>CATA_BACST (P14412) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 735

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 170 WWPLSLSLTCMHRH*TRPNGHD 235
           WWP  L+L+ +H+H  + N HD
Sbjct: 31  WWPNQLNLSILHQHDRKTNPHD 52

>SMYD4_PONPY (Q5R5X9) SET and MYND domain-containing protein 4|
          Length = 804

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 310 YCHRCIKLLAGVLSCSGCS 366
           YCHRC+K     + C GCS
Sbjct: 295 YCHRCLKHTLATVPCDGCS 313

>SMYD4_HUMAN (Q8IYR2) SET and MYND domain-containing protein 4|
          Length = 804

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 310 YCHRCIKLLAGVLSCSGCS 366
           YCHRC+K     + C GCS
Sbjct: 295 YCHRCLKHTLATVPCDGCS 313

>SMYD4_CHICK (Q5F3V0) SET and MYND domain-containing protein 4|
          Length = 742

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 310 YCHRCIKLLAGVLSCSGCS 366
           YCH C+K L   + C GCS
Sbjct: 294 YCHHCLKQLLASIPCCGCS 312

>SECA_TREPA (O83394) Preprotein translocase secA subunit|
          Length = 916

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/60 (35%), Positives = 26/60 (43%)
 Frame = +1

Query: 199 HAQTLNEAEWARWRSSTANTKPVRLCG*LAPDGHEEQYCHRCIKLLAGVLSCSGCSGRSR 378
           H Q   EAE+ RWR   A+ + V+  G L   G E     R    L G     G  GRS+
Sbjct: 551 HMQACYEAEYTRWR---ADYEEVKQLGGLYVIGTERHESRRIDNQLRGRSGRQGDPGRSK 607

>SMYD4_MOUSE (Q8BTK5) SET and MYND domain-containing protein 4|
          Length = 799

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 310 YCHRCIKLLAGVLSCSGCS 366
           YCHRC+K     + C  CS
Sbjct: 295 YCHRCLKHTLATVPCGSCS 313

>MDC1_RAT (Q5U2M8) Mediator of DNA damage checkpoint protein 1|
          Length = 1279

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -2

Query: 392  GHQGARLLPEQPEQLSTPANNLMQRWQYCSSCPSGAS*PHKR 267
            G QG+R  P  P+  STPA    Q     SS  S A  PH++
Sbjct: 979  GKQGSRTAPVGPKSYSTPAEPEPQSSASQSSGASEADSPHQK 1020

>TELT_MOUSE (O70548) Telethonin (Titin cap protein)|
          Length = 167

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 205 QTLNEAEWARWRSSTANTKPVRLCG*LAPDGHEEQYCHR 321
           Q   EA WA W+  T +T+P   C     D    +  HR
Sbjct: 15  QERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHR 53

>CATA_RHOCA (P37743) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 576

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 170 WWPLSLSLTCMHRH*TRPNGHDG 238
           WWP +L+L  +H+H T+ N  +G
Sbjct: 28  WWPNALNLDILHQHDTKGNPLNG 50

>UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-recognin (EC|
            6.-.-.-) (Ubiquitin-protein ligase E3-alpha)
          Length = 1927

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 368  PEQPEQLSTPANNLMQRWQYCSSCPSGAS*PHKRTGFVLAVLLLHRA 228
            P +P+   TP + L+      S  P+ A  PH  T F   V L + A
Sbjct: 1560 PPRPKLAQTPGSPLLSAPSTSSFTPAPAQIPHSGTNFAFLVQLFNPA 1606

>VIF_CAEVC (P33462) Virion infectivity factor (Q protein) (SOR protein)|
          Length = 229

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = -2

Query: 320 RWQYCSSCPSGAS*PHKRTGFVLAVLLLHRAHSASFSVCACM*VREREAT 171
           RW  C SC  G    H RT  +  ++LL       F V      R    T
Sbjct: 150 RWDLCKSCAQGEVVKHTRTKSLERLVLLQMVEQHVFQVLPLWRARRSSTT 199

>ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)|
          Length = 638

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 322 NGGSTAPRVHPALASHTNGRASCWQYCSSIVPIRPR 215
           NGG+ AP    ++ SHT+ RAS  Q  SS     PR
Sbjct: 178 NGGTVAPATVGSVRSHTSSRASENQSPSSSNYFSPR 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,965,751
Number of Sequences: 219361
Number of extensions: 957061
Number of successful extensions: 2189
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)