ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX mono... 573 e-160
2ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa855... 157 3e-35
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
4dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
5dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
6dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
7dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
8dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
9dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
10gb|AY108897.1| Zea mays PCO080076 mRNA sequence 131 2e-27
11ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA... 62 1e-06
12ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRO... 62 1e-06
13emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BA... 62 1e-06
14emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BA... 62 1e-06
15gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiro... 62 1e-06
16gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds 62 1e-06
17gb|AY322552.1| Triticum aestivum putative fatty acid desaturase ... 52 0.001
18gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete se... 50 0.005
19gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, com... 46 0.084
20gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, com... 46 0.084
21gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing... 42 1.3
22dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.3
23gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 42 1.3
24gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, com... 40 5.2
25gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, c... 40 5.2
26ref|XM_549074.2| PREDICTED: Canis familiaris hypothetical LOC491... 40 5.2
27gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 40 5.2
28ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 5.2
29emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M... 40 5.2
30gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, comp... 40 5.2
31gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome... 40 5.2
32gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome... 40 5.2
33gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306... 40 5.2
34dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
35emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, ... 40 5.2
36dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 5.2
37gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome... 40 5.2 
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester cyclase
            (Xantha-l) gene, complete cds
          Length = 2097

 Score =  573 bits (289), Expect = e-160
 Identities = 289/289 (100%)
 Strand = Plus / Minus

                                                                        
Query: 99   caggtgagcacaggaagatgtagatcatgttaattaaccatggaccctgtgctcatttag 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2097 caggtgagcacaggaagatgtagatcatgttaattaaccatggaccctgtgctcatttag 2038

                                                                        
Query: 159  agactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcctt 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 agactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcctt 1978

                                                                        
Query: 219  tttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagac 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1977 tttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagac 1918

                                                                        
Query: 279  tcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagga 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1917 tcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagga 1858

                                                             
Query: 339  accctcttcaggttcttcaccaggggcaagtcgttggactctcctatag 387
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 accctcttcaggttcttcaccaggggcaagtcgttggactctcctatag 1809
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>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA
          Length = 1227

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1227 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1168

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1167 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1108

                           
Query: 350  gttcttcaccagggg 364
            |||||||||||||||
Sbjct: 1107 gttcttcaccagggg 1093
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                           
Query: 230     tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
               |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 9875240 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 9875181

                                                                           
Query: 290     catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
               ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 9875180 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 9875121

                              
Query: 350     gttcttcaccagggg 364
               |||||||||||||||
Sbjct: 9875120 gttcttcaccagggg 9875106



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 52      tgatgcagttcactgccactta 73
               ||||||||||||||||||||||
Sbjct: 9875448 tgatgcagttcactgccactta 9875427
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                          
Query: 230    tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
              |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 139490 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 139431

                                                                          
Query: 290    catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
              ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 139430 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 139371

                             
Query: 350    gttcttcaccagggg 364
              |||||||||||||||
Sbjct: 139370 gttcttcaccagggg 139356



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 52     tgatgcagttcactgccactta 73
              ||||||||||||||||||||||
Sbjct: 139698 tgatgcagttcactgccactta 139677
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>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0003H10
          Length = 142418

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                         
Query: 230   tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
             |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 11006 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 10947

                                                                         
Query: 290   catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
             ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 10946 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 10887

                            
Query: 350   gttcttcaccagggg 364
             |||||||||||||||
Sbjct: 10886 gttcttcaccagggg 10872



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 52    tgatgcagttcactgccactta 73
             ||||||||||||||||||||||
Sbjct: 11214 tgatgcagttcactgccactta 11193
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>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full
            insert sequence
          Length = 1691

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1275 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1216

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1215 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1156

                           
Query: 350  gttcttcaccagggg 364
            |||||||||||||||
Sbjct: 1155 gttcttcaccagggg 1141



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 52   tgatgcagttcactgccactta 73
            ||||||||||||||||||||||
Sbjct: 1483 tgatgcagttcactgccactta 1462
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>dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B09, full
           insert sequence
          Length = 618

