ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, p... 194 1e-46
2gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, par... 186 3e-44
3emb|AJ003141.1|HVAJ3141 Hordeum vulgare mRNA for stress-related ... 127 2e-26
4emb|AJ878510.1| Triticum aestivum mRNA for peroxidase precursor ... 121 1e-24
5emb|X62438.1|HVPERO H.vulgare mRNA for peroxidase 119 6e-24
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
7dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
8tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 52 0.001
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
10emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa... 52 0.001
11emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 52 0.001
12ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predic... 50 0.004
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
14dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
15dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
16dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
17dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
18tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 50 0.004
19ref|XM_476365.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.26
20gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.26
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
23dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group) mRN... 44 0.26
24dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
25dbj|AK107894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
26dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
27dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
28tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.26
29tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.26
30ref|XM_462938.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.0
31gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosom... 42 1.0
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.0
33emb|AM055592.1| Tomato aspermy virus CP gene for coat protein, g... 42 1.0
34gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.0
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
36dbj|AK122030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
37dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
38dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
39dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
40dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
41dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
42dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
43dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
44dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
45dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
46dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
47dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
48dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
49tpe|BN000578.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.0
50tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.0
51gb|AC114641.6| Mus musculus chromosome 3, clone RP24-126N3, comp... 40 4.1
52gb|AC165974.4| Mus musculus BAC clone RP23-16J4 from chromosome ... 40 4.1
53gb|AC152565.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 4.1
54gb|AC110256.12| Mus musculus chromosome 6, clone RP23-274K3, com... 40 4.1
55gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete seq... 40 4.1
56emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.1
57emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 4.1
58emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 4.1
59gb|AC116733.19| Mus musculus chromosome 3, clone RP23-349K2, com... 40 4.1
60gb|AC025030.14|AC025030 Homo sapiens 12 BAC RP11-46I1 (Roswell P... 40 4.1
61emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on ch... 40 4.1 
>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds
          Length = 1308

 Score =  194 bits (98), Expect = 1e-46
 Identities = 146/162 (90%)
 Strand = Plus / Minus

                                                                        
Query: 151  cacgcgtgagctagcatggacgattaaccaatctctcacatggcggcggcgtgtccctcg 210
            ||||||||||||||||| ||  | ||||  ||||||||||||||||| | ||| ||||||
Sbjct: 1088 cacgcgtgagctagcatcgataactaactgatctctcacatggcggccgtgtggccctcg 1029

                                                                        
Query: 211  tcgttggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatc 270
            |||||||||||||||||  | ||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1028 tcgttggcggtctcgatgacatcgacgcgcctattggggacggcgcagttctgccggatc 969

                                                      
Query: 271  tcgccctgggtgccggtgagcaagtccatgttgctcatcttc 312
            || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 968  tcaccctgggtgccagtgagcaagtccatgttgctcatcttc 927



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 88   attttattacaacacgaacgacgactggacaaaacgactagcagaaggacaccatctcca 147
            |||||||||||||||| ||||| |||| | ||||||||||||| ||||||||||||||||
Sbjct: 1174 attttattacaacacgtacgacaactgcagaaaacgactagcacaaggacaccatctcca 1115

                
Query: 148  gtgc 151
            ||||
Sbjct: 1114 gtgc 1111
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>gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, partial cds
          Length = 760

 Score =  186 bits (94), Expect = 3e-44
 Identities = 127/138 (92%)
 Strand = Plus / Minus

                                                                       
Query: 175 taaccaatctctcacatggcggcggcgtgtccctcgtcgttggcggtctcgataccctcg 234
           |||||||||||| ||||||||||||| || ||||||||| ||||||||||||| |||| |
Sbjct: 628 taaccaatctcttacatggcggcggcatggccctcgtcgctggcggtctcgatgcccttg 569

                                                                       
Query: 235 acacgcctgttggggacggcgcagttctgccggatctcgccctgggtgccggtgagcaag 294
           ||||| ||||||||||||||||||||   |||||||||||||||| ||||||||||||||
Sbjct: 568 acacggctgttggggacggcgcagttgaaccggatctcgccctggctgccggtgagcaag 509

                             
Query: 295 tccatgttgctcatcttc 312
           ||||||||||||||||||
Sbjct: 508 tccatgttgctcatcttc 491
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>emb|AJ003141.1|HVAJ3141 Hordeum vulgare mRNA for stress-related peroxidase
          Length = 1245

