ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome... 98 3e-17
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
3gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 98 3e-17
4gb|AY105207.1| Zea mays PCO125387 mRNA sequence 64 4e-07
5ref|XM_469744.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
6gb|AY644646.1| Oryza sativa (indica cultivar-group) putative qui... 52 0.002
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
8gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 52 0.002
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10dbj|AK110695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
11ref|XM_960537.1| Neurospora crassa OR74A hypothetical protein (N... 48 0.024
12ref|XM_330135.1| Neurospora crassa OR74A hypothetical protein (N... 48 0.024
13emb|BX842625.1| Neurospora crassa DNA linkage group I BAC clone ... 48 0.024
14ref|XM_520205.1| PREDICTED: Pan troglodytes kinesin family membe... 44 0.37
15gb|BC010626.1| Homo sapiens kinesin family member 12, mRNA (cDNA... 44 0.37
16ref|NM_138424.1| Homo sapiens kinesin family member 12 (KIF12), ... 44 0.37
17emb|CR925737.7| Zebrafish DNA sequence from clone DKEY-263O8 in ... 44 0.37
18gb|BC036824.1| Homo sapiens kinesin family member 12, mRNA (cDNA... 44 0.37
19gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, comple... 44 0.37
20emb|AL137850.12| Human DNA sequence from clone RP11-56P10 on chr... 44 0.37
21emb|CR617868.1| full-length cDNA clone CS0DM002YC04 of Fetal liv... 44 0.37
22gb|AC092212.32| Trypanosoma brucei chromosome 8 clone RPCI93-10J... 42 1.5
23gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 42 1.5
24ref|XM_820118.1| Trypanosoma brucei TREU927 clone RPCI93-10J17 f... 42 1.5
25ref|XM_820117.1| Trypanosoma brucei TREU927 clone RPCI93-10J17 f... 42 1.5
26ref|XM_820115.1| Trypanosoma brucei TREU927 clone RPCI93-10J17 f... 42 1.5
27gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, com... 42 1.5
28ref|XM_647612.1| Entamoeba histolytica HM-1:IMSS protein kinase ... 42 1.5
29emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on ch... 42 1.5
30gb|AC026307.16|AC026307 Homo sapiens 12 BAC RP11-753N8 (Roswell ... 42 1.5
31gb|AC154019.3| Mus musculus 6 BAC RP24-374A6 (Roswell Park Cance... 42 1.5
32emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on ch... 42 1.5
33gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.8
34gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, comp... 40 5.8
35ref|XM_572894.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.8
36ref|XM_572895.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.8
37emb|AL031669.28|HS661I20 Human DNA sequence from clone RP4-661I2... 40 5.8
38emb|AL031768.9|HS136B1 Human DNA sequence from clone RP1-136B1 o... 40 5.8
39gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, comp... 40 5.8
40emb|BX323089.13| Zebrafish DNA sequence from clone DKEYP-10D2 in... 40 5.8
41gb|AC131068.11| Mus musculus chromosome 15, clone RP23-383I12, c... 40 5.8
42gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, comp... 40 5.8
43gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence 40 5.8
44gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, comp... 40 5.8
45gb|AC008514.8| Homo sapiens chromosome 5 clone CTC-455F18, compl... 40 5.8
46gb|AC142264.6| Mus musculus BAC clone RP24-394K17 from chromosom... 40 5.8
47gb|AC018753.5|AC018753 Homo sapiens chromosome 5 clone CTC-376I2... 40 5.8
48dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49gb|AC108201.2| Homo sapiens BAC clone RP11-18M21 from 4, complet... 40 5.8
50emb|BX005443.17| Zebrafish DNA sequence from clone CH211-167L23 ... 40 5.8
51gb|AE004845.1| Pseudomonas aeruginosa PAO1, section 406 of 529 o... 40 5.8
52dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
53emb|AL929390.14| Mouse DNA sequence from clone RP23-107J3 on chr... 40 5.8
54gb|BC079133.1| Rattus norvegicus aldo-keto reductase family 1, m... 40 5.8
55emb|AL935211.7| Zebrafish DNA sequence from clone CH211-227L1, c... 40 5.8
56ref|NM_001013084.1| Rattus norvegicus aldo-keto reductase family... 40 5.8 
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19,
              complete sequence
          Length = 153276

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                          
Query: 324    agcttcttcacgaaggcggccatgtacttgccctggtgctcggcgagcgcaagttccgcc 383
              ||||||||||| | || ||||||||||||||||||||||||||| || || || |||| |
Sbjct: 148378 agcttcttcactatggaggccatgtacttgccctggtgctcggctagggcgagctccgtc 148319

