Clone Name | rbaet98e11 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 82.8 bits (203), Expect = 2e-16 Identities = 35/59 (59%), Positives = 46/59 (77%) Frame = -1 Query: 365 AAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 AAYP+ + Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY DK+TNYSS Sbjct: 240 AAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 63.9 bits (154), Expect = 9e-11 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -1 Query: 365 AAYPSAQIYLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192 A YP + +YLGL A+ K V K LYY ++ VQKA NYGG+M+W+R+ DK+T Y Sbjct: 238 ARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYG 297 Query: 191 SYAIQWA 171 WA Sbjct: 298 KTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 60.1 bits (144), Expect = 1e-09 Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 1/59 (1%) Frame = -1 Query: 365 AAYPSAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192 AA+P +++Y+GL AS EQ ++ K+LYY ++Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 229 AAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 48.9 bits (115), Expect = 3e-06 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%) Frame = -1 Query: 353 SAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + +I+LGLPA+ + G YV P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 237 AGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = -1 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 242 KFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 43.9 bits (102), Expect = 1e-04 Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Frame = -1 Query: 356 PSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 P+ ++Y+GLPA++ G Y+ + L V+ ++ ++ YGGVM+W R D + YSS Sbjct: 231 PAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 43.9 bits (102), Expect = 1e-04 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Frame = -1 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 ++GLPAS G ++ L ++ V++++ YGGVM+W +Y D ++ YSS Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Frame = -1 Query: 347 QIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 Q++LG+PAS+ G + L V+ ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 232 QVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 43.1 bits (100), Expect = 2e-04 Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Frame = -1 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180 Q++LG+PAS G ++ L V+ ++ ++ YGGVM+W+R+ D ++ YS I Sbjct: 238 QLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 3/54 (5%) Frame = -1 Query: 362 AYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210 A+P++++Y+GLPA+ + G++ L V+ ++ ++NYGGVM+W + D Sbjct: 227 AFPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = -1 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 QI+LGLPAS G ++ L V+ ++ +A YGGVM+W + D + YSS Sbjct: 235 QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Frame = -1 Query: 362 AYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 A + +I+LGLPA++ G ++ L V+ ++ + YGGVM+W ++ D YSS Sbjct: 228 AIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 36.6 bits (83), Expect = 0.015 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Frame = -1 Query: 365 AAYP-SAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRT 201 + YP ++L LPAS+ GY+ P L V+ + Y G+ +W R DK T Sbjct: 239 SVYPRDKNLFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKET 298 Query: 200 NYSSYAIQW 174 YS+ I++ Sbjct: 299 GYSTNIIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = -1 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222 +++LGLP S G Y+ +L I + ++++GG+ +W+ Sbjct: 243 KLFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = -1 Query: 356 PSAQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 222 P A++++GLPAS+ K Y+ P V + K + +GG+MVWE Sbjct: 267 PLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824| Length = 506 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 365 AAYPSAQIYLGLPASEQKVGYV 300 A +PSA +Y PA +KVG+V Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -3 Query: 303 RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187 RSS P RR GGA GG RG G L+ A ++ L Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 194 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647
>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)| Length = 1075 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -2 Query: 292 RTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATPSNG 173 RT TTAS P W+G T TS ++T T +NG Sbjct: 313 RTPTTASTITTTTEP-----WTGTFTSTSTEMTTVTGTNG 347
>CILA_KLEPN (P45413) Citrate lyase alpha chain (EC 4.1.3.6) (Citrase alpha| chain) (Citrate (pro-3S)-lyase alpha chain) (Citrate CoA-transferase subunit) (EC 2.8.3.10) Length = 508 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -3 Query: 357 SVGADLPRAAGVRAEGRLRSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQLR 184 + GADL GR+ E +L R T GA L HG+ + D + LR Sbjct: 397 AAGADLTIITAPLVRGRIPCVVEKVLTRVTPGASVDVLVTDHGIAVNPARQDLIDNLR 454
>PPID_MOUSE (Q9CR16) 40 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-40) (CYP-40) Length = 369 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +2 Query: 41 YKAHNFTLAILIHCKVSKHMHMHMQYTDGYNKSTR*RSERRRVKPIGWRSCCNLSAC 211 +K+ N+ +AI + KV ++Y D +K+ +++R R++PI N+ AC Sbjct: 233 FKSQNWEMAIKKYAKV-------LRYVDS-SKAVIEKADRSRLQPIALSCVLNIGAC 281
>SP1_HORSE (P81121) Seminal plasma protein HSP-1| Length = 120 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -2 Query: 289 TSTTASYRWCRRRPTMAGSW 230 T T + YRWC T +GSW Sbjct: 49 TRTDSFYRWCSLTGTYSGSW 68
>NFASC_CHICK (O42414) Neurofascin precursor| Length = 1369 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = -2 Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATP---SNGLDPPSLRSSP 143 +QRT + YR+ R T G V + + ATP S L PP+ +P Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTP 1069
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198 HP LY + V+ +GG +VW+ + K TN Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/42 (26%), Positives = 25/42 (59%) Frame = -1 Query: 347 QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 ++++G+PA+ GYV L I+ ++ +++ GV +W+ Sbjct: 239 KLFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFAGVSLWD 279 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,533,317 Number of Sequences: 219361 Number of extensions: 877767 Number of successful extensions: 2928 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2825 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2920 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)