ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on ch... 42 0.45
2gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, compl... 42 0.45
3gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 42 0.45
4gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, c... 40 1.8
5gb|BC052945.1| Homo sapiens cDNA clone IMAGE:5268504 40 1.8
6gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chrom... 40 1.8
7ref|XM_944925.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 1.8
8ref|XM_932161.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 1.8
9gb|DP000032.1| Felis catus target 116 genomic scaffold 40 1.8
10gb|AC139491.2| Homo sapiens chromosome 5 clone RP11-826N14, comp... 40 1.8
11gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H2... 40 1.8
12gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 7.0
13gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome... 38 7.0
14gb|BC058605.1| Mus musculus cleavage stimulation factor, 3' pre-... 38 7.0
15ref|NM_177253.1| Mus musculus cleavage stimulation factor, 3' pr... 38 7.0
16emb|Z29560.1|CEK03H1 Caenorhabditis elegans Cosmid K03H1, comple... 38 7.0
17emb|BX296549.11| Zebrafish DNA sequence from clone CH211-264K6 i... 38 7.0
18emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, comple... 38 7.0
19emb|Z29561.2|CER10E12 Caenorhabditis elegans Cosmid R10E12, comp... 38 7.0
20emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosom... 38 7.0
21emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in ... 38 7.0
22emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in... 38 7.0
23emb|AL591674.3| Zebrafish DNA sequence from clone BUSM1-40G1 in ... 38 7.0
24emb|CR759941.1| Rat DNA sequence from clone RP32-551O16 on chrom... 38 7.0
25gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Can... 38 7.0
26gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Canc... 38 7.0
27dbj|AK164375.1| Mus musculus 12 days embryo spinal ganglion cDNA... 38 7.0
28emb|AL844603.5| Mouse DNA sequence from clone RP24-334I20 on chr... 38 7.0
29dbj|AK028899.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 38 7.0
30ref|NM_077427.3| Caenorhabditis elegans T21B6.2 (T21B6.2) mRNA, ... 38 7.0
31ref|NM_001027544.1| Caenorhabditis elegans ALIX (Apoptosis-linke... 38 7.0
32ref|NM_001027542.1| Caenorhabditis elegans ALIX (Apoptosis-linke... 38 7.0
33ref|NM_001027543.1| Caenorhabditis elegans ALIX (Apoptosis-linke... 38 7.0
34ref|NM_066812.4| Caenorhabditis elegans ALIX (Apoptosis-linked g... 38 7.0
35dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
36gb|AC142116.2| Homo sapiens BAC clone RP11-1288H11 from 2, compl... 38 7.0
37gb|AF465753.1| Oncorhynchus mykiss ABCB2 gene, 5' flanking region 38 7.0
38ref|XM_321513.2| Anopheles gambiae str. PEST ENSANGP00000018135 ... 38 7.0
39gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z21... 38 7.0
40emb|CR388138.29| Zebrafish DNA sequence from clone DKEY-255D8 in... 38 7.0
41gb|AF093624.1|AF093624 Mus musculus Nsp-like 1 protein (Nspl1) g... 38 7.0
42emb|CR854915.21| Zebrafish DNA sequence from clone DKEY-4G13 in ... 38 7.0
43gb|U73679.1|CEU73679 Caenorhabditis elegans YNK1-a mRNA, complet... 38 7.0
44emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 38 7.0
45gb|AC156981.13| Mus musculus chromosome 18, clone RP23-145E3, co... 38 7.0
46gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, comp... 38 7.0
47emb|AL591596.5| Zebrafish DNA sequence from clone XX-205M23, com... 38 7.0
48emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, comp... 38 7.0
49emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chr... 38 7.0
50emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chr... 38 7.0
51emb|AL672139.6| Zebrafish DNA sequence from clone XX-198H22, com... 38 7.0 
>emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on chromosome 1q31.1-31.3,
              complete sequence
          Length = 169162

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     atgttccatatgggccctcaa 59
              |||||||||||||||||||||
Sbjct: 137529 atgttccatatgggccctcaa 137549
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>gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, complete sequence
          Length = 170063