                                           
Query: 384    tcgctgggctgcctgctaccatcaccagc 412
              ||||||||||| ||||| |||||||||||
Sbjct: 148318 tcgctgggctgtctgctgccatcaccagc 148290
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                            
Query: 324      agcttcttcacgaaggcggccatgtacttgccctggtgctcggcgagcgcaagttccgcc 383
                ||||||||||| | || ||||||||||||||||||||||||||| || || || |||| |
Sbjct: 15089759 agcttcttcactatggaggccatgtacttgccctggtgctcggctagggcgagctccgtc 15089700

                                             
Query: 384      tcgctgggctgcctgctaccatcaccagc 412
                ||||||||||| ||||| |||||||||||
Sbjct: 15089699 tcgctgggctgtctgctgccatcaccagc 15089671
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                            
Query: 324      agcttcttcacgaaggcggccatgtacttgccctggtgctcggcgagcgcaagttccgcc 383
                ||||||||||| | || ||||||||||||||||||||||||||| || || || |||| |
Sbjct: 15098000 agcttcttcactatggaggccatgtacttgccctggtgctcggctagggcgagctccgtc 15097941

                                             
Query: 384      tcgctgggctgcctgctaccatcaccagc 412
                ||||||||||| ||||| |||||||||||
Sbjct: 15097940 tcgctgggctgtctgctgccatcaccagc 15097912
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>gb|AY105207.1| Zea mays PCO125387 mRNA sequence
          Length = 603

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                       
Query: 324 agcttcttcacgaaggcggccatgtacttgccctggtgctcggcgagcgcaagttccgcc 383
           ||||| ||||| | || |||||||||||||||||||||||| || || || ||||| | |
Sbjct: 485 agctttttcactatggaggccatgtacttgccctggtgctctgcaagggcgagttcagtc 426

                                           
Query: 384 tcgctgggctgcctgctaccatcaccagcaaa 415
           || ||||| || ||||| ||||| ||||||||
Sbjct: 425 tcactgggttgtctgctgccatcgccagcaaa 394
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>ref|XM_469744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 759

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 341 ggccatgtacttgccctggtgctcggcgag 370
           ||||||||||||||| ||||||||||||||
Sbjct: 723 ggccatgtacttgccgtggtgctcggcgag 694
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>gb|AY644646.1| Oryza sativa (indica cultivar-group) putative quinone reductase
           (QR) mRNA, complete cds
          Length = 963

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 341 ggccatgtacttgccctggtgctcggcgag 370
           ||||||||||||||| ||||||||||||||
Sbjct: 728 ggccatgtacttgccgtggtgctcggcgag 699
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 341      ggccatgtacttgccctggtgctcggcgag 370
                ||||||||||||||| ||||||||||||||
Sbjct: 30515422 ggccatgtacttgccgtggtgctcggcgag 30515451
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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
             sequence
          Length = 139872

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 341   ggccatgtacttgccctggtgctcggcgag 370
             ||||||||||||||| ||||||||||||||
Sbjct: 46995 ggccatgtacttgccgtggtgctcggcgag 47024
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 341      ggccatgtacttgccctggtgctcggcgag 370
                ||||||||||||||| ||||||||||||||
Sbjct: 30606844 ggccatgtacttgccgtggtgctcggcgag 30606873
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>dbj|AK110695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-A09, full
           insert sequence
          Length = 952

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 341 ggccatgtacttgccctggtgctcggcgag 370
           ||||||||||||||| ||||||||||||||
Sbjct: 717 ggccatgtacttgccgtggtgctcggcgag 688
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>ref|XM_960537.1| Neurospora crassa OR74A hypothetical protein (NCU02948.1) partial
           mRNA
          Length = 735

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 383 ctcgctgggctgcctgctaccatcacca 410
           |||||||||||||||||| |||||||||
Sbjct: 546 ctcgctgggctgcctgctgccatcacca 519
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>ref|XM_330135.1| Neurospora crassa OR74A hypothetical protein (NCU02948.1) partial
           mRNA
          Length = 735

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 383 ctcgctgggctgcctgctaccatcacca 410
           |||||||||||||||||| |||||||||
Sbjct: 546 ctcgctgggctgcctgctgccatcacca 519
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>emb|BX842625.1| Neurospora crassa DNA linkage group I BAC clone B16D18
          Length = 76004

