>gb|AF082693.1|AF082693 Fundulus heteroclitus clone FHGA7 lactate dehydrogenase B gene,
           promoter
          Length = 309

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 54  tcgatgatgatgatacaaataa 33

>gb|AF082692.1|AF082692 Fundulus heteroclitus clone FHGA6 lactate dehydrogenase B gene,
           promoter
          Length = 315

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 54  tcgatgatgatgatacaaataa 33

>gb|U59854.1|FHU59854 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1039

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 804 tcgatgatgatgatacaaataa 783

>gb|U59853.1|FHU59853 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 806 tcgatgatgatgatacaaataa 785

>gb|U59843.1|FHU59843 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1040

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 806 tcgatgatgatgatacaaataa 785

>gb|U59841.1|FHU59841 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1084

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 844 tcgatgatgatgatacaaataa 823

>gb|U59837.1|FHU59837 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1042

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 808 tcgatgatgatgatacaaataa 787

>gb|U59836.1|FHU59836 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1039

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 805 tcgatgatgatgatacaaataa 784

>gb|U59835.1|FHU59835 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1038

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 804 tcgatgatgatgatacaaataa 783

>gb|U59834.1|FHU59834 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1037

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 802 tcgatgatgatgatacaaataa 781

>gb|U59833.1|FHU59833 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1037

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 93  tcgatgatgatgatacaaataa 114
           ||||||||||||||||||||||
Sbjct: 802 tcgatgatgatgatacaaataa 781

>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
             complete sequence
          Length = 160142

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    tcgatgatgatgatacaaata 113
             |||||||||||||||||||||
Sbjct: 28388 tcgatgatgatgatacaaata 28408

>gb|U49830.2| Caenorhabditis elegans cosmid C33F10, complete sequence
          Length = 46463

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    cgatgatgatgatacaaataa 114
             |||||||||||||||||||||
Sbjct: 44151 cgatgatgatgatacaaataa 44171

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       tcgatgatgatgatacaaata 113
                |||||||||||||||||||||
Sbjct: 21435305 tcgatgatgatgatacaaata 21435325



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 178      ccgatggacagacggatggc 197
                ||||||||||||||||||||
Sbjct: 13146461 ccgatggacagacggatggc 13146442



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 178      ccgatggacagacggatggc 197
                ||||||||||||||||||||
Sbjct: 13143677 ccgatggacagacggatggc 13143658

>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete
             sequence
          Length = 251762

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    atgatgatgatacaaataaa 115
             ||||||||||||||||||||
Sbjct: 91207 atgatgatgatacaaataaa 91226

>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0082F22, complete sequence
          Length = 176038

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    ccgatggacagacggatggc 197
              ||||||||||||||||||||
Sbjct: 109238 ccgatggacagacggatggc 109219



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    ccgatggacagacggatggc 197
              ||||||||||||||||||||
Sbjct: 106454 ccgatggacagacggatggc 106435

>gb|AC122805.4| Mus musculus BAC clone RP23-296O23 from 3, complete sequence
          Length = 202733

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   gtacaagtacacatgcatat 172
             ||||||||||||||||||||
Sbjct: 22438 gtacaagtacacatgcatat 22419

>gb|AY177248.1| Oryctolagus cuniculus whey acidic protein (WAP) gene, upstream
           regulatory region
          Length = 2560

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  gagggcatctcgctcgctcg 95
           ||||||||||||||||||||
Sbjct: 755 gagggcatctcgctcgctcg 774

>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    gatgatgatgatacaaataa 114
             ||||||||||||||||||||
Sbjct: 26076 gatgatgatgatacaaataa 26057

>emb|CR937191.1| Single read from an extremity of a cDNA clone made from Aedes
           aegypti total adult females. 5-prime end of clone
           KW0AAB2YK24AAM1 from strain Liverpool of Aedes aegypti
           (yellow fever mosquito)
          Length = 908

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  tcgatgatgatgatacaaat 112
           ||||||||||||||||||||
Sbjct: 318 tcgatgatgatgatacaaat 337

>emb|CR354438.9| Zebrafish DNA sequence from clone CH211-243G16 in linkage group 8,
             complete sequence
          Length = 136324

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    atgatgatacaaataaacacacaa 122
             ||||||| ||||||||||||||||
Sbjct: 58180 atgatgaaacaaataaacacacaa 58203

>emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 in linkage group 20
              Contains the kit gene for kit receptor, the 3' end of the
              pdgfra gene for platelet derived growth factor receptor
              alpha and a CpG island, complete sequence
          Length = 134212

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    atgatacaaataaacacaca 121
              ||||||||||||||||||||
Sbjct: 114632 atgatacaaataaacacaca 114613

>gb|AC154642.2| Mus musculus BAC clone RP23-277C14 from chromosome 14, complete
             sequence
          Length = 211315

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    tacattgcgcacagctagggagag 78
             |||||||| |||||||||||||||
Sbjct: 81357 tacattgctcacagctagggagag 81380

>emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 in linkage group 5,
              complete sequence
          Length = 165851

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    gctgctaaacacatttaact 215
              ||||||||||||||||||||
Sbjct: 103691 gctgctaaacacatttaact 103672

>emb|BX322622.10| Zebrafish DNA sequence from clone DKEYP-14D3 in linkage group 8, complete
              sequence
          Length = 162365

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     atgatgatacaaataaacacacaa 122
              ||||||| ||||||||||||||||
Sbjct: 158836 atgatgaaacaaataaacacacaa 158859

>gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180555

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    gatgatgatgatacaaataa 114
             ||||||||||||||||||||
Sbjct: 61129 gatgatgatgatacaaataa 61110

>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      aatccttccatccattcgct 28
              ||||||||||||||||||||
Sbjct: 519053 aatccttccatccattcgct 519034

>emb|BX248242.5| Zebrafish DNA sequence from clone BUSM1-205D10 in linkage group 20,
             complete sequence
          Length = 104779

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   atgatacaaataaacacaca 121
             ||||||||||||||||||||
Sbjct: 10904 atgatacaaataaacacaca 10885

>emb|AL691516.5| Zebrafish DNA sequence from clone BUSM1-116L04 in linkage group 20,
             complete sequence
          Length = 80250

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   atgatacaaataaacacaca 121
             ||||||||||||||||||||
Sbjct: 63793 atgatacaaataaacacaca 63774

>gb|AC132143.3| Mus musculus BAC clone RP23-20J10 from 3, complete sequence
          Length = 205880

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    gtacaagtacacatgcatat 172
              ||||||||||||||||||||
Sbjct: 125910 gtacaagtacacatgcatat 125891


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,293,681
Number of Sequences: 3902068
Number of extensions: 2293681
Number of successful extensions: 180339
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 180094
Number of HSP's gapped (non-prelim): 245
length of query: 226
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 204
effective length of database: 17,147,199,772
effective search space: 3498028753488
effective search space used: 3498028753488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)