ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet98f11 |
|---|---|
| Clone Library Name | barley_pub |
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 86.3 bits (212), Expect = 2e-17 Identities = 42/45 (93%), Positives = 44/45 (97%) Frame = -3 Query: 390 YIXDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 Y+ DTEKLERLK+AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL Sbjct: 212 YVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 86.3 bits (212), Expect = 2e-17 Identities = 42/45 (93%), Positives = 44/45 (97%) Frame = -3 Query: 390 YIXDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 Y+ DTEKLERLKVAEIKH+RLAMLAMLIFYFEAGQGKTPLGALGL Sbjct: 212 YVPDTEKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 256
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 81.6 bits (200), Expect = 4e-16 Identities = 40/45 (88%), Positives = 43/45 (95%) Frame = -3 Query: 390 YIXDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 Y DT+KLERLK+AEIKH+RLAMLAMLIFYFEAGQGKTPLGALGL Sbjct: 217 YNPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 261
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 45.8 bits (107), Expect = 2e-05 Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEAG-QGKTPLGAL 262 D EKL+ LK+AEIKHSRLAM+A LIF +A GK P+ L Sbjct: 231 DPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFL 271
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 37.7 bits (86), Expect = 0.007 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFE-AGQGKTPL 271 D EK +L++AEIKH+RLAM+A L F + A GK PL Sbjct: 231 DPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPL 268
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 33.9 bits (76), Expect = 0.096 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPLGAL 262 D E+ RLK AEIKH+RLAM++ + +A G+ LG+L Sbjct: 226 DEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSL 266
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA---GQGKTPLGALGL*DDF 244 D E+ LKV EIK+ RLAM AML F+ +A G+G A L D F Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPF 262
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E L LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 193 DPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 230
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -3 Query: 387 IXDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 + D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 59 LTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 98
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 33.1 bits (74), Expect = 0.16 Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFE-AGQGKTPL 271 D K +L++AEIKH+RLAM+ L F + A GK PL Sbjct: 228 DPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPL 265
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.16 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPLGAL 262 D E LKV EIK+ RLAM +M F+ +A GK PL L Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNL 244
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 33.1 bits (74), Expect = 0.16 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E+ LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 201 DPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 238
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 33.1 bits (74), Expect = 0.16 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 201 DAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 32.7 bits (73), Expect = 0.21 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA 292 DTE LKV E+K+ RLAM +M F+ +A Sbjct: 205 DTEAFAELKVKELKNGRLAMFSMFGFFVQA 234
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPL 240
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 182 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 219
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D E+ ERL+ E+KH R+AMLA+ Sbjct: 29 DQERFERLRYVEVKHGRIAMLAI 51
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 198 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D E+ ERL+ E+KH R+AMLA+ Sbjct: 58 DQERFERLRYVEVKHGRIAMLAI 80
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D E+ ERL+ E+KH R+AMLA+ Sbjct: 64 DQERFERLRYVEVKHGRIAMLAI 86
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 53 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 90
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 32.7 bits (73), Expect = 0.21 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 274 D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 32.7 bits (73), Expect = 0.21 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 274 D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 32.3 bits (72), Expect = 0.28 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA 292 D + ++ LK+ EIK+ RLAMLA+L ++ +A Sbjct: 214 DEKSMKELKLKEIKNGRLAMLAILGYFIQA 243
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 32.3 bits (72), Expect = 0.28 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = -3 Query: 390 YIXDTEKLERLKVAEIKHSRLAMLAMLIF 304 Y D K E LKV EIK+ RLA+LA++ F Sbjct: 178 YSKDPAKFEELKVKEIKNGRLALLAIVGF 206
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K RLAML+M F+ +A GK PL Sbjct: 202 DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPL 239
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D E+ +RL+ EIKH R+AMLA++ Sbjct: 59 DQERFDRLRYVEIKHGRIAMLAVV 82
