>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds
          Length = 777

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                 
Query: 234 ttatgaggaatatgtaaaaattcatttatacatagaag 271
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttatgaggaatatgtaaaaattcatttatacatagaag 735

>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 243   atatgtaaaaattcatttata 263
             |||||||||||||||||||||
Sbjct: 41414 atatgtaaaaattcatttata 41394

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 251     aaattcatttatacatagaag 271
               |||||||||||||||||||||
Sbjct: 5987801 aaattcatttatacatagaag 5987781

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 77      cttagtacatgtgtttgtaga 97
               |||||||||||||||||||||
Sbjct: 4805996 cttagtacatgtgtttgtaga 4806016



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 236      atgaggaatatgtaaaaatt 255
                ||||||||||||||||||||
Sbjct: 24723095 atgaggaatatgtaaaaatt 24723114

>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13,
             complete sequence
          Length = 137572

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   aaattcatttatacatagaag 271
             |||||||||||||||||||||
Sbjct: 11198 aaattcatttatacatagaag 11178

>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence
          Length = 140426

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 243   atatgtaaaaattcatttata 263
             |||||||||||||||||||||
Sbjct: 41414 atatgtaaaaattcatttata 41394

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710E05
          Length = 179714

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 77    cttagtacatgtgtttgtaga 97
             |||||||||||||||||||||
Sbjct: 50645 cttagtacatgtgtttgtaga 50665

>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17,
              complete sequence
          Length = 137981

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    aaattcatttatacatagaag 271
              |||||||||||||||||||||
Sbjct: 131038 aaattcatttatacatagaag 131018

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     attatgaggaatatgtaaaa 252
               ||||||||||||||||||||
Sbjct: 1463464 attatgaggaatatgtaaaa 1463483

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     attatgaggaatatgtaaaa 252
               ||||||||||||||||||||
Sbjct: 1439128 attatgaggaatatgtaaaa 1439147

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     attatgaggaatatgtaaaa 252
               ||||||||||||||||||||
Sbjct: 1439074 attatgaggaatatgtaaaa 1439093

>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence
          Length = 222382

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    gagagcatctcgacaaagcc 64
             ||||||||||||||||||||
Sbjct: 13350 gagagcatctcgacaaagcc 13331

>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 248    taaaaattcatttatacatagaag 271
              ||||||||||||||| ||||||||
Sbjct: 218092 taaaaattcatttatccatagaag 218069

>gb|AC124513.3| Mus musculus BAC clone RP23-448C3 from chromosome 19, complete sequence
          Length = 202236

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   taaaaattcatttatacatagaag 271
             ||||||||||||||| ||||||||
Sbjct: 11868 taaaaattcatttatccatagaag 11845

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     attatgaggaatatgtaaaa 252
               ||||||||||||||||||||
Sbjct: 1474081 attatgaggaatatgtaaaa 1474100

>emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chromosome 10 Contains part
             of the gene for alpha-catenin-like protein (MGC26194)
             (VR22), complete sequence
          Length = 163119

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   tatgaggaatatgtaaaaat 254
             ||||||||||||||||||||
Sbjct: 64642 tatgaggaatatgtaaaaat 64661

>emb|AL358115.18| Human DNA sequence from clone RP11-525G13 on chromosome 1 Contains
            the 3' end of the UMPK gene for uridine monophosphate
            kinase and a novel gene, complete sequence
          Length = 99866

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   agagaaaaatgtagccattg 30
            ||||||||||||||||||||
Sbjct: 5928 agagaaaaatgtagccattg 5909

>gb|AC122153.4| Oryctolagus cuniculus clone LB1-9L8, complete sequence
          Length = 216345

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    gaaataagctagtcccaaag 232
              ||||||||||||||||||||
Sbjct: 196698 gaaataagctagtcccaaag 196679

>emb|AL596168.1| Listeria innocua Clip11262 complete genome, segment 6/12
          Length = 333050

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     agaaaaatgtagccattgtg 32
              ||||||||||||||||||||
Sbjct: 292699 agaaaaatgtagccattgtg 292680

>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3,
             complete sequence
          Length = 182196

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 81    gtacatgtgtttgtagagtttctc 104
             |||||||||||||||| |||||||
Sbjct: 50313 gtacatgtgtttgtagggtttctc 50290

>gb|AC084880.12| Homo sapiens 12 BAC RP11-64B16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110001

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   aagagagtgttgctaggagg 148
             ||||||||||||||||||||
Sbjct: 15284 aagagagtgttgctaggagg 15265

>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    gaaataagctagtcccaaag 232
              ||||||||||||||||||||
Sbjct: 437714 gaaataagctagtcccaaag 437695

>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     ttatgaggaatatgtaaaaa 253
               ||||||||||||||||||||
Sbjct: 4009297 ttatgaggaatatgtaaaaa 4009316

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 156     aggcggcgcagcgacgagacggcg 179
               |||||||||||||||| |||||||
Sbjct: 3819765 aggcggcgcagcgacgggacggcg 3819788

>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   atgaggaatatgtaaaaatt 255
             ||||||||||||||||||||
Sbjct: 91672 atgaggaatatgtaaaaatt 91691

>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     ttatgaggaatatgtaaaaa 253
               ||||||||||||||||||||
Sbjct: 3949710 ttatgaggaatatgtaaaaa 3949729

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     attatgaggaatatgtaaaa 252
               ||||||||||||||||||||
Sbjct: 1439005 attatgaggaatatgtaaaa 1439024

>dbj|AP004505.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT10E18, TM0035,
             complete sequence
          Length = 106041

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tgtgttcttgagagaagaag 131
             ||||||||||||||||||||
Sbjct: 57634 tgtgttcttgagagaagaag 57615

>emb|AL672067.5| Mouse DNA sequence from clone RP23-5P1 on chromosome X, complete sequence
          Length = 225196

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    taagctagtcccaaagatta 236
              ||||||||||||||||||||
Sbjct: 122400 taagctagtcccaaagatta 122381


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,493,139
Number of Sequences: 3902068
Number of extensions: 3493139
Number of successful extensions: 77789
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77447
Number of HSP's gapped (non-prelim): 342
length of query: 271
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 249
effective length of database: 17,147,199,772
effective search space: 4269652743228
effective search space used: 4269652743228
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)