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     ctcaattgtaaacatctttga 75
              |||||||||||||||||||||
Sbjct: 100293 ctcaattgtaaacatctttga 100273
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 81    tacaacatcaacgatccgatattag 105
             ||||||||||| |||||||||||||
Sbjct: 68412 tacaacatcaaggatccgatattag 68388
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>gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, complete sequence
          Length = 220334

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   catacatccagagtacacacatac 130
             ||||||| ||||||||||||||||
Sbjct: 92264 catacatacagagtacacacatac 92287
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>gb|BC052945.1| Homo sapiens cDNA clone IMAGE:5268504
          Length = 3651

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ccctcaattgtaaacatctt 72
            ||||||||||||||||||||
Sbjct: 3435 ccctcaattgtaaacatctt 3416
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>gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chromosome 5, complete
              sequence
          Length = 169688

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     ccctcaattgtaaacatctt 72
              ||||||||||||||||||||
Sbjct: 101948 ccctcaattgtaaacatctt 101929
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>ref|XM_944925.1| PREDICTED: Homo sapiens hypothetical protein LOC649241, transcript
            variant 1 (LOC649242), mRNA
          Length = 3631

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ccctcaattgtaaacatctt 72
            ||||||||||||||||||||
Sbjct: 3429 ccctcaattgtaaacatctt 3410
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>ref|XM_932161.1| PREDICTED: Homo sapiens hypothetical protein LOC643200, transcript
            variant 1 (LOC643201), mRNA
          Length = 3631

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ccctcaattgtaaacatctt 72
            ||||||||||||||||||||
Sbjct: 3429 ccctcaattgtaaacatctt 3410
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>gb|DP000032.1| Felis catus target 116 genomic scaffold
          Length = 376810

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaaccatgcatttctcatat 29
              ||||||||||||||||||||
Sbjct: 108334 aaaccatgcatttctcatat 108353
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>gb|AC139491.2| Homo sapiens chromosome 5 clone RP11-826N14, complete sequence
          Length = 186722

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ccctcaattgtaaacatctt 72
             ||||||||||||||||||||
Sbjct: 21773 ccctcaattgtaaacatctt 21754
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>gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H24, complete sequence
          Length = 104325

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ccctcaattgtaaacatctt 72
             ||||||||||||||||||||
Sbjct: 78023 ccctcaattgtaaacatctt 78004
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     aattgtaaacatctttgat 76
              |||||||||||||||||||
Sbjct: 138542 aattgtaaacatctttgat 138524
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>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence
          Length = 177843

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     ggaaaatgaaaaccatgca 19
             |||||||||||||||||||
Sbjct: 46912 ggaaaatgaaaaccatgca 46894
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>gb|BC058605.1| Mus musculus cleavage stimulation factor, 3' pre-RNA, subunit 3,
           mRNA (cDNA clone IMAGE:5376182), complete cds
          Length = 1045

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 10  aaaccatgcatttctcata 28
           |||||||||||||||||||
Sbjct: 827 aaaccatgcatttctcata 809
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>ref|NM_177253.1| Mus musculus cleavage stimulation factor, 3' pre-RNA, subunit 3
           (Cstf3), transcript variant 2, mRNA
          Length = 2580

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 10  aaaccatgcatttctcata 28
           |||||||||||||||||||
Sbjct: 821 aaaccatgcatttctcata 803
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>emb|Z29560.1|CEK03H1 Caenorhabditis elegans Cosmid K03H1, complete sequence
          Length = 34583

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    acatcaacgatccgatatt 103
             |||||||||||||||||||
Sbjct: 34565 acatcaacgatccgatatt 34547
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>emb|BX296549.11| Zebrafish DNA sequence from clone CH211-264K6 in linkage group 8,
              complete sequence
          Length = 147727

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      gaaaatgaaaaccatgcat 20
              |||||||||||||||||||
Sbjct: 139877 gaaaatgaaaaccatgcat 139895
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>emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, complete sequence
          Length = 30716