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 32.3 bits (72), Expect = 0.28 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E+ LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 201 DPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 205 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 242
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 174 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 211
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 200 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 237
>FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 198 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D EK +RL+ EIKH R++MLA+ Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAV 78
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 211 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 248
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 143 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 180
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 199 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 236
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 206 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 243
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 238
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 192 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 229
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 32.0 bits (71), Expect = 0.37 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D EK +RL+ EIKH R++MLA+ Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAV 78
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 203 DPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 240
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 31.6 bits (70), Expect = 0.48 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA 292 D + LKV EIK+ RLAM ML FY +A Sbjct: 59 DPDTFPELKVKEIKNGRLAMSGMLGFYAQA 88
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 205 DPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 31.6 bits (70), Expect = 0.48 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D EK +RL+ E+KH R++MLA++ Sbjct: 56 DQEKFDRLRYVELKHGRISMLAVV 79
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM A L F+ +A GK P+ Sbjct: 211 DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPI 248
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E L+V EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 202 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E K+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPL 241
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 241
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 241
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 87 DPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 124
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 31.2 bits (69), Expect = 0.63 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D + ER+++AE+ H RLAMLA++ Sbjct: 33 DPDTFERMRIAEVYHGRLAMLAVV 56 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D ER++VAE+ H RL+MLA++ Sbjct: 402 DPVTFERMQVAEVFHCRLSMLALV 425 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 19/78 (24%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAML----------IFYFEAGQGKTPLG------ALGL*D 250 D + R++VAE+ H RLAML + +FEAG L A+ Sbjct: 218 DPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFEAGDSVDGLKLGFITMAIAAPT 277 Query: 249 DFWLARGG---RKGLLHR 205 ++W +GG +KG L R Sbjct: 278 EYWRGQGGFNWQKGELDR 295
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 30.8 bits (68), Expect = 0.82 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 215 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 252
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 30.8 bits (68), Expect = 0.82 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV IK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.82 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 202 DPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 205 DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E +KV E+K+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 200 DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D + ERL+ E+KH R+AMLA+ Sbjct: 64 DQDGFERLRYVEVKHGRIAMLAI 86
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 25.8 bits (55), Expect(2) = 1.4 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 349 RDQALAPRHACHAHLLLRGRTGQDAARRARSIR 251 RD++L+PR H+H R T + + RS+R Sbjct: 67 RDRSLSPRDQPHSHPRSRSPTPRSQSPSRRSVR 99 Score = 22.7 bits (47), Expect(2) = 1.4 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -1 Query: 386 SPTPRSLSGSRWPRSSTRASP 324 SP+PR GSR P T + P Sbjct: 26 SPSPRDEDGSRSPGERTPSPP 46
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM + L F+ +A GK P+ Sbjct: 190 DPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPV 227
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Frame = -3 Query: 360 LKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 196 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -3 Query: 375 EKLERLKVAEIKHSRLAMLAM 313 EK +RL+ EIKH R+ MLA+ Sbjct: 58 EKFDRLRYVEIKHGRICMLAV 78
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -3 Query: 375 EKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 274 E ++L EIKH R+AMLA + + + GK P Sbjct: 27 ENFKKLAQTEIKHGRVAMLATMGYITQEITGKLP 60
