Clone Name | rbaet98c06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SPA9_MOUSE (Q9D7D2) Serpin A9 precursor | 32 | 0.31 | 2 | FASTK_MOUSE (Q9JIX9) Fas-activated serine/threonine kinase (EC 2... | 27 | 9.9 | 3 | ENH5_HUMAN (P61549) HERV-H_19p13.11 provirus ancestral Env polyp... | 27 | 9.9 |
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>SPA9_MOUSE (Q9D7D2) Serpin A9 precursor| Length = 418 Score = 32.3 bits (72), Expect = 0.31 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +1 Query: 10 YRCNSDFSGLQKTHFFNISTAFH 78 + N+DFSG+ KTHF +S A H Sbjct: 333 FNSNADFSGITKTHFLQVSKAAH 355
>FASTK_MOUSE (Q9JIX9) Fas-activated serine/threonine kinase (EC 2.7.11.8) (FAST| kinase) Length = 511 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -2 Query: 153 IERGVLYDESCMVIRFCTSLDVHSRVKC 70 +E+ L D S ++IR C S DVH+ C Sbjct: 96 VEQATLQDLSQLIIRNCPSFDVHTIHVC 123
>ENH5_HUMAN (P61549) HERV-H_19p13.11 provirus ancestral Env polyprotein| precursor (Envelope polyprotein) (Env protein RGH1) (Env protein RTLV-H) [Includes: Surface protein (SU)] Length = 369 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = -2 Query: 291 GRSEPCLCIHPLLSFSYLKSENKPWYARPFSTLVMICCALHDGENKIERGVLYDESCMVI 112 GR PC+ +HP L S S++ P RP S L+ + EN ER +L D C +I Sbjct: 216 GRHLPCISLHPWLP-SPCSSDSPP---RPSSRLL-----IPSPENNSER-LLIDTQCFLI 265 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,229,403 Number of Sequences: 219361 Number of extensions: 825971 Number of successful extensions: 1792 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1763 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1792 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)