Clone Name | rbaet98f05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC093877.3| Homo sapiens BAC clone RP11-637G19 from 4, complete sequence Length = 162150 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 agggaggcgagctgggagcaa 99 ||||||||||||||||||||| Sbjct: 139765 agggaggcgagctgggagcaa 139785
>emb|Z82204.1|HS362G17 Human DNA sequence from clone RP3-362G17 on chromosome X Contains part of the FGF13 gene for fibroblast growth factor 13, complete sequence Length = 75145 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tggtactagaaacatttctt 143 |||||||||||||||||||| Sbjct: 71740 tggtactagaaacatttctt 71759
>emb|BX005005.19| Zebrafish DNA sequence from clone DKEY-70O15 in linkage group 13, complete sequence Length = 153184 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ctgttatcactatgacatct 176 |||||||||||||||||||| Sbjct: 91093 ctgttatcactatgacatct 91074
>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5, complete sequence Length = 197143 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 taataacggaaatacaattttttg 54 ||||||||| |||||||||||||| Sbjct: 108439 taataacgggaatacaattttttg 108416
>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence Length = 163871 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgatgggaaggaagggaggc 86 |||||||||||||||||||| Sbjct: 148154 tgatgggaaggaagggaggc 148173
>emb|AL935051.8| Zebrafish DNA sequence from clone CH211-173A19 in linkage group 5, complete sequence Length = 122151 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 taataacggaaatacaattttttg 54 ||||||||| |||||||||||||| Sbjct: 90403 taataacgggaatacaattttttg 90426
>dbj|D16472.1|HUMXQF Human mRNA, Xq terminal portion Length = 3616 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tggtactagaaacatttctt 143 |||||||||||||||||||| Sbjct: 2644 tggtactagaaacatttctt 2663
>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence Length = 193998 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 gaagggaggcgagctggga 95 ||||||||||||||||||| Sbjct: 141756 gaagggaggcgagctggga 141774
>gb|AC110512.13| Mus musculus chromosome 15, clone RP24-134E9, complete sequence Length = 163319 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 gcatagttgatgggaagga 78 ||||||||||||||||||| Sbjct: 24446 gcatagttgatgggaagga 24464
>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence Length = 143937 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 138 tttcttagggggcgaaaac 156 ||||||||||||||||||| Sbjct: 19050 tttcttagggggcgaaaac 19068
>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence Length = 143943 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 tttcttagggggcgaaaac 156 ||||||||||||||||||| Sbjct: 124894 tttcttagggggcgaaaac 124876
>emb|CR759874.20| Zebrafish DNA sequence from clone CH211-214H24 in linkage group 20, complete sequence Length = 223471 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 acaattttttgatagagca 62 ||||||||||||||||||| Sbjct: 35891 acaattttttgatagagca 35873
>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7, complete sequence Length = 154034 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 159 gttatcactatgacatctc 177 ||||||||||||||||||| Sbjct: 39078 gttatcactatgacatctc 39060
>gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete sequence Length = 171124 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 cagttactttaataacggaaata 44 ||||||||||||||||| ||||| Sbjct: 35889 cagttactttaataacgaaaata 35867
>emb|AL512602.8| Human DNA sequence from clone RP11-111M7 on chromosome 9, complete sequence Length = 35187 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 gatgggaaggaagggaggc 86 ||||||||||||||||||| Sbjct: 7691 gatgggaaggaagggaggc 7673
>emb|BX927303.11| Zebrafish DNA sequence from clone CH211-67L13 in linkage group 6, complete sequence Length = 163380 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 158 tgttatcactatgacatct 176 ||||||||||||||||||| Sbjct: 48894 tgttatcactatgacatct 48876
>emb|BX649495.8| Zebrafish DNA sequence from clone DKEY-177B16 in linkage group 2, complete sequence Length = 81705 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 158 tgttatcactatgacatct 176 ||||||||||||||||||| Sbjct: 65368 tgttatcactatgacatct 65350
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 tttcttagggggcgaaaac 156 ||||||||||||||||||| Sbjct: 23372 tttcttagggggcgaaaac 23354
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 gcatagttgatgggaagga 78 ||||||||||||||||||| Sbjct: 1342328 gcatagttgatgggaagga 1342346
>gb|AC005171.3| Arabidopsis thaliana chromosome 2 clone T4E14 map mi310, complete sequence Length = 138181 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 aggaagggaggcgagctgg 93 ||||||||||||||||||| Sbjct: 86581 aggaagggaggcgagctgg 86563
>gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome 1, complete sequence Length = 162838 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 cagttactttaataacggaaata 44 ||||||||||||||||| ||||| Sbjct: 65313 cagttactttaataacgaaaata 65291
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 aataacatgaaacccgcta 116 ||||||||||||||||||| Sbjct: 129080 aataacatgaaacccgcta 129062
>gb|AC093763.3| Homo sapiens BAC clone RP11-91J3 from 4, complete sequence Length = 154684 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 71 gggaaggaagggaggcgag 89 ||||||||||||||||||| Sbjct: 101545 gggaaggaagggaggcgag 101527
>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence Length = 192176 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 gcatagttgatgggaagga 78 ||||||||||||||||||| Sbjct: 136565 gcatagttgatgggaagga 136583
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 actttaataacggaaatac 45 ||||||||||||||||||| Sbjct: 2170502 actttaataacggaaatac 2170520
>emb|BX255962.9| Zebrafish DNA sequence from clone CH211-269C21 in linkage group 25, complete sequence Length = 151830 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 158 tgttatcactatgacatct 176 ||||||||||||||||||| Sbjct: 68677 tgttatcactatgacatct 68695
>emb|BX005083.10| Zebrafish DNA sequence from clone CH211-220F13 in linkage group 2, complete sequence Length = 212081 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 taacggaaatacaattttt 52 ||||||||||||||||||| Sbjct: 88501 taacggaaatacaattttt 88519
>emb|CR388011.14| Zebrafish DNA sequence from clone CH211-135J15 in linkage group 19, complete sequence Length = 163300 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 158 tgttatcactatgacatct 176 ||||||||||||||||||| Sbjct: 98555 tgttatcactatgacatct 98537
>emb|BX908398.10| Zebrafish DNA sequence from clone CH211-231A1 in linkage group 22, complete sequence Length = 118923 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 158 tgttatcactatgacatct 176 ||||||||||||||||||| Sbjct: 89714 tgttatcactatgacatct 89732
>emb|BX927137.9| Zebrafish DNA sequence from clone DKEY-30L13 in linkage group 18, complete sequence Length = 48500 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 158 tgttatcactatgacatct 176 ||||||||||||||||||| Sbjct: 7139 tgttatcactatgacatct 7157
>emb|AL928920.5| Zebrafish DNA sequence from clone DKEY-14A7 in linkage group 20, complete sequence Length = 195351 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 158 tgttatcactatgacatct 176 ||||||||||||||||||| Sbjct: 85557 tgttatcactatgacatct 85539
>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete sequence Length = 271178 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 aataacatgaaacccgcta 116 ||||||||||||||||||| Sbjct: 69332 aataacatgaaacccgcta 69314
>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence Length = 163121 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 159 gttatcactatgacatctc 177 ||||||||||||||||||| Sbjct: 32246 gttatcactatgacatctc 32228 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,810,501 Number of Sequences: 3902068 Number of extensions: 1810501 Number of successful extensions: 160257 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 160154 Number of HSP's gapped (non-prelim): 103 length of query: 181 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 159 effective length of database: 17,147,199,772 effective search space: 2726404763748 effective search space used: 2726404763748 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)