>KITH_RHOSI (Q9ZIG2) Thymidine kinase (EC 2.7.1.21)| Length = 213 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 206 RCNKPFLPPRASQKSSYRPSAPSGVLPCP 292 RC + F PPR + SS + AP+ P P Sbjct: 182 RCRRCFQPPRPTSTSSLKAPAPAATAPRP 210
>HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -3 Query: 351 AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 AE+ + R+AML L E G+ PL ALGL Sbjct: 355 AEVWNGRIAMLGFLALLVELLTGRGPLHALGL 386
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + +KV EIK+ RLAM +M F+ +A GK P+ Sbjct: 215 DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 252
>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 203 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D E+ +RL+ E+KH R+A +A L Sbjct: 55 DQERFDRLRYVEVKHGRIAHVAFL 78
>RPA2_NEUCR (O74633) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)| (RNA polymerase I subunit 2) Length = 1234 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 54 ITWYIRWRKKEYLIPHSIYTRHLKEVTDTD 143 +T+ WRK EYLIP + + L E D + Sbjct: 252 VTFRFSWRKNEYLIPVMMIMKALVETNDRE 281
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 375 EKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 E LKV E+K+ RLAM +M F+ A GK PL Sbjct: 167 EAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPL 202
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM + F+ +A GK P+ Sbjct: 193 DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPI 230
>EMAL2_HUMAN (O95834) Echinoderm microtubule-associated protein-like 2 (EMAP-2)| (HuEMAP-2) Length = 649 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -1 Query: 248 IFGWRAVGERVCCIASDRTHGLNGICSTSNKQQHFICVRDF 126 + G VCC+ +++G N +C+ H + V D+ Sbjct: 152 VLGLGVFDRAVCCVGFSKSNGGNLLCAVDESNDHMLSVWDW 192
>RPA2_SCHPO (Q9P7X8) Probable DNA-directed RNA polymerase I polypeptide 2 (EC| 2.7.7.6) (RNA polymerase I subunit 2) Length = 1227 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +3 Query: 3 IKCLLPILP*ITELGLYIT-----WYIRWRKKEYLIPHSIYTRHLKEVTDTD 143 I+C+ P +T Y+ + WRK EYLIP + + L E +D + Sbjct: 268 IRCVRPDQSSLTNTLHYLNNGVTMFRFHWRKNEYLIPSMMILKALLETSDKE 319
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = -3 Query: 372 KLERLKVAEIKHSRLAMLAMLIFYFE 295 K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 214 KIKELRTKEIKNGRLAMLAVMGAWFQ 239
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = -3 Query: 372 KLERLKVAEIKHSRLAMLAMLIFYFE 295 K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 214 KIKELRTKEIKNGRLAMLAVMGAWFQ 239
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLA +M F+ +A GK P+ Sbjct: 190 DPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPV 227
>HEMH_SYNPX (Q7U5G0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -3 Query: 351 AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 +E+ + RLAML F E G PL ALGL Sbjct: 359 SEVWNGRLAMLGFSAFLLELISGHGPLHALGL 390
>RPA2_ASHGO (Q75DS1) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)| (RNA polymerase I subunit 2) Length = 1198 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +3 Query: 54 ITWYIRWRKKEYLIPHSIYTRHLKEVTDTD 143 +T+ WRK EYL+P + + L + +D + Sbjct: 252 VTFRFSWRKNEYLVPVVLILKALTDASDRE 281
>MURC_BRUSU (P65469) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 471 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Frame = +1 Query: 157 LFDVEQIPFNPCVRSD-----AMQQTLSPTARQPKIIL*TERAERRLALSGLEVEDEHGK 321 L D E I + ++ + A ++ L P R+ +++ R R +A+ G HGK Sbjct: 64 LGDAEVIVVSTAIKKNNPELVAAREKLLPVVRRAEMLAELMRFRRAVAIGGT-----HGK 118 Query: 322 HGE----ARVLDLGHLEPLKLLG 378 A +LD GHL+P + G Sbjct: 119 TTTTSLVAALLDAGHLDPTVING 141
>MURC_BRUME (P65468) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 471 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Frame = +1 Query: 157 LFDVEQIPFNPCVRSD-----AMQQTLSPTARQPKIIL*TERAERRLALSGLEVEDEHGK 321 L D E I + ++ + A ++ L P R+ +++ R R +A+ G HGK Sbjct: 64 LGDAEVIVVSTAIKKNNPELVAAREKLLPVVRRAEMLAELMRFRRAVAIGGT-----HGK 118 Query: 322 HGE----ARVLDLGHLEPLKLLG 378 A +LD GHL+P + G Sbjct: 119 TTTTSLVAALLDAGHLDPTVING 141
>ANFB_FUGRU (Q805D7) Brain natriuretic peptide precursor (B-type natriuretic| peptide) Length = 133 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%) Frame = +3 Query: 120 LKEVTDTDKMLLLVRRRADPIQSM---------RPI*CDATNPFSHRAPAKNHLIDRARR 272 + E T+ D+M+ +P+ SM RP+ +A F KN D +RR Sbjct: 45 MSEETEEDQMVPANSESLEPVGSMKQTANRDQIRPVEVEAIREFLSANTRKNVQNDSSRR 104 Query: 273 AASC 284 ++SC Sbjct: 105 SSSC 108
>HEMH_PROMA (Q7VD58) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -3 Query: 351 AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 AE+ + R+AM +I +FE G PL +GL Sbjct: 359 AEVWNGRVAMFVFIICFFELVIGNGPLHYIGL 390
>FA20A_MOUSE (Q8CID3) Protein FAM20A precursor| Length = 541 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 193 VRSDAMQQTLSPTARQPKIIL*TERAERRLALSGLEVEDEHGKHGEARVLDLG 351 +R ++ LSP +P ++ +RRL + VED HGE RV+ G Sbjct: 477 MRESLLEDQLSPVLTEPHLLA----LDRRLQIILKTVEDCIEAHGERRVIAEG 525 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,872,902 Number of Sequences: 219361 Number of extensions: 1021047 Number of successful extensions: 3031 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 2932 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3031 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
