ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 438 e-120
2gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 438 e-120
3gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 438 e-120
4gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 438 e-120
5emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 430 e-117
6emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 343 2e-91
7emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 343 2e-91
8gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 337 1e-89
9emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 327 1e-86
10emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 295 5e-77
11gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 281 8e-73
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 131 2e-27
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 80 6e-12
14gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete seq... 42 1.2
15gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, comple... 42 1.2
16gb|AC004927.2| Homo sapiens PAC clone RP5-910I17 from 7, complet... 42 1.2
17gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromo... 42 1.2
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
19dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
20gb|DQ186202.1| Thalassiosira pseudonana mitochondrion, complete ... 40 4.9
21gb|AC115728.11| Mus musculus chromosome 5, clone RP23-31J24, com... 40 4.9
22emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chr... 40 4.9
23gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3... 40 4.9
24gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome... 40 4.9
25gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small he... 40 4.9
26gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small he... 40 4.9
27gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P1... 40 4.9
28gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, co... 40 4.9
29gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complet... 40 4.9
30gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338)... 40 4.9
31gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3... 40 4.9 
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  438 bits (221), Expect = e-120
 Identities = 226/228 (99%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 397

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 396 aagaaggcatgattaggcttcaagagactgaatgacttcaccatcattacagaaacgggc 337

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 277

                                                           
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtactcagt 365
           |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 276 catgttgtcacagacggaagtcctgcatccaattgtgcagtactcagt 229



 Score =  117 bits (59), Expect = 3e-23
 Identities = 59/59 (100%)
 Strand = Plus / Minus

                                                                      
Query: 46  aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataact 104
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataact 486



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 116 acagaaaatgacaaaacgaccttgg 140
           |||||||||||||||||||||||||
Sbjct: 438 acagaaaatgacaaaacgaccttgg 414



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 acttcaccatcattacagaaa 122
           |||||||||||||||||||||
Sbjct: 362 acttcaccatcattacagaaa 342
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>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  438 bits (221), Expect = e-120
 Identities = 226/228 (99%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 470

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 410

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 350

                                                           
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtactcagt 365
           |||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 349 catgttgtcacagacggaagtccggcatccaattgtgcagtactcagt 302



 Score =  174 bits (88), Expect = 1e-40
 Identities = 97/100 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   cataatatatccatggaacttttatattaagccaagggtataaatagattcatcgtggcg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 658 cataatatatccatggaacttttatattaagccaagggtataaatagattcatcgtgggt 599

                                                   
Query: 65  actcttattggaacgagggaaaaaacagaaatacataact 104
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tctcttattggaacgagggaaaaaacagaaatacataact 559



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 116 acagaaaatgacaaaacgaccttgg 140
           |||||||||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttgg 487



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 acttcaccatcattacagaaa 122
           |||||||||||||||||||||
Sbjct: 435 acttcaccatcattacagaaa 415
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>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  438 bits (221), Expect = e-120
 Identities = 226/228 (99%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 470

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 410

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 350

                                                           
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtactcagt 365
           |||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 349 catgttgtcacagacggaagtccggcatccaattgtgcagtactcagt 302



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                  
Query: 66  ctcttattggaacgagggaaaaaacagaaatacataact 104
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataact 559



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 116 acagaaaatgacaaaacgaccttgg 140
           |||||||||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttgg 487



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 acttcaccatcattacagaaa 122
           |||||||||||||||||||||
Sbjct: 435 acttcaccatcattacagaaa 415
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>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  438 bits (221), Expect = e-120
 Identities = 226/228 (99%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 470

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 410

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 350

                                                           
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtactcagt 365
           |||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 349 catgttgtcacagacggaagtccggcatccaattgtgcagtactcagt 302



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 116 acagaaaatgacaaaacgaccttgg 140
           |||||||||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttgg 487



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 acttcaccatcattacagaaa 122
           |||||||||||||||||||||
Sbjct: 435 acttcaccatcattacagaaa 415
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>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  430 bits (217), Expect = e-117
 Identities = 225/228 (98%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 370 tggtatcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgccc 311

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 251

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 191

                                                           
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtactcagt 365
           || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 190 caggttgtcacagacggaagtcctgcatccaattgtgcagtactcagt 143



 Score =  167 bits (84), Expect = 3e-38
 Identities = 90/92 (97%)
 Strand = Plus / Minus

                                                                       
Query: 13  atccatggaacttttatattaagccaagggtataaatagattcatcgtggcgactcttat 72
           |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 491 atccatggaacttttatattaagccaagggcataaatagattcatcgtggtgactcttat 432

                                           
Query: 73  tggaacgagggaaaaaacagaaatacataact 104
           ||||||||||||||||||||||||||||||||
Sbjct: 431 tggaacgagggaaaaaacagaaatacataact 400



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 116 acagaaaatgacaaaacgaccttgg 140
           ||||||||||| |||||||||||||
Sbjct: 352 acagaaaatgaaaaaacgaccttgg 328



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 acttcaccatcattacagaaa 122
           |||||||||||||||||||||
Sbjct: 276 acttcaccatcattacagaaa 256
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>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  343 bits (173), Expect = 2e-91
 Identities = 211/224 (94%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||| || || | |||||||||| |||||| |||||||||||||||||| |
Sbjct: 504 tggtatcaagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcac 445

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 aagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggc 385

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtc 325

                                                       
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtact 361
           |||||||||||| || ||| ||||||||||||| ||||||||||
Sbjct: 324 catgttgtcacagacagaattcctgcatccaatggtgcagtact 281



 Score =  159 bits (80), Expect = 8e-36
 Identities = 86/88 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcacataatatatccatggaacttttatattaagccaagggtataaatagattcatcgt 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 637 atcacataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgt 578

                                       
Query: 61  ggcgactcttattggaacgagggaaaaa 88
           |||||||||||||||||| |||||||||
Sbjct: 577 ggcgactcttattggaacaagggaaaaa 550
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>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  343 bits (173), Expect = 2e-91
 Identities = 211/224 (94%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||| || || | |||||||||| ||||||||||||||||||||||||| |
Sbjct: 511 tggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcac 452

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 451 aagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggc 392

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 391 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtc 332

                                                       
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtact 361
           |||||||||||| || ||| ||||||||||||| ||||||||||
Sbjct: 331 catgttgtcacagacagaattcctgcatccaatggtgcagtact 288



 Score =  155 bits (78), Expect = 1e-34
 Identities = 97/102 (95%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcacataatatatccatggaacttttatattaagccaagggtataaatagattcatcgt 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 644 atcacataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgt 585

                                                     
Query: 61  ggcgactcttattggaacgagggaaaaaacagaaatacataa 102
           |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 584 ggcgacccttattggaacaaggg-aaaaacagaaatgcataa 544
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>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  337 bits (170), Expect = 1e-89
 Identities = 173/174 (99%)
 Strand = Plus / Minus

                                                                        
Query: 138  tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 2168

                                                                        
Query: 198  aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2167 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 2108

                                                                  
Query: 258  acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaac 311
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2107 acatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054



 Score =  103 bits (52), Expect = 4e-19
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                   
Query: 311  cattgtccatgttgtcacanacggaagtcctgcatccaattgtgcagtactcagt 365
            ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagt 1909



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 116  acagaaaatgacaaaacgaccttgg 140
            |||||||||||||||||||||||||
Sbjct: 2209 acagaaaatgacaaaacgaccttgg 2185



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 102  acttcaccatcattacagaaa 122
            |||||||||||||||||||||
Sbjct: 2133 acttcaccatcattacagaaa 2113
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>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  327 bits (165), Expect = 1e-86
 Identities = 209/224 (93%)
 Strand = Plus / Minus

                                                                       
Query: 138 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
           ||||||||||||| || || | |||||||||| ||||||||||||||||||||||||| |
Sbjct: 331 tggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcac 272

