ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|Z47746.1|SC8557 S.cerevisiae chromosome IV cosmid 8557 42 0.27
2emb|X84817.1|SCDNABMH2 S.cerevisiae BMH2 gene 42 0.27
3gb|DQ333113.1| Synthetic construct Saccharomyces cerevisiae clon... 42 0.27
4gb|U01883.1|U01883 Saccharomyces cerevisiae 14-3-3-like protein ... 42 0.27

>emb|Z47746.1|SC8557 S.cerevisiae chromosome IV cosmid 8557
          Length = 36217

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    acaacaagctccagctgaaca 86
             |||||||||||||||||||||
Sbjct: 23143 acaacaagctccagctgaaca 23163



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>emb|X84817.1|SCDNABMH2 S.cerevisiae BMH2 gene
          Length = 1011

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 66  acaacaagctccagctgaaca 86
           |||||||||||||||||||||
Sbjct: 839 acaacaagctccagctgaaca 859



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>gb|DQ333113.1| Synthetic construct Saccharomyces cerevisiae clone FLH001624.01X
           BMH2 gene, complete sequence
          Length = 822

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 66  acaacaagctccagctgaaca 86
           |||||||||||||||||||||
Sbjct: 777 acaacaagctccagctgaaca 797



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>gb|U01883.1|U01883 Saccharomyces cerevisiae 14-3-3-like protein Bmh2p (BMH2) gene,
            complete cds
          Length = 1214

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 66   acaacaagctccagctgaaca 86
            |||||||||||||||||||||
Sbjct: 1059 acaacaagctccagctgaaca 1079


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 407,888
Number of Sequences: 3902068
Number of extensions: 407888
Number of successful extensions: 21808
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21804
Number of HSP's gapped (non-prelim): 4
length of query: 97
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 76
effective length of database: 17,151,101,840
effective search space: 1303483739840
effective search space used: 1303483739840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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