 Score =  127 bits (64), Expect = 2e-26
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                        
Query: 216  ggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatctcgcc 275
            ||||||||||||  ||| ||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1082 ggcggtctcgatgtcctggacacgcctgttggggacggcgcagttgttccggatctcgcc 1023

                                                
Query: 276  ctgggtgccggtgagcaagtccatgttgctcatctt 311
            || |||||||||||| | ||||||||||||||||||
Sbjct: 1022 cttggtgccggtgagaatgtccatgttgctcatctt 987
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>emb|AJ878510.1| Triticum aestivum mRNA for peroxidase precursor (prx gene), cultivar
            Cheyenne
          Length = 1226

 Score =  121 bits (61), Expect = 1e-24
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                        
Query: 215  tggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatctcgc 274
            |||||||||||||| ||| |||||||||||||||| |||||||||| | |||||||||||
Sbjct: 1070 tggcggtctcgatatcctggacacgcctgttgggggcggcgcagttgttccggatctcgc 1011

                                                 
Query: 275  cctgggtgccggtgagcaagtccatgttgctcatctt 311
            ||| | |||||||||| | ||||||||||||||||||
Sbjct: 1010 ccttgttgccggtgaggaggtccatgttgctcatctt 974
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>emb|X62438.1|HVPERO H.vulgare mRNA for peroxidase
          Length = 740

 Score =  119 bits (60), Expect = 6e-24
 Identities = 88/96 (91%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                       
Query: 216 ggcggtctcgataccctcgacacgcctgttggggacggcgcagttctgccggatctcgcc 275
           ||||||||||||  ||| ||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 485 ggcggtctcgatgtcct-gacacgcctgttggggacggcgcagttgttccggatctcgcc 427

                                               
Query: 276 ctgggtgccggtgagcaagtccatgttgctcatctt 311
           || |||||||||||| | ||||||||||||||||||
Sbjct: 426 cttggtgccggtgagaatgtccatgttgctcatctt 391
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 255      gcagttctgccggatctcgccctgggtgccggtgagca 292
                |||||||| ||||||||||||||||  |||||||||||
Sbjct: 20926200 gcagttcttccggatctcgccctggtcgccggtgagca 20926237
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>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full
            insert sequence
          Length = 1325

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 255  gcagttctgccggatctcgccctgggtgccggtgagca 292
            |||||||| ||||||||||||||||  |||||||||||
Sbjct: 1110 gcagttcttccggatctcgccctggtcgccggtgagca 1073
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>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene for
            class III peroxidase 138 precursor, exons 1-4
          Length = 9140

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 255  gcagttctgccggatctcgccctgggtgccggtgagca 292
            |||||||| ||||||||||||||||  |||||||||||
Sbjct: 9119 gcagttcttccggatctcgccctggtcgccggtgagca 9082
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 255      gcagttctgccggatctcgccctgggtgccggtgagca 292
                |||||||| ||||||||||||||||  |||||||||||
Sbjct: 20852414 gcagttcttccggatctcgccctggtcgccggtgagca 20852451
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>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 182172

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 255   gcagttctgccggatctcgccctgggtgccggtgagca 292
             |||||||| ||||||||||||||||  |||||||||||
Sbjct: 11690 gcagttcttccggatctcgccctggtcgccggtgagca 11727
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 255   gcagttctgccggatctcgccctgggtgccggtgagca 292
             |||||||| ||||||||||||||||  |||||||||||
Sbjct: 32795 gcagttcttccggatctcgccctggtcgccggtgagca 32758
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>ref|NM_183816.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1062

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 263 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
           |||||||||| ||| ||| ||||||||||| ||| ||||||| ||||||
Sbjct: 955 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 907
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 263      gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
                |||||||||| ||| ||| ||||||||||| ||| ||||||| ||||||
Sbjct: 12552449 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 12552401
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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 263   gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
             |||||||||| ||| ||| ||||||||||| ||| ||||||| ||||||
Sbjct: 64059 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 64011
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>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1135C02
          Length = 152306

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 263    gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
              |||||||||| ||| ||| ||||||||||| ||| ||||||| ||||||
Sbjct: 138064 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 138016
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>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full
            insert sequence
          Length = 1492

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 263  gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
            |||||||||| ||| ||| ||||||||||| ||| ||||||| ||||||
Sbjct: 1030 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 982
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>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full
           insert sequence
          Length = 1015

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 263 gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
           |||||||||| ||| ||| ||||||||||| ||| ||||||| ||||||
Sbjct: 719 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 671
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>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for
            class III peroxidase 15 precursor, exons 1-3
          Length = 5322

