 1463464 attatgaggaatatgtaaaa 1463483
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      attatgaggaatatgtaaaa 35
               ||||||||||||||||||||
Sbjct: 1439128 attatgaggaatatgtaaaa 1439147
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      attatgaggaatatgtaaaa 35
               ||||||||||||||||||||
Sbjct: 1439074 attatgaggaatatgtaaaa 1439093
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>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 31     taaaaattcatttatacatagaag 54
              ||||||||||||||| ||||||||
Sbjct: 218092 taaaaattcatttatccatagaag 218069
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>gb|AC124513.3| Mus musculus BAC clone RP23-448C3 from chromosome 19, complete sequence
          Length = 202236

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    taaaaattcatttatacatagaag 54
             ||||||||||||||| ||||||||
Sbjct: 11868 taaaaattcatttatccatagaag 11845
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>gb|AC117192.3| Mus musculus BAC clone RP23-77A18 from 2, complete sequence
          Length = 161199

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    aatctacttgaagaagtatg 142
              ||||||||||||||||||||
Sbjct: 143165 aatctacttgaagaagtatg 143184
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      attatgaggaatatgtaaaa 35
               ||||||||||||||||||||
Sbjct: 1474081 attatgaggaatatgtaaaa 1474100
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>emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chromosome 10 Contains part
             of the gene for alpha-catenin-like protein (MGC26194)
             (VR22), complete sequence
          Length = 163119

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tatgaggaatatgtaaaaat 37
             ||||||||||||||||||||
Sbjct: 64642 tatgaggaatatgtaaaaat 64661
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 231     ttcggcggtctggagcttgtcggc 254
               |||||||| |||||||||||||||
Sbjct: 1174925 ttcggcggactggagcttgtcggc 1174948
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>emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the
             3' end of the ACO2 gene for mitochondrial aconitase 2, the
             gene for a novel protein similar to yeast DNA-directed RNA
             Polymerase III 25 kD  Polypeptide, the gene for the human
             ortholog of rat Pippin, the PMM1 gene for
             phosphomannomutase 1 (PMMH-22, yeast SEC53 ortholog), and
             two novel genes. Contains ESTs, STSs, GSSs and  two
             putative CpG islands, complete sequence
          Length = 107818

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   agaggaggaagtatgcccag 177
             ||||||||||||||||||||
Sbjct: 64984 agaggaggaagtatgcccag 65003
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    attaatctacttgaagaagt 139
              ||||||||||||||||||||
Sbjct: 781146 attaatctacttgaagaagt 781165
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      ttatgaggaatatgtaaaaa 36
               ||||||||||||||||||||
Sbjct: 4009297 ttatgaggaatatgtaaaaa 4009316
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       atgaggaatatgtaaaaatt 38
                ||||||||||||||||||||
Sbjct: 24723095 atgaggaatatgtaaaaatt 24723114
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>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    atgaggaatatgtaaaaatt 38
             ||||||||||||||||||||
Sbjct: 91672 atgaggaatatgtaaaaatt 91691
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      ttatgaggaatatgtaaaaa 36
               ||||||||||||||||||||
Sbjct: 3949710 ttatgaggaatatgtaaaaa 3949729
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      attatgaggaatatgtaaaa 35
               ||||||||||||||||||||
Sbjct: 1439005 attatgaggaatatgtaaaa 1439024
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>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence
          Length = 189097

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcgtacatgcatgccaccta 120
             ||||||||||||||||||||
Sbjct: 81350 tcgtacatgcatgccaccta 81369
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>emb|AL928659.16| Mouse DNA sequence from clone RP23-271B13 on chromosome 2, complete
              sequence
          Length = 209560

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    aatctacttgaagaagtatg 142
              ||||||||||||||||||||
Sbjct: 121761 aatctacttgaagaagtatg 121780


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,509,825
Number of Sequences: 3902068
Number of extensions: 2509825
Number of successful extensions: 45841
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45561
Number of HSP's gapped (non-prelim): 279
length of query: 298
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 276
effective length of database: 17,147,199,772
effective search space: 4732627137072
effective search space used: 4732627137072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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