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 383  ctcgctgggctgcctgctaccatcacca 410
            |||||||||||||||||| |||||||||
Sbjct: 2920 ctcgctgggctgcctgctgccatcacca 2947
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>ref|XM_520205.1| PREDICTED: Pan troglodytes kinesin family member 12 (LOC464678), mRNA
          Length = 2129

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 392  ctgcctgctaccatcaccagca 413
            ||||||||||||||||||||||
Sbjct: 1367 ctgcctgctaccatcaccagca 1388
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>gb|BC010626.1| Homo sapiens kinesin family member 12, mRNA (cDNA clone MGC:17687
            IMAGE:3865868), complete cds
          Length = 2024

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 392  ctgcctgctaccatcaccagca 413
            ||||||||||||||||||||||
Sbjct: 1236 ctgcctgctaccatcaccagca 1257
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>ref|NM_138424.1| Homo sapiens kinesin family member 12 (KIF12), mRNA
          Length = 2024

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 392  ctgcctgctaccatcaccagca 413
            ||||||||||||||||||||||
Sbjct: 1236 ctgcctgctaccatcaccagca 1257
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>emb|CR925737.7| Zebrafish DNA sequence from clone DKEY-263O8 in linkage group 10,
              complete sequence
          Length = 176107

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 34     ctttacatcaaacagttcattc 55
              ||||||||||||||||||||||
Sbjct: 129360 ctttacatcaaacagttcattc 129381
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>gb|BC036824.1| Homo sapiens kinesin family member 12, mRNA (cDNA clone
            IMAGE:5189351), with apparent retained intron
          Length = 2700

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 392  ctgcctgctaccatcaccagca 413
            ||||||||||||||||||||||
Sbjct: 1643 ctgcctgctaccatcaccagca 1664
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>gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, complete sequence
          Length = 209411

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 99     tattttacaaatggacaataaa 120
              ||||||||||||||||||||||
Sbjct: 139155 tattttacaaatggacaataaa 139134
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>emb|AL137850.12| Human DNA sequence from clone RP11-56P10 on chromosome 9q31.3-33.3
             Contains the 3' end of the gene for a novel C2H2 type zinc
             finger protein, the AMBP gene for
             alpha-1-microglobulin/bikunin precursor, the gene for a
             novel protein similar to mouse kinesin 12 (LOC113220) and
             two CpG islands, complete sequence
          Length = 125842

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 392   ctgcctgctaccatcaccagca 413
             ||||||||||||||||||||||
Sbjct: 89636 ctgcctgctaccatcaccagca 89615
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>emb|CR617868.1| full-length cDNA clone CS0DM002YC04 of Fetal liver of Homo sapiens
            (human)
          Length = 2774

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 392  ctgcctgctaccatcaccagca 413
            ||||||||||||||||||||||
Sbjct: 1539 ctgcctgctaccatcaccagca 1560
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>gb|AC092212.32| Trypanosoma brucei chromosome 8 clone RPCI93-10J17, complete sequence
          Length = 168741

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    agaggaaacaatggatgctcg 260
              |||||||||||||||||||||
Sbjct: 141545 agaggaaacaatggatgctcg 141565



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    agaggaaacaatggatgctcg 260
              |||||||||||||||||||||
Sbjct: 138181 agaggaaacaatggatgctcg 138201



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    agaggaaacaatggatgctcg 260
              |||||||||||||||||||||
Sbjct: 133805 agaggaaacaatggatgctcg 133825
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 240     agaggaaacaatggatgctcg 260
               |||||||||||||||||||||
Sbjct: 1095019 agaggaaacaatggatgctcg 1094999



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 240     agaggaaacaatggatgctcg 260
               |||||||||||||||||||||
Sbjct: 1090643 agaggaaacaatggatgctcg 1090623



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 240     agaggaaacaatggatgctcg 260
               |||||||||||||||||||||
Sbjct: 1087279 agaggaaacaatggatgctcg 1087259
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>ref|XM_820118.1| Trypanosoma brucei TREU927 clone RPCI93-10J17 folate transporter
           (Tb927.8.3620) partial mRNA
          Length = 1899

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 agaggaaacaatggatgctcg 260
           |||||||||||||||||||||
Sbjct: 96  agaggaaacaatggatgctcg 116
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>ref|XM_820117.1| Trypanosoma brucei TREU927 clone RPCI93-10J17 folate transporter
           (Tb927.8.3630) partial mRNA
          Length = 1899