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    attgtaaacatctttgata 77
             |||||||||||||||||||
Sbjct: 21003 attgtaaacatctttgata 21021
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>emb|Z29561.2|CER10E12 Caenorhabditis elegans Cosmid R10E12, complete sequence
          Length = 30501

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 85   acatcaacgatccgatatt 103
            |||||||||||||||||||
Sbjct: 1048 acatcaacgatccgatatt 1030
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>emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosome, clone 11N17
          Length = 147295

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    acaacatcaacgatccgat 100
             |||||||||||||||||||
Sbjct: 77330 acaacatcaacgatccgat 77348
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>emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in linkage group 2,
             complete sequence
          Length = 172284

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 66099 aaatgaaaaccatgcattt 66117
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>emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in linkage group 8,
             complete sequence
          Length = 266430

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     gaaaatgaaaaccatgcat 20
             |||||||||||||||||||
Sbjct: 13558 gaaaatgaaaaccatgcat 13576
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>emb|AL591674.3| Zebrafish DNA sequence from clone BUSM1-40G1 in linkage group 2
             Contains a novel gene for a protein similar to human
             candidate tumor suppressor p33 ING1 (inhibitor of growth
             1), a putative gene for a novel transcript, 37 TCR-alpha V
             segments (I-1 to I-19, I-22 to I-31, I-33 to I-40) 8 of
             which are pseudogenes,  and a CpG island, complete
             sequence
          Length = 96045

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 62186 aaatgaaaaccatgcattt 62168
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>emb|CR759941.1| Rat DNA sequence from clone RP32-551O16 on chromosome Y, complete
             sequence
          Length = 174940

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    atctttgatagtgtacaac 86
             |||||||||||||||||||
Sbjct: 20990 atctttgatagtgtacaac 20972
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>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 159902

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 9    aaaaccatgcatttctcat 27
            |||||||||||||||||||
Sbjct: 5756 aaaaccatgcatttctcat 5738
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>gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178336

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    aattgtaaacatctttgat 76
             |||||||||||||||||||
Sbjct: 41589 aattgtaaacatctttgat 41571
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>dbj|AK164375.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130077I17
            product:unclassifiable, full insert sequence
          Length = 5253

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 10   aaaccatgcatttctcata 28
            |||||||||||||||||||
Sbjct: 5059 aaaccatgcatttctcata 5041
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>emb|AL844603.5| Mouse DNA sequence from clone RP24-334I20 on chromosome 2, complete
             sequence
          Length = 144391

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    aaaccatgcatttctcata 28
             |||||||||||||||||||
Sbjct: 43542 aaaccatgcatttctcata 43524
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>dbj|AK028899.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732468G05 product:hypothetical protein,
           full insert sequence
          Length = 2580

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 10  aaaccatgcatttctcata 28
           |||||||||||||||||||
Sbjct: 821 aaaccatgcatttctcata 803
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>ref|NM_077427.3| Caenorhabditis elegans T21B6.2 (T21B6.2) mRNA, complete cds
          Length = 1273

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 59  attgtaaacatctttgata 77
           |||||||||||||||||||
Sbjct: 582 attgtaaacatctttgata 564
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>ref|NM_001027544.1| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 1497

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 400 acatcaacgatccgatatt 382
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>ref|NM_001027542.1| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 2778

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 400 acatcaacgatccgatatt 382
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>ref|NM_001027543.1| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 2698

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 400 acatcaacgatccgatatt 382
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>ref|NM_066812.4| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 2758

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 401 acatcaacgatccgatatt 383
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 15       atgcatttctcatatagacattt 37
                ||||||||||||| |||||||||
Sbjct: 13601908 atgcatttctcatttagacattt 13601930
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>gb|AC142116.2| Homo sapiens BAC clone RP11-1288H11 from 2, complete sequence
          Length = 21376

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    atttctcatatagacattt 37
             |||||||||||||||||||
Sbjct: 11747 atttctcatatagacattt 11729
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>gb|AF465753.1| Oncorhynchus mykiss ABCB2 gene, 5' flanking region
          Length = 813