                                                                       
Query: 198 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
           ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 271 aagaaggcatgattaggattcaacagactgaatgactgcaccatcattacaaaaacgggc 212

                                                                       
Query: 258 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 317
           |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 211 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtc 152

                                                       
Query: 318 catgttgtcacanacggaagtcctgcatccaattgtgcagtact 361
           |||||||||||| || ||| ||||||||||||| ||||||||||
Sbjct: 151 catgttgtcacagacagaattcctgcatccaatggtgcagtact 108



 Score =  119 bits (60), Expect = 7e-24
 Identities = 86/92 (93%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                       
Query: 11  atatccatggaacttttatattaagccaagggtataaatagattcatcgtggcgactctt 70
           |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 453 atatccatggaacttt-atattaagccaagggtacaaatagattcatcgtggcgaccctt 395

                                           
Query: 71  attggaacgagggaaaaaacagaaatacataa 102
           |||||||| |||| |||||||||||| |||||
Sbjct: 394 attggaacaaggg-aaaaacagaaatgcataa 364
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>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  295 bits (149), Expect = 5e-77
 Identities = 154/156 (98%)
 Strand = Plus / Minus

                                                                       
Query: 210 ttaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgct 269
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355

                                                                       
Query: 270 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295

                                               
Query: 330 nacggaagtcctgcatccaattgtgcagtactcagt 365
            |||||||||||||||||||||||||||||||||||
Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagt 259
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>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  281 bits (142), Expect = 8e-73
 Identities = 166/174 (95%)
 Strand = Plus / Minus

                                                                        
Query: 138  tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 197
            ||||||||||||| || || | |||||||||| ||||||||||||||||||||||||| |
Sbjct: 2204 tggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcac 2145

                                                                        
Query: 198  aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 257
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2144 aagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggc 2085

                                                                  
Query: 258  acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaac 311
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2084 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031



 Score =  151 bits (76), Expect = 2e-33
 Identities = 85/88 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    atcacataatatatccatggaacttttatattaagccaagggtataaatagattcatcgt 60
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2337 atcacataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgt 2278

                                        
Query: 61   ggcgactcttattggaacgagggaaaaa 88
            |||||||||| ||||||| |||||||||
Sbjct: 2277 ggcgactcttgttggaacaagggaaaaa 2250



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 311  cattgtccatgttgtcacanacggaagtcctgcatccaattgtgcagtact 361
            ||||||||||||||||||| || ||| || |||||||||| ||||||||||
Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtact 1887
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>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  131 bits (66), Expect = 2e-27
 Identities = 161/193 (83%)
 Strand = Plus / Minus

                                                                       
Query: 173 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 232
           ||||| ||||| ||||||||||| |||||  ||||||||| ||||  | |||  ||||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437

                                                                       
Query: 233 cttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 292
           |  |||| |  |||||||||||  ||||| | ||| ||||||||  |||||||| |||||
Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377

                                                                       
Query: 293 tctcttggccacgggaaacattgtccatgttgtcacanacggaagtcctgcatccaattg 352
           ||||||||||| |   ||||||||||||||||||||| ||||||||| ||||||| || |
Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317

                        
Query: 353 tgcagtactcagt 365
           |||||||||||||
Sbjct: 316 tgcagtactcagt 304
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>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 118/144 (81%)
 Strand = Plus / Minus

                                                                       
Query: 162 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 221
           |||| |||||||||| ||||||||||||| | || | |||  ||||||||||||  | ||
Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499

                                                                       
Query: 222 agactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 281
           |||  || ||||  |||| |  |||||||||||| ||||||||||| |||||| |  |||
Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439

                                   
Query: 282 gtcgaatttcatctcttggccacg 305
           |||||  |||||||||||||||||
Sbjct: 438 gtcgatgttcatctcttggccacg 415



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 319 atgttgtcacanacggaagtcctgcatccaattgtgcagtactcag 364
           ||||||||||| ||||||||| |||||||||| |||||||||||||
Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcag 341
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>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence
          Length = 58609

