ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 83 2e-16
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 64 9e-11
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 60 1e-09
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 49 3e-06
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 46 3e-05
6CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 44 1e-04
7CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 44 1e-04
8CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 44 1e-04
9CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 43 2e-04
10CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 43 2e-04
11CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 39 0.003
12CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.009
13CONB_CANEN (P49347) Concanavalin B precursor (Con B) 37 0.015
14CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Solub... 30 1.1
15CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14) 30 1.1
16HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 30 1.4
17VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) 29 3.2
18WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824 28 4.2
19MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 28 4.2
20FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor 28 4.2
21FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Floccul... 28 7.2
22CILA_KLEPN (P45413) Citrate lyase alpha chain (EC 4.1.3.6) (Citr... 28 7.2
23PPID_MOUSE (Q9CR16) 40 kDa peptidyl-prolyl cis-trans isomerase (... 27 9.3
24SP1_HORSE (P81121) Seminal plasma protein HSP-1 27 9.3
25NFASC_CHICK (O42414) Neurofascin precursor 27 9.3
26LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precurso... 27 9.3
27CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14) 27 9.3

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 35/59 (59%), Positives = 46/59 (77%)
 Frame = -1

Query: 365 AAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           AAYP+ + Y+GL A ++   +VHPKN+YYGV  V QK  NYGG+M+W+RY DK+TNYSS
Sbjct: 240 AAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



to top

>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = -1

Query: 365 AAYPSAQIYLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192
           A YP + +YLGL A+    K   V  K LYY ++  VQKA NYGG+M+W+R+ DK+T Y 
Sbjct: 238 ARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYG 297

Query: 191 SYAIQWA 171
                WA
Sbjct: 298 KTVKYWA 304



to top

>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = -1

Query: 365 AAYPSAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192
           AA+P +++Y+GL AS EQ   ++  K+LYY ++Q V+   NYGG+ +++RY DK+ NY+
Sbjct: 229 AAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



to top

>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = -1

Query: 353 SAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           + +I+LGLPA+ +  G  YV P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 237 AGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



to top

>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = -1

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           + +LGLPA+ +  G  Y+ P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 242 KFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



to top

>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
 Frame = -1

Query: 356 PSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           P+ ++Y+GLPA++   G  Y+  + L   V+  ++ ++ YGGVM+W R  D +  YSS
Sbjct: 231 PAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



to top

>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -1

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           ++GLPAS    G  ++    L   ++ V++++  YGGVM+W +Y D ++ YSS
Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



to top

>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = -1

Query: 347 QIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           Q++LG+PAS+      G +    L   V+  ++ +  YGGVM+W+R+ D ++ YS+
Sbjct: 232 QVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



to top

>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -1

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180
           Q++LG+PAS    G  ++    L   V+  ++ ++ YGGVM+W+R+ D ++ YS   I
Sbjct: 238 QLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



to top

>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
 Frame = -1

Query: 362 AYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210
           A+P++++Y+GLPA+ +     G++    L   V+  ++ ++NYGGVM+W +  D
Sbjct: 227 AFPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280



to top

>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -1

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           QI+LGLPAS    G  ++    L   V+  ++ +A YGGVM+W +  D  + YSS
Sbjct: 235 QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287



to top

>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -1

Query: 362 AYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           A  + +I+LGLPA++   G  ++    L   V+ ++  +  YGGVM+W ++ D    YSS
Sbjct: 228 AIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285



to top

>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
 Frame = -1

Query: 365 AAYP-SAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRT 201
           + YP    ++L LPAS+      GY+ P  L   V+  +      Y G+ +W R  DK T
Sbjct: 239 SVYPRDKNLFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKET 298

Query: 200 NYSSYAIQW 174
            YS+  I++
Sbjct: 299 GYSTNIIRY 307



to top

>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall|
           protein 2)
          Length = 562

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -1

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222
           +++LGLP S    G  Y+   +L    I  +  ++++GG+ +W+
Sbjct: 243 KLFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286



to top

>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)|
          Length = 860

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 356 PSAQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 222
           P A++++GLPAS+    K  Y+ P      V   + K  + +GG+MVWE
Sbjct: 267 PLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315



to top

>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252
           A  +++GYVHP   YYG +  VQ A
Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126



to top

>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)|
          Length = 623

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174
           P  +  GV++V++    Y GV +W  R  D  + Y+++ + W
Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319



to top

>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824|
          Length = 506

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 365 AAYPSAQIYLGLPASEQKVGYV 300
           A +PSA +Y   PA  +KVG+V
Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474



to top

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -3

Query: 303  RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187
            RSS  P  RR  GGA GG   RG G   L+  A  ++ L
Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064



to top

>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor|
          Length = 873

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 194
           +QR  T+A Y        + GSWSG     SGQ+T
Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647



to top

>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 292 RTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATPSNG 173
           RT TTAS       P     W+G  T TS ++T  T +NG
Sbjct: 313 RTPTTASTITTTTEP-----WTGTFTSTSTEMTTVTGTNG 347



to top

>CILA_KLEPN (P45413) Citrate lyase alpha chain (EC 4.1.3.6) (Citrase alpha|
           chain) (Citrate (pro-3S)-lyase alpha chain) (Citrate
           CoA-transferase subunit) (EC 2.8.3.10)
          Length = 508

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -3

Query: 357 SVGADLPRAAGVRAEGRLRSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQLR 184
           + GADL         GR+    E +L R T GA    L   HG+     + D +  LR
Sbjct: 397 AAGADLTIITAPLVRGRIPCVVEKVLTRVTPGASVDVLVTDHGIAVNPARQDLIDNLR 454



to top

>PPID_MOUSE (Q9CR16) 40 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-40) (CYP-40)
          Length = 369

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +2

Query: 41  YKAHNFTLAILIHCKVSKHMHMHMQYTDGYNKSTR*RSERRRVKPIGWRSCCNLSAC 211
           +K+ N+ +AI  + KV       ++Y D  +K+   +++R R++PI      N+ AC
Sbjct: 233 FKSQNWEMAIKKYAKV-------LRYVDS-SKAVIEKADRSRLQPIALSCVLNIGAC 281



to top

>SP1_HORSE (P81121) Seminal plasma protein HSP-1|
          Length = 120

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 289 TSTTASYRWCRRRPTMAGSW 230
           T T + YRWC    T +GSW
Sbjct: 49  TRTDSFYRWCSLTGTYSGSW 68



to top

>NFASC_CHICK (O42414) Neurofascin precursor|
          Length = 1369

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -2

Query: 298  IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATP---SNGLDPPSLRSSP 143
            +QRT   + YR+  R  T  G     V  +   +  ATP   S  L PP+   +P
Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTP 1069



to top

>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor|
           1)
          Length = 909

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198
           HP  LY  +  V+     +GG +VW+ +  K TN
Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867



to top

>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 583

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = -1

Query: 347 QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 222
           ++++G+PA+    GYV    L    I+ ++  +++ GV +W+
Sbjct: 239 KLFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFAGVSLWD 279


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,533,317
Number of Sequences: 219361
Number of extensions: 877767
Number of successful extensions: 2928
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2920
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top