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                       
Query: 230 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
           |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 350 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 291

                                                                       
Query: 290 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
           ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 290 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 231

                          
Query: 350 gttcttcaccagggg 364
           |||||||||||||||
Sbjct: 230 gttcttcaccagggg 216



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 52  tgatgcagttcactgccactta 73
           ||||||||||||||||||||||
Sbjct: 558 tgatgcagttcactgccactta 537
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>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full
            insert sequence
          Length = 1944

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1265 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1206

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1205 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1146

                           
Query: 350  gttcttcaccagggg 364
            |||||||||||||||
Sbjct: 1145 gttcttcaccagggg 1131



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 52   tgatgcagttcactgccactta 73
            ||||||||||||||||||||||
Sbjct: 1473 tgatgcagttcactgccactta 1452
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>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full
            insert sequence
          Length = 1533

 Score =  157 bits (79), Expect = 3e-35
 Identities = 121/135 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1261 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1202

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1201 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1142

                           
Query: 350  gttcttcaccagggg 364
            |||||||||||||||
Sbjct: 1141 gttcttcaccagggg 1127



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 52   tgatgcagttcactgccactta 73
            ||||||||||||||||||||||
Sbjct: 1469 tgatgcagttcactgccactta 1448
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>gb|AY108897.1| Zea mays PCO080076 mRNA sequence
          Length = 1774

 Score =  131 bits (66), Expect = 2e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                        
Query: 245  gggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagc 304
            ||||||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||
Sbjct: 1251 gggctcaaattcggcgaaatcaaccgagccagactcgatggggggcatgaggtaggcggc 1192

                                                                        
Query: 305  gatgatctcagacactagttgggcaataagaggaaccctcttcaggttcttcaccagggg 364
            ||||||||| ||||| ||   ||| | |||||||| |||||||||||||||||| |||||
Sbjct: 1191 gatgatctcggacaccagagaggcgacaagaggaatcctcttcaggttcttcactagggg 1132

                              
Query: 365  caagtcgttggactctcc 382
             |  |||| |||||||||
Sbjct: 1131 gatttcgtcggactctcc 1114
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>ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA, complete cds
          Length = 1481

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1222 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1281

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1282 agataagcagccaagatctcaga 1304
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>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940 (AT103)
            mRNA, complete cds
          Length = 1602

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1216

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1215 agataagcagccaagatctcaga 1193
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>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16
          Length = 107271

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 234   tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
             |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 94188 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 94129

                                    
Query: 294   aggtacgcagcgatgatctcaga 316
             || || ||||| | |||||||||
Sbjct: 94128 agataagcagccaagatctcaga 94106
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>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3
          Length = 91303

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 6275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 6216

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 6215 agataagcagccaagatctcaga 6193
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>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1)
            mRNA, complete cds
          Length = 1407

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1265 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1206

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1205 agataagcagccaagatctcaga 1183
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>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds
          Length = 1349

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1241 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1182

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1181 agataagcagccaagatctcaga 1159
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>gb|AY322552.1| Triticum aestivum putative fatty acid desaturase TAZIP mRNA,
           partial cds
          Length = 903

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 246 ggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagcg 305
           ||||| |||||||| |||||||| ||||||||||| |  || |||||||| || ||||| 
Sbjct: 902 ggctcgaattcggcgaaatcaacagagccagactcaacaggaggcatgagataagcagcc 843

                     
Query: 306 atgatctcag 315
           | ||||||||
Sbjct: 842 aagatctcag 833
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>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence
          Length = 96930

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 232   agtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggca 291
             |||| ||||| || || ||||| || ||||||||||| || |||||||||||||| ||||
Sbjct: 95940 agtaaacaagttttggttcaaactctgcaaaatcaacagatccagactcgattggtggca 95881

              
Query: 292   t 292
             |
Sbjct: 95880 t 95880
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>gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, complete sequence
          Length = 173716

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 341   cctcttcaggttcttcaccaggg 363
             |||||||||||||||||||||||
Sbjct: 64529 cctcttcaggttcttcaccaggg 64551
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>gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, complete sequence
          Length = 198388