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 agaggaaacaatggatgctcg 260
           |||||||||||||||||||||
Sbjct: 96  agaggaaacaatggatgctcg 116
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>ref|XM_820115.1| Trypanosoma brucei TREU927 clone RPCI93-10J17 folate transporter
           (Tb927.8.3650) partial mRNA
          Length = 1899

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 agaggaaacaatggatgctcg 260
           |||||||||||||||||||||
Sbjct: 96  agaggaaacaatggatgctcg 116
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>gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, complete sequence
          Length = 252723

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     tccagaagaactcacaggttc 86
              |||||||||||||||||||||
Sbjct: 229180 tccagaagaactcacaggttc 229160
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>ref|XM_647612.1| Entamoeba histolytica HM-1:IMSS protein kinase (108.t00009)  partial
            mRNA
          Length = 5970

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 107  aaatggacaataaacatcatt 127
            |||||||||||||||||||||
Sbjct: 1233 aaatggacaataaacatcatt 1213
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>emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on chromosome 10 Contains
            the 5' end of the gene for KIAA0940 protein, a succinate
            dehydrogenase complex pseudogene, the 5' end of a novel
            gene (FLJ20445), a nucleolar protein family A member 2
            pseudogene 1 (NOLA2P1) and a CpG island, complete
            sequence
          Length = 213648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 97   cttattttacaaatggacaat 117
            |||||||||||||||||||||
Sbjct: 8550 cttattttacaaatggacaat 8530
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>gb|AC026307.16|AC026307 Homo sapiens 12 BAC RP11-753N8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166357

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 120   acatcatttatgtcaacaaatgtacaaagaaac 152
             ||||||||||||||| ||| |||||| ||||||
Sbjct: 98174 acatcatttatgtcagcaactgtacatagaaac 98142
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>gb|AC154019.3| Mus musculus 6 BAC RP24-374A6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 169229

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     tccagaagaactcacaggttc 86
              |||||||||||||||||||||
Sbjct: 143046 tccagaagaactcacaggttc 143066
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>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete
            sequence
          Length = 190641

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 49   ttcattccacacagcaatcca 69
            |||||||||||||||||||||
Sbjct: 3257 ttcattccacacagcaatcca 3237
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>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    cgaagctgaagaggaaacaatgga 254
              ||||||||||||||| ||||||||
Sbjct: 988195 cgaagctgaagaggatacaatgga 988218
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>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence
          Length = 215696

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gaagctgaagaggaaacaat 251
              ||||||||||||||||||||
Sbjct: 215215 gaagctgaagaggaaacaat 215196
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>ref|XM_572894.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNI03670) partial mRNA
          Length = 2109

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 231 cgaagctgaagaggaaacaatgga 254
           ||||||||||||||| ||||||||
Sbjct: 903 cgaagctgaagaggatacaatgga 926
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>ref|XM_572895.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNI03670) partial mRNA
          Length = 2205

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 231 cgaagctgaagaggaaacaatgga 254
           ||||||||||||||| ||||||||
Sbjct: 903 cgaagctgaagaggatacaatgga 926
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>emb|AL031669.28|HS661I20 Human DNA sequence from clone RP4-661I20 on chromosome 20q11.23-12
             Contains the RPL12L2 gene for ribosomal protein L12-like 2
             pseudogene, the 5' end of the CHD6 gene for chromodomain
             helicase DNA binding protein 6 and two CpG islands,
             complete sequence
          Length = 94224

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    atgaatctttacatcaaaca 47
             ||||||||||||||||||||
Sbjct: 25924 atgaatctttacatcaaaca 25905
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>emb|AL031768.9|HS136B1 Human DNA sequence from clone RP1-136B1 on chromosome 6p24.1-25.3,
             complete sequence
          Length = 96614

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   aaacatcatttatgtcaaca 137
             ||||||||||||||||||||
Sbjct: 46436 aaacatcatttatgtcaaca 46417
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>gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, complete sequence
          Length = 175464

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   aagatgtgcacatgtaggga 217
             ||||||||||||||||||||
Sbjct: 65147 aagatgtgcacatgtaggga 65166
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>emb|BX323089.13| Zebrafish DNA sequence from clone DKEYP-10D2 in linkage group 21,
             complete sequence
          Length = 87960

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   tcaacaaatgtacaaagaaa 151
             ||||||||||||||||||||
Sbjct: 47696 tcaacaaatgtacaaagaaa 47715



