>gb|AF092524.1|AF092524 Triticum aestivum manganese superoxide dismutase (SOD) mRNA,
           nuclear gene encoding mitochondrial protein, complete
           cds
          Length = 896

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 132/158 (83%), Gaps = 12/158 (7%)
 Strand = Plus / Minus

                                                                       
Query: 103 cacctctatgcaatgtacgagtagaagggcccctacagtggagtactgcccgattttatt 162
           ||||||||||||||||||    |||||| |||  |||||||| || |||||  |||||||
Sbjct: 806 cacctctatgcaatgtac----agaaggtcccg-acagtggaatagtgcccacttttatt 752

                                                                       
Query: 163 attgcatatacaaaagatccaacagccggaaactcaagagcgag----gtactgtctgtc 218
           | |||||||||||| ||||||||||| |||||||||||||||||    ||||||||||||
Sbjct: 751 actgcatatacaaa-gatccaacagcgggaaactcaagagcgagccaagtactgtctgtc 693

                                                 
Query: 219 cattctcacaaatcaaatcacgcaagcactttctcata 256
             | ||||  |  ||||||||||||||||||| |||||
Sbjct: 692 --tactcatcagacaaatcacgcaagcactttttcata 657

>gb|U72212.1|TAU72212 Triticum aestivum manganese superoxide dismutase (SOD3.1) mRNA,
           nuclear gene encoding mitochondrial protein, complete
           cds
          Length = 934

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 137 acagtggagtactgcccgattttattattgcatatacaaaagatccaacagccggaaact 196
           |||||||| || |||||  |||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 814 acagtggaatagtgcccacttttattactgcatatacaaa-gatccaacagcgggaaact 756

                     
Query: 197 caagagcgag 206
           ||||||||||
Sbjct: 755 caagagcgag 746

>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds;
             and mitochondrial Mn-superoxide dismutase (MnSOD) gene,
             complete cds, nuclear gene encoding mitochondrial protein
          Length = 11304

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 72    caggcactgtactgtgcattagacattagtccacctctatgcaatgtac 120
             ||||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 11243 caggcactgtagtgcgcattagacagtagtccacctctatgcaatgtac 11195



 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 232   caaatcacgcaagcactttctcata 256
             ||||||||||||||||||| |||||
Sbjct: 11104 caaatcacgcaagcactttttcata 11080

>gb|U73172.1|TAU73172 Triticum aestivum manganese superoxide dismutase (SOD3.2) mRNA,
           nuclear gene encoding mitochondrial protein, complete
           cds
          Length = 891

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 72  caggcactgtactgtgcattagacattagtccacctctatgcaatgtac 120
           ||||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 849 caggcactgtagtgcgcattagacagtagtccacctctatgcaatgtac 801

>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03,
             complete sequence
          Length = 146278

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 95    cattagtccacctctatgcaatgtac 120
             |||||||||||||||| |||||||||
Sbjct: 68813 cattagtccacctctacgcaatgtac 68788

>emb|AL807378.5| Zebrafish DNA sequence from clone CH211-215A18 in linkage group 7
              Contains three CpG islands, complete sequence
          Length = 198700

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 211    tgtctgtccattctcacaaatc 232
              ||||||||||||||||||||||
Sbjct: 150131 tgtctgtccattctcacaaatc 150152

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 95       cattagtccacctctatgcaatgtac 120
                |||||||||||||||| |||||||||
Sbjct: 14917897 cattagtccacctctacgcaatgtac 14917872

>dbj|D29734.1|RICYK48 Oryza sativa mRNA, partial homologous to superoxide dismutase gene
          Length = 330

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 95  cattagtccacctctatgcaatgtac 120
           |||||||||||||||| |||||||||
Sbjct: 319 cattagtccacctctacgcaatgtac 294

>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence
          Length = 166110

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 9      gaatgactgtattaaacacgca 30
              ||||||||||||||||||||||
Sbjct: 155194 gaatgactgtattaaacacgca 155173

>dbj|AK119904.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A05, full
           insert sequence
          Length = 901

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 95  cattagtccacctctatgcaatgtac 120
           |||||||||||||||| |||||||||
Sbjct: 881 cattagtccacctctacgcaatgtac 856

