ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481483.1| Oryza sativa (japonica cultivar-group), mRNA 182 5e-43
2dbj|AK122060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 5e-43
3gb|AY111787.1| Zea mays CL11185_1 mRNA sequence 151 2e-33
4dbj|AK104927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 7e-33
5dbj|AK111524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
6gb|BT018726.1| Zea mays clone EL01N0518F09.d mRNA sequence 88 2e-14
7gb|AF335551.1|AF335551 Phaseolus vulgaris TGF-beta receptor-inte... 86 9e-14
8gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
9gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
10gb|BT016930.1| Zea mays clone E04912703E02.c mRNA sequence 84 4e-13
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
12dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
13dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
14emb|BX822030.1|CNS0A9BD Arabidopsis thaliana Full-length cDNA Co... 82 1e-12
15gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome... 76 9e-11
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
17ref|NM_201968.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR ... 74 3e-10
18ref|NM_130191.3| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR ... 74 3e-10
19ref|NM_180119.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR ... 74 3e-10
20emb|BX820114.1|CNS0AAC4 Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
21emb|BX820112.1|CNS0AAC3 Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
22emb|BX819310.1|CNS0AADQ Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
23emb|BX820839.1|CNS0A9OL Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
24emb|BX820707.1|CNS0A9OS Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
25emb|BX820633.1|CNS0A9MA Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
26emb|BX820483.1|CNS0A9I1 Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
27emb|BX820257.1|CNS0A9MY Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
28emb|BX820796.1|CNS0A830 Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
29emb|BX819639.1|CNS0A80H Arabidopsis thaliana Full-length cDNA Co... 74 3e-10
30gb|AF285835.1|AF285835 Arabidopsis thaliana eukaryotic initiatio... 74 3e-10
31emb|BX842024.1|CNS09YA9 Arabidopsis thaliana Full-length cDNA Co... 72 1e-09
32gb|U36765.1|ATU36765 Arabidopsis thaliana TGF-beta receptor inte... 70 5e-09
33gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map... 66 8e-08
34gb|AY064633.1| Arabidopsis thaliana eukaryotic translation initi... 66 8e-08
35gb|AF370485.1|AF370485 Arabidopsis thaliana eukaryotic translati... 66 8e-08
36ref|NM_130192.2| Arabidopsis thaliana nucleotide binding AT2G462... 54 3e-04
37dbj|AK118944.1| Arabidopsis thaliana At2g46290 mRNA for putative... 54 3e-04
38gb|AC171734.1| Lycopersicon esculentum chromosome 11 clone C11HB... 54 3e-04
39gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
40dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
42gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete seq... 46 0.078
43gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete s... 46 0.078
44gb|AY378168.1| Cichorium intybus TGF-beