Clone Name | rbaet98e07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_955234.1| Neurospora crassa OR74A hypothetical protein (NCU07062.1) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gacaaactttgatgccacat 89 |||||||||||||||||||| Sbjct: 657 gacaaactttgatgccacat 676
>ref|XM_327347.1| Neurospora crassa OR74A hypothetical protein (NCU07062.1) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gacaaactttgatgccacat 89 |||||||||||||||||||| Sbjct: 657 gacaaactttgatgccacat 676
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 attgcacacactgaaaatga 114 |||||||||||||||||||| Sbjct: 276416 attgcacacactgaaaatga 276397
>dbj|AP008943.1| Oryzias latipes mitochondrial DNA, complete genome, isolate: Toyooka Length = 16437 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 taattctctagttctaatgacact 54 ||||||||| |||||||||||||| Sbjct: 8882 taattctcttgttctaatgacact 8905
>gb|AC096635.2| Homo sapiens chromosome 1 clone RP11-75H16, complete sequence Length = 173256 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 attgcacacactgaaaatga 114 |||||||||||||||||||| Sbjct: 168190 attgcacacactgaaaatga 168209
>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence Length = 222209 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ttattgcacacactgaaaatgaag 116 |||||||| ||||||||||||||| Sbjct: 31330 ttattgcagacactgaaaatgaag 31307
>dbj|AB075013.2| Rattus norvegicus gene, complete cds Length = 11945 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ttattgcacacactgaaaatgaag 116 |||||||| ||||||||||||||| Sbjct: 5316 ttattgcagacactgaaaatgaag 5293
>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence Length = 217949 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ttattgcacacactgaaaatgaag 116 |||||||| ||||||||||||||| Sbjct: 76428 ttattgcagacactgaaaatgaag 76451
>gb|AC018356.26| Homo sapiens 3 BAC RP11-258G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 120846 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 aaactttgatgccacattc 91 ||||||||||||||||||| Sbjct: 77595 aaactttgatgccacattc 77577 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 860,173 Number of Sequences: 3902068 Number of extensions: 860173 Number of successful extensions: 48760 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48743 Number of HSP's gapped (non-prelim): 17 length of query: 116 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 95 effective length of database: 17,151,101,840 effective search space: 1629354674800 effective search space used: 1629354674800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)