Clone Name | rbaet98g10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor | 45 | 4e-05 | 2 | GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 pre... | 44 | 8e-05 | 3 | ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor | 44 | 1e-04 | 4 | GLP1_SINAL (P45854) Germin-like protein 1 precursor | 42 | 3e-04 | 5 | GL31_ARATH (P94040) Germin-like protein subfamily 3 member 1 pre... | 42 | 3e-04 | 6 | AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor | 38 | 0.005 | 7 | GLP1_BRANA (P46271) Germin-like protein 1 precursor | 37 | 0.016 |
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>AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor| Length = 209 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/32 (59%), Positives = 26/32 (81%) Frame = -2 Query: 331 PNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 P+PGLQI D+ALF N+LP+ ++ + TFLD AQ Sbjct: 166 PSPGLQILDFALFKNDLPTELIAQTTFLDAAQ 197
>GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 precursor| (AtGER3) (AtGLP2) Length = 211 Score = 44.3 bits (103), Expect = 8e-05 Identities = 20/31 (64%), Positives = 25/31 (80%) Frame = -2 Query: 328 NPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 +PGLQI +ALFAN+LPS +VE TFL DA+ Sbjct: 169 SPGLQILPFALFANDLPSELVEATTFLSDAE 199
>ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor| Length = 214 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/31 (61%), Positives = 25/31 (80%) Frame = -2 Query: 328 NPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 +PGLQI D+ALF N+LP+ V+ + TFLD AQ Sbjct: 172 SPGLQILDFALFKNDLPTEVIAQTTFLDAAQ 202
>GLP1_SINAL (P45854) Germin-like protein 1 precursor| Length = 211 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = -2 Query: 328 NPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 +PGLQI +ALFAN+LPS +VE TFL D + Sbjct: 169 SPGLQILPFALFANDLPSELVEATTFLSDEE 199
>GL31_ARATH (P94040) Germin-like protein subfamily 3 member 1 precursor| (AtGER1) (At-GERM1) (AtGLP1) Length = 208 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/28 (67%), Positives = 23/28 (82%) Frame = -2 Query: 328 NPGLQITDYALFANNLPSAVVEKVTFLD 245 NPGLQI D+ALFAN+LP+ +V TFLD Sbjct: 166 NPGLQILDFALFANSLPTELVVGTTFLD 193
>AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor| Length = 209 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = -2 Query: 331 PNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 P+PGLQI D+ALF N+L + ++ + T LD Q Sbjct: 166 PSPGLQIVDFALFKNDLATELIAQTTLLDAPQ 197
>GLP1_BRANA (P46271) Germin-like protein 1 precursor| Length = 207 Score = 36.6 bits (83), Expect = 0.016 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = -2 Query: 328 NPGLQITDYALFANNLPSAVVEKVTFLDDA 239 +PGLQI D+ALFAN L + +V TFL A Sbjct: 165 SPGLQILDFALFANTLSTELVSATTFLPPA 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,453,148 Number of Sequences: 219361 Number of extensions: 481760 Number of successful extensions: 949 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 942 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 949 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)