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 32  acatttcatgttccatatg 50
           |||||||||||||||||||
Sbjct: 697 acatttcatgttccatatg 715
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>ref|XM_321513.2| Anopheles gambiae str. PEST ENSANGP00000018135 (ENSANGG00000015646),
            partial mRNA
          Length = 5643

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   acaacatcaacgatccgat 100
            |||||||||||||||||||
Sbjct: 3548 acaacatcaacgatccgat 3566
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>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S
             ribosomal protein S8 (Z214A02.25), and putative casein
             kinase I (Z214A02.27) genes, complete cds
          Length = 158797

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    gatattagtcatacatcca 116
             |||||||||||||||||||
Sbjct: 86847 gatattagtcatacatcca 86865
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>emb|CR388138.29| Zebrafish DNA sequence from clone DKEY-255D8 in linkage group 8, complete
              sequence
          Length = 232320

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      gaaaatgaaaaccatgcat 20
              |||||||||||||||||||
Sbjct: 138279 gaaaatgaaaaccatgcat 138261



 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     gaaaatgaaaaccatgcat 20
             |||||||||||||||||||
Sbjct: 79001 gaaaatgaaaaccatgcat 78983
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>gb|AF093624.1|AF093624 Mus musculus Nsp-like 1 protein (Nspl1) gene, complete cds; tRNA-Sec
             gene, complete sequence; and FosB protein (Fosb) gene,
             complete cds
          Length = 28825

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 122   cacacatactcatgagaac 140
             |||||||||||||||||||
Sbjct: 15582 cacacatactcatgagaac 15600
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>emb|CR854915.21| Zebrafish DNA sequence from clone DKEY-4G13 in linkage group 13, complete
              sequence
          Length = 158798

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 6      atgaaaaccatgcatttctcata 28
              |||||| ||||||||||||||||
Sbjct: 132793 atgaaacccatgcatttctcata 132815
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>gb|U73679.1|CEU73679 Caenorhabditis elegans YNK1-a mRNA, complete cds
          Length = 2770

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 412 acatcaacgatccgatatt 394
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>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10,
              complete sequence
          Length = 133238

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 15     atgcatttctcatatagacattt 37
              ||||||||||||| |||||||||
Sbjct: 128371 atgcatttctcatttagacattt 128393
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>gb|AC156981.13| Mus musculus chromosome 18, clone RP23-145E3, complete sequence
          Length = 210762

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      aaaaccatgcatttctcat 27
              |||||||||||||||||||
Sbjct: 142498 aaaaccatgcatttctcat 142516
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>gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, complete sequence
          Length = 193703

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      aaaatgaaaaccatgcatttctc 25
              |||||||| ||||||||||||||
Sbjct: 182512 aaaatgaataccatgcatttctc 182534
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>emb|AL591596.5| Zebrafish DNA sequence from clone XX-205M23, complete sequence
          Length = 84809

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 4    aaatgaaaaccatgcattt 22
            |||||||||||||||||||
Sbjct: 2495 aaatgaaaaccatgcattt 2513
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>emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, complete sequence
          Length = 110834

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 28120 aaatgaaaaccatgcattt 28138
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>emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chromosome X, complete
              sequence
          Length = 194141

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     gacatttcatgttccatat 49
              |||||||||||||||||||
Sbjct: 177314 gacatttcatgttccatat 177332
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>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete
             sequence
          Length = 190994

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    gatattagtcatacatcca 116
             |||||||||||||||||||
Sbjct: 94364 gatattagtcatacatcca 94346
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>emb|AL672139.6| Zebrafish DNA sequence from clone XX-198H22, complete sequence
          Length = 89160

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 74561 aaatgaaaaccatgcattt 74579


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,513,186
Number of Sequences: 3902068
Number of extensions: 1513186
Number of successful extensions: 109816
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109686
Number of HSP's gapped (non-prelim): 130
length of query: 146
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 125
effective length of database: 17,151,101,840
effective search space: 2143887730000
effective search space used: 2143887730000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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