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   tcaacaaatgtacaaagaaa 151
             ||||||||||||||||||||
Sbjct: 34435 tcaacaaatgtacaaagaaa 34454
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>gb|AC131068.11| Mus musculus chromosome 15, clone RP23-383I12, complete sequence
          Length = 183651

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ttacaaatggacaataaaca 122
             ||||||||||||||||||||
Sbjct: 49911 ttacaaatggacaataaaca 49930
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>gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, complete sequence
          Length = 102001

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    cagcaatccagaagaactcacagg 83
             |||||| |||||||||||||||||
Sbjct: 53113 cagcaagccagaagaactcacagg 53136
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>gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence
          Length = 177756

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tttatgtcaacaaatgtaca 145
             ||||||||||||||||||||
Sbjct: 61677 tttatgtcaacaaatgtaca 61696
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>gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, complete sequence
          Length = 208660

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 60     cagcaatccagaagaactcacagg 83
              |||||| |||||||||||||||||
Sbjct: 170228 cagcaagccagaagaactcacagg 170251
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>gb|AC008514.8| Homo sapiens chromosome 5 clone CTC-455F18, complete sequence
          Length = 172525

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 218   caataggaacaggcgaagctgaag 241
             |||||||||||||| |||||||||
Sbjct: 13204 caataggaacaggcaaagctgaag 13227
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>gb|AC142264.6| Mus musculus BAC clone RP24-394K17 from chromosome 6, complete sequence
          Length = 162570

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    gaagctgaagaggaaacaat 251
              ||||||||||||||||||||
Sbjct: 127509 gaagctgaagaggaaacaat 127528
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>gb|AC018753.5|AC018753 Homo sapiens chromosome 5 clone CTC-376I20, complete sequence
          Length = 81971

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 218   caataggaacaggcgaagctgaag 241
             |||||||||||||| |||||||||
Sbjct: 76274 caataggaacaggcaaagctgaag 76297
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 134     aacaaatgtacaaagaaacc 153
               ||||||||||||||||||||
Sbjct: 4852223 aacaaatgtacaaagaaacc 4852242
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>gb|AC108201.2| Homo sapiens BAC clone RP11-18M21 from 4, complete sequence
          Length = 176099

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    tacaaatggacaataaacat 123
              ||||||||||||||||||||
Sbjct: 137317 tacaaatggacaataaacat 137298
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>emb|BX005443.17| Zebrafish DNA sequence from clone CH211-167L23 in linkage group 17,
             complete sequence
          Length = 132502

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    gattgaaatgtatgaatctttaca 40
             ||||||||||||| ||||||||||
Sbjct: 64674 gattgaaatgtattaatctttaca 64697
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>gb|AE004845.1| Pseudomonas aeruginosa PAO1, section 406 of 529 of the complete
           genome
          Length = 11040

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 ccctggtgctcggcgagcgc 373
           ||||||||||||||||||||
Sbjct: 211 ccctggtgctcggcgagcgc 192
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>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1073_F05
          Length = 124252

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aacaaatgtacaaagaaacc 153
             ||||||||||||||||||||
Sbjct: 94382 aacaaatgtacaaagaaacc 94401
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>emb|AL929390.14| Mouse DNA sequence from clone RP23-107J3 on chromosome 4, complete
              sequence
          Length = 146977

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    aggcggccatgtacttgccc 356
              ||||||||||||||||||||
Sbjct: 119382 aggcggccatgtacttgccc 119363
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>gb|BC079133.1| Rattus norvegicus aldo-keto reductase family 1, member B10 (aldose
           reductase), mRNA (cDNA clone MGC:94143 IMAGE:7127413),
           complete cds
          Length = 1446

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 cttcacgaaggcggccatgt 348
           ||||||||||||||||||||
Sbjct: 191 cttcacgaaggcggccatgt 172
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>emb|AL935211.7| Zebrafish DNA sequence from clone CH211-227L1, complete sequence
          Length = 152485

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    tcaacaaatgtacaaagaaa 151
              ||||||||||||||||||||
Sbjct: 127230 tcaacaaatgtacaaagaaa 127249
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>ref|NM_001013084.1| Rattus norvegicus aldo-keto reductase family 1, member B10 (aldose
           reductase) (Akr1b10), mRNA
          Length = 1446

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 cttcacgaaggcggccatgt 348
           ||||||||||||||||||||
Sbjct: 191 cttcacgaaggcggccatgt 172


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,227,831
Number of Sequences: 3902068
Number of extensions: 4227831
Number of successful extensions: 85876
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85667
Number of HSP's gapped (non-prelim): 209
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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