>dbj|AK104160.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E09, full
           insert sequence
          Length = 901

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 95  cattagtccacctctatgcaatgtac 120
           |||||||||||||||| |||||||||
Sbjct: 881 cattagtccacctctacgcaatgtac 856

>dbj|AK104030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-C01, full
           insert sequence
          Length = 909

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 95  cattagtccacctctatgcaatgtac 120
           |||||||||||||||| |||||||||
Sbjct: 879 cattagtccacctctacgcaatgtac 854

>dbj|AK070528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060D13, full
           insert sequence
          Length = 928

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 95  cattagtccacctctatgcaatgtac 120
           |||||||||||||||| |||||||||
Sbjct: 882 cattagtccacctctacgcaatgtac 857

>emb|CR759742.10| Zebrafish DNA sequence from clone CH211-149K24 in linkage group 7,
             complete sequence
          Length = 130794

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 211   tgtctgtccattctcacaaatc 232
             ||||||||||||||||||||||
Sbjct: 54603 tgtctgtccattctcacaaatc 54582

>gb|L19436.1|RICSODAOA Rice mitochondrial manganese-superoxide dismutase (sodAOs1) mRNA,
           complete cds
          Length = 878

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 95  cattagtccacctctatgcaatgtac 120
           |||||||||||||||| |||||||||
Sbjct: 848 cattagtccacctctacgcaatgtac 823

>gb|L34039.1|RICRMSOA Oryza sativa manganese superoxide dismutase (rmsod2) mRNA, complete
            cds
          Length = 1352

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 95   cattagtccacctctatgcaatgtac 120
            |||||||||||||||| |||||||||
Sbjct: 1332 cattagtccacctctacgcaatgtac 1307

>gb|L34038.1|RICRMSO Oryza sativa manganese superoxide dismutase (rmsod1) mRNA, complete
           cds
          Length = 951

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 95  cattagtccacctctatgcaatgtac 120
           |||||||||||||||| |||||||||
Sbjct: 933 cattagtccacctctacgcaatgtac 908

>dbj|AB026725.1| Oryza sativa (japonica cultivar-group) sodA gene for
            manganese-superoxide dismutase, complete cds
          Length = 4937

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 95   cattagtccacctctatgcaatgtac 120
            |||||||||||||||| |||||||||
Sbjct: 4804 cattagtccacctctacgcaatgtac 4779

>gb|CP000197.1| Drosophila melanogaster genomic scaffold 211000022280739
          Length = 49535

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 46    aagtgctagtaccaaaatggacagg 70
             |||||||||| ||||||||||||||
Sbjct: 42509 aagtgctagtgccaaaatggacagg 42533

>gb|AC132274.3| Mus musculus BAC clone RP24-341I21 from chromosome 3, complete sequence
          Length = 172883

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   catatacaaaagatccaaca 186
             ||||||||||||||||||||
Sbjct: 91991 catatacaaaagatccaaca 92010

>gb|AC092940.6| Homo sapiens 3 BAC RP11-128L14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164805

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 231    tcaaatcacgcaagcactttctca 254
              |||||||||||||||| |||||||
Sbjct: 137197 tcaaatcacgcaagcagtttctca 137174

>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence
          Length = 210115

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    tccacctctatgcaatgtac 120
              ||||||||||||||||||||
Sbjct: 146064 tccacctctatgcaatgtac 146045

>gb|AC097721.3| Homo sapiens BAC clone RP11-36O6 from 2, complete sequence
          Length = 144493

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     ctgtgcattagacattagtc 102
              ||||||||||||||||||||
Sbjct: 119804 ctgtgcattagacattagtc 119823

>gb|AC005276.1|AC005276 Homo sapiens clone fragment UWGC:gap3 from 7q31.3, complete sequence
          Length = 16168

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 231   tcaaatcacgcaagcactttctca 254
             |||||||||||||||| |||||||
Sbjct: 13059 tcaaatcacgcaagcagtttctca 13082


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,153,555
Number of Sequences: 3902068
Number of extensions: 2153555
Number of successful extensions: 35962
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35912
Number of HSP's gapped (non-prelim): 48
length of query: 256
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 234
effective length of database: 17,147,199,772
effective search space: 4012444746648
effective search space used: 4012444746648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)