>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the
           complete sequence
          Length = 249995

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 23  tttatatgtttagcatttttgt 44
           ||||||||||||||||||||||
Sbjct: 296 tttatatgtttagcatttttgt 317

>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence
          Length = 196427

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    agcctggtggagggagaggcc 95
             |||||||||||||||||||||
Sbjct: 64406 agcctggtggagggagaggcc 64426

>dbj|AK165048.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130320P15 product:excision repair
            cross-complementing rodent repair deficiency,
            complementation group 2, full insert sequence
          Length = 5751

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 75   agcctggtggagggagaggcc 95
            |||||||||||||||||||||
Sbjct: 3142 agcctggtggagggagaggcc 3122

>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 69      atcaagagcctggtggaggga 89
               |||||||||||||||||||||
Sbjct: 1008224 atcaagagcctggtggaggga 1008204

>gb|L47235.1|MUSXPDG1 Mus musculus ERCC2 gene, genomic sequence
          Length = 32595

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    agcctggtggagggagaggcc 95
             |||||||||||||||||||||
Sbjct: 20474 agcctggtggagggagaggcc 20454

>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence
          Length = 222682

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    gcctggtggagggagaggccagtg 99
             |||||||||| |||||||||||||
Sbjct: 12171 gcctggtggaaggagaggccagtg 12148

>gb|AC150694.2| Bos taurus  BAC CH240-144A17 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 163920

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     actttttatatgtttagcat 38
              ||||||||||||||||||||
Sbjct: 158516 actttttatatgtttagcat 158535

>emb|AL356785.18| Human DNA sequence from clone RP13-206I21 on chromosome Xp11.3-21.1
             Contains part of the ATP11C gene for ATPase, Class VI,
             type 11C (ATPIG, ATPIQ), complete sequence
          Length = 165572

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    tttagcatttttgtgaccaa 50
             ||||||||||||||||||||
Sbjct: 57583 tttagcatttttgtgaccaa 57564

>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence
          Length = 189250

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     tttttatatgtttagcatttttgt 44
              ||||||||||||||| ||||||||
Sbjct: 109185 tttttatatgtttaggatttttgt 109162

>emb|AL158066.12| Human DNA sequence from clone RP11-64P12 on chromosome 13q14.2-21.2
              Contains part of a novel gene, a mitochondrial ribosomal
              protein S31 (MRPS31) pseudogene and two CpG islands,
              complete sequence
          Length = 138201

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    ggcctcaagttcagcagctt 210
              ||||||||||||||||||||
Sbjct: 106637 ggcctcaagttcagcagctt 106618

>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3'
              end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B,
              two novel genes, the 5' end of the HARS2 gene for
              histidyl-tRNA synthetase 2, a pseudogene similar to part of
              homeobox proteins and two CpG islands, complete sequence
          Length = 149933

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    taaggcctcaagttcagcag 207
              ||||||||||||||||||||
Sbjct: 109224 taaggcctcaagttcagcag 109205

>gb|AC021010.8| Homo sapiens, clone RP11-69D2, complete sequence
          Length = 187599

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 18     aactttttatatgtttagcatttt 41
              ||||||||||||||| ||||||||
Sbjct: 129608 aactttttatatgttcagcatttt 129585

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     caagttcagcagcttcacct 215
               ||||||||||||||||||||
Sbjct: 2490355 caagttcagcagcttcacct 2490336

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 182      tacctgtaaggcctcaagtt 201
                ||||||||||||||||||||
Sbjct: 10306927 tacctgtaaggcctcaagtt 10306908

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 182      tacctgtaaggcctcaagtt 201
                ||||||||||||||||||||
Sbjct: 19938441 tacctgtaaggcctcaagtt 19938422

>emb|AL731578.2|OSJN00229 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017P10,
              complete sequence
          Length = 175563

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    tacctgtaaggcctcaagtt 201
              ||||||||||||||||||||
Sbjct: 131142 tacctgtaaggcctcaagtt 131123

>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0036M16
          Length = 158880

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    tacctgtaaggcctcaagtt 201
              ||||||||||||||||||||
Sbjct: 103091 tacctgtaaggcctcaagtt 103072

>gb|AC127366.4| Mus musculus BAC clone RP23-10E9 from 8, complete sequence
          Length = 177375

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    gcctggtggagggagaggccagtg 99
             |||||||||| |||||||||||||
Sbjct: 56346 gcctggtggaaggagaggccagtg 56323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,900,828
Number of Sequences: 3902068
Number of extensions: 1900828
Number of successful extensions: 42538
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42461
Number of HSP's gapped (non-prelim): 77
length of query: 230
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 208
effective length of database: 17,147,199,772
effective search space: 3566617552576
effective search space used: 3566617552576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)