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 263  gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
            |||||||||| ||| ||| ||||||||||| ||| ||||||| ||||||
Sbjct: 5215 gccggatctccccccgggcgccggtgagcacgtcgatgttgcccatctt 5167
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>ref|XM_476365.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 744

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 267 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttc 312
           |||||||||||| |  |||||||||| ||| ||| |||||||||||
Sbjct: 489 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttc 444
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>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 267   gatctcgccctgggtgccggtgagca 292
             ||||||||||||| ||||||||||||
Sbjct: 42111 gatctcgccctggctgccggtgagca 42086
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 267    gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttc 312
              |||||||||||| |  |||||||||| ||| ||| |||||||||||
Sbjct: 236074 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttc 236029
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 267      gatctcgccctgggtgccggtgagca 292
                ||||||||||||| ||||||||||||
Sbjct: 24439438 gatctcgccctggctgccggtgagca 24439413
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>dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group) mRNA for peroxidase, complete
            cds
          Length = 1325

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 267  gatctcgccctgggtgccggtgagca 292
            ||||||||||||| ||||||||||||
Sbjct: 1019 gatctcgccctggctgccggtgagca 994
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 267   gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttc 312
             |||||||||||| |  |||||||||| ||| ||| |||||||||||
Sbjct: 70938 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttc 70893
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>dbj|AK107894.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E12, full
           insert sequence
          Length = 744

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 267 gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttc 312
           |||||||||||| |  |||||||||| ||| ||| |||||||||||
Sbjct: 489 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttc 444
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>dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-A02, full
            insert sequence
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 267  gatctcgccctgggtgccggtgagca 292
            ||||||||||||| ||||||||||||
Sbjct: 1048 gatctcgccctggctgccggtgagca 1023
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>dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082J20, full
            insert sequence
          Length = 1348

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 267  gatctcgccctgggtgccggtgagca 292
            ||||||||||||| ||||||||||||
Sbjct: 1049 gatctcgccctggctgccggtgagca 1024
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>tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx97 gene for
            class III peroxidase 97 precursor, exons 1-2
          Length = 1107

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 267  gatctcgccctgggtgccggtgagcaagtccatgttgctcatcttc 312
            |||||||||||| |  |||||||||| ||| ||| |||||||||||
Sbjct: 1077 gatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttc 1032
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>tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx74 gene for
            class III peroxidase 74 precursor, exons 1-4
          Length = 1311

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 267  gatctcgccctgggtgccggtgagca 292
            ||||||||||||| ||||||||||||
Sbjct: 1284 gatctcgccctggctgccggtgagca 1259
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>ref|XM_462938.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1115

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 264  ccggatctcgccctgggtgccggtgagca 292
            ||||||||| |||||| ||||||||||||
Sbjct: 1091 ccggatctccccctggctgccggtgagca 1063
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>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11
             map R606A, complete sequence
          Length = 163580

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 264   ccggatctcgccctgggtgccggtgagca 292
             ||||||||| |||||| ||||||||||||
Sbjct: 55180 ccggatctccccctggctgccggtgagca 55208
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 264      ccggatctcgccctgggtgccggtgagca 292
                ||||||||| |||||| ||||||||||||
Sbjct: 20076833 ccggatctccccctggctgccggtgagca 20076805



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 267      gatctcgccctgggtgccggtgagc 291
                |||||||||||| ||||||||||||
Sbjct: 12591358 gatctcgccctgcgtgccggtgagc 12591334
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>emb|AM055592.1| Tomato aspermy virus CP gene for coat protein, genomic RNA
          Length = 657

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 106 cgacgactggacaaaacgact 126
           |||||||||||||||||||||
Sbjct: 376 cgacgactggacaaaacgact 396
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>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 267   gatctcgccctgggtgccggtgagc 291
             |||||||||||| ||||||||||||
Sbjct: 85631 gatctcgccctgcgtgccggtgagc 85655
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 264      ccggatctcgccctgggtgccggtgagca 292
                ||||||||| |||||| ||||||||||||
Sbjct: 20069861 ccggatctccccctggctgccggtgagca 20069833



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 267      gatctcgccctgggtgccggtgagc 291
                |||||||||||| ||||||||||||
Sbjct: 12588121 gatctcgccctgcgtgccggtgagc 12588097
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>dbj|AK122030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112F15, full
            insert sequence
          Length = 1405