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 341   cctcttcaggttcttcaccaggg 363
             |||||||||||||||||||||||
Sbjct: 21035 cctcttcaggttcttcaccaggg 21013
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>gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing protein gene, complete cds
          Length = 5083

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 330  ataagaggaaccctcttcaggttcttcac 358
            ||||| ||||||||||||| |||||||||
Sbjct: 4641 ataagtggaaccctcttcaagttcttcac 4613
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>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
              sequence
          Length = 194140

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 232    agtagacaagcttgggctcaaattc 256
              ||||||||||||||| |||||||||
Sbjct: 149100 agtagacaagcttggtctcaaattc 149076
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 25      tccgaagcaaaaccggaacac 45
               |||||||||||||||||||||
Sbjct: 2107746 tccgaagcaaaaccggaacac 2107726
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>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence
          Length = 165405

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    atgcatcattatgtttgtaa 196
              ||||||||||||||||||||
Sbjct: 100909 atgcatcattatgtttgtaa 100890
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>gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, complete sequence
          Length = 188821

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     acttcacatacacttctcca 24
             ||||||||||||||||||||
Sbjct: 38617 acttcacatacacttctcca 38598
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>ref|XM_549074.2| PREDICTED: Canis familiaris hypothetical LOC491954 (LOC491954), mRNA
          Length = 2952

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   tctccatccgaagcaaaacc 38
            ||||||||||||||||||||
Sbjct: 2090 tctccatccgaagcaaaacc 2109
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>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete
            sequence
          Length = 200595

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  atgcatcattatgtttgtaa 196
            ||||||||||||||||||||
Sbjct: 1404 atgcatcattatgtttgtaa 1385
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>ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00831.1)
            partial mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 327  gcaataagaggaaccctcttcagg 350
            ||||||||||||||| ||||||||
Sbjct: 2081 gcaataagaggaaccttcttcagg 2058
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>emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M13 on chromosome 6q13-14.3
             Contains the 3' end of the SUMO-1-specific protease
             (SUSP1) gene, the 5' end of the MYO6 gene for Myosin VI
             (DFNA22 KIAA0389) and one CpG island, complete sequence
          Length = 121764

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gagcatgatgcatcattatg 189
             ||||||||||||||||||||
Sbjct: 43566 gagcatgatgcatcattatg 43585
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>gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, complete sequence
          Length = 225231

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    acttcacatacacttctcca 24
            ||||||||||||||||||||
Sbjct: 3287 acttcacatacacttctcca 3268
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>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence
          Length = 206648

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    gtaaagataggcagagatga 212
              ||||||||||||||||||||
Sbjct: 141296 gtaaagataggcagagatga 141277
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>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tgtaaagataggcagagatg 211
             ||||||||||||||||||||
Sbjct: 95539 tgtaaagataggcagagatg 95520
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>gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306A12 map 15q21.1, complete
             sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   agacaagcttgggctcaaat 254
             ||||||||||||||||||||
Sbjct: 64006 agacaagcttgggctcaaat 64025
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>dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B07, full
           insert sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 tttttcgacaaattcagtag 236
           ||||||||||||||||||||
Sbjct: 631 tttttcgacaaattcagtag 612
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>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   atgatgcatcattatgtttg 193
             ||||||||||||||||||||
Sbjct: 72853 atgatgcatcattatgtttg 72872
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     attcggcaaaatcaacggag 272
               ||||||||||||||||||||
Sbjct: 3368423 attcggcaaaatcaacggag 3368442
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>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence
          Length = 217178

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gtaaagataggcagagatga 212
              ||||||||||||||||||||
Sbjct: 162669 gtaaagataggcagagatga 162688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,019,053
Number of Sequences: 3902068
Number of extensions: 3019053
Number of successful extensions: 57847
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57738
Number of HSP's gapped (non-prelim): 100
length of query: 387
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 365
effective length of database: 17,147,199,772
effective search space: 6258727916780
effective search space used: 6258727916780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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