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 84   aaaaaacagaaatacataact 104
            |||||||||||||||||||||
Sbjct: 8230 aaaaaacagaaatacataact 8210
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>gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, complete sequence
          Length = 180081

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      tcacataatatatccatggaa 22
              |||||||||||||||||||||
Sbjct: 155539 tcacataatatatccatggaa 155559
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>gb|AC004927.2| Homo sapiens PAC clone RP5-910I17 from 7, complete sequence
          Length = 80105

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   ccatcattacagaaaatgaca 128
             |||||||||||||||||||||
Sbjct: 54815 ccatcattacagaaaatgaca 54835
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>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete
            sequence
          Length = 180569

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  ccatcattacagaaaatgaca 128
            |||||||||||||||||||||
Sbjct: 5632 ccatcattacagaaaatgaca 5612
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 144     caagattgttgaacagaaaat 164
               |||||||||||||||||||||
Sbjct: 6740764 caagattgttgaacagaaaat 6740784
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>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1131G07
          Length = 133992

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   caagattgttgaacagaaaat 164
             |||||||||||||||||||||
Sbjct: 61817 caagattgttgaacagaaaat 61837
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>gb|DQ186202.1| Thalassiosira pseudonana mitochondrion, complete genome
          Length = 43827

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tatccatggaacttttatat 31
             ||||||||||||||||||||
Sbjct: 19085 tatccatggaacttttatat 19104
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>gb|AC115728.11| Mus musculus chromosome 5, clone RP23-31J24, complete sequence
          Length = 211351

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    atcattacagaaaatgacaa 129
              ||||||||||||||||||||
Sbjct: 160801 atcattacagaaaatgacaa 160820
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>emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chromosome 11 Contains the
             3' end of the Asb3 gene for ankyrin repeat and SOCS
             box-containing protein 3 and two zinc finger protein
             pseudogenes, complete sequence
          Length = 173655

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   cattacagaaaatgacaaaa 131
             ||||||||||||||||||||
Sbjct: 18597 cattacagaaaatgacaaaa 18616
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>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence
          Length = 177721

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    aagattgttgaacagaaaat 164
              ||||||||||||||||||||
Sbjct: 113658 aagattgttgaacagaaaat 113677
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>gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome 13, complete sequence
          Length = 214859

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   atcattacagaaaatgacaa 129
             ||||||||||||||||||||
Sbjct: 35358 atcattacagaaaatgacaa 35339
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>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein
            (vis1) gene, complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 65   actcttattggaacgagggaaaaa 88
            |||||||||||||||| |||||||
Sbjct: 1736 actcttattggaacgaaggaaaaa 1713
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>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein
            (vis1) gene, complete cds
          Length = 2224

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 65   actcttattggaacgagggaaaaa 88
            |||||||||||||||| |||||||
Sbjct: 1703 actcttattggaacgaaggaaaaa 1680
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>gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P18, complete sequence
          Length = 217898

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aaaaaacagaaatacataac 103
              ||||||||||||||||||||
Sbjct: 161134 aaaaaacagaaatacataac 161153
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>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence
          Length = 190133

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    atcattacagaaaatgacaa 129
              ||||||||||||||||||||
Sbjct: 168976 atcattacagaaaatgacaa 168957
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>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence
          Length = 227073

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aaaaaacagaaatacataac 103
              ||||||||||||||||||||
Sbjct: 101064 aaaaaacagaaatacataac 101083
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>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete
           cds
          Length = 1047

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 175 ccttggccatagaaatcatgccca 198
           |||||||||| |||||||||||||
Sbjct: 862 ccttggccattgaaatcatgccca 839
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>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence
          Length = 179814

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 145  aagattgttgaacagaaaat 164
            ||||||||||||||||||||
Sbjct: 3697 aagattgttgaacagaaaat 3716


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,775,729
Number of Sequences: 3902068
Number of extensions: 3775729
Number of successful extensions: 76037
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75929
Number of HSP's gapped (non-prelim): 104
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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