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 264  ccggatctcgccctgggtgccggtgagca 292
            ||||||||| |||||| ||||||||||||
Sbjct: 1156 ccggatctccccctggctgccggtgagca 1128
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>dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D07, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H05, full
            insert sequence
          Length = 1265

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G09, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G05, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C02, full
            insert sequence
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B03, full
            insert sequence
          Length = 1215

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D07, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C06, full
            insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1027 gatctcgccctgcgtgccggtgagc 1003
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>dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C01, full
            insert sequence
          Length = 1264

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1024 gatctcgccctgcgtgccggtgagc 1000
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>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full
            insert sequence
          Length = 1271

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 263  gccggatctcgccctgggtgccggtgagcaagtccatgttgctcatctt 311
            |||||||||| ||| ||| ||||||||||| ||  ||||||| ||||||
Sbjct: 1025 gccggatctccccccgggcgccggtgagcacgttgatgttgcccatctt 977
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>dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O18, full
            insert sequence
          Length = 1263

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 1023 gatctcgccctgcgtgccggtgagc 999
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>dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A04, full
           insert sequence
          Length = 1031

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 267 gatctcgccctgggtgccggtgagc 291
           |||||||||||| ||||||||||||
Sbjct: 791 gatctcgccctgcgtgccggtgagc 767
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>tpe|BN000578.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx49 gene for
            class III peroxidase 49 precursor, exons 1-4
          Length = 5136

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 264  ccggatctcgccctgggtgccggtgagca 292
            ||||||||| |||||| ||||||||||||
Sbjct: 5112 ccggatctccccctggctgccggtgagca 5084
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>tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx41 gene for
            class III peroxidase 41 precursor, exons 1-4
          Length = 5018

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 267  gatctcgccctgggtgccggtgagc 291
            |||||||||||| ||||||||||||
Sbjct: 4991 gatctcgccctgcgtgccggtgagc 4967
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>gb|AC114641.6| Mus musculus chromosome 3, clone RP24-126N3, complete sequence
          Length = 86553

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    gatatactctgagcacccac 82
             ||||||||||||||||||||
Sbjct: 69292 gatatactctgagcacccac 69311
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>gb|AC165974.4| Mus musculus BAC clone RP23-16J4 from chromosome 6, complete sequence
          Length = 237816

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     atatactctgagcacccact 83
              ||||||||||||||||||||
Sbjct: 225409 atatactctgagcacccact 225428
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>gb|AC152565.1| Ornithorhynchus anatinus chromosome UNK clone OABb-145A1, complete
             sequence
          Length = 135384

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    cactcatcattttattacaa 99
             ||||||||||||||||||||
Sbjct: 80644 cactcatcattttattacaa 80663
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>gb|AC110256.12| Mus musculus chromosome 6, clone RP23-274K3, complete sequence
          Length = 240425

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    atatactctgagcacccact 83
             ||||||||||||||||||||
Sbjct: 64294 atatactctgagcacccact 64313
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>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence
          Length = 139792

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      ggagagagtacaaggtttaa 27
              ||||||||||||||||||||
Sbjct: 126474 ggagagagtacaaggtttaa 126493
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>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    ctcgataccctcgacacgcc 241
              ||||||||||||||||||||
Sbjct: 117972 ctcgataccctcgacacgcc 117953
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    ctcgataccctcgacacgcc 241
              ||||||||||||||||||||
Sbjct: 121932 ctcgataccctcgacacgcc 121913
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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    ctcgataccctcgacacgcc 241
              ||||||||||||||||||||
Sbjct: 182963 ctcgataccctcgacacgcc 182944
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>gb|AC116733.19| Mus musculus chromosome 3, clone RP23-349K2, complete sequence
          Length = 209244

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gatatactctgagcacccac 82
              ||||||||||||||||||||
Sbjct: 186847 gatatactctgagcacccac 186828
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>gb|AC025030.14|AC025030 Homo sapiens 12 BAC RP11-46I1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170921

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aatggagagagtacaaggtt 24
             ||||||||||||||||||||
Sbjct: 13940 aatggagagagtacaaggtt 13959
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>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete
             sequence
          Length = 208805

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ctctgagcacccactcatca 88
             ||||||||||||||||||||
Sbjct: 76487 ctctgagcacccactcatca 76468


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,062,006
Number of Sequences: 3902068
Number of extensions: 2062006
Number of successful extensions: 38225
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37933
Number of HSP's gapped (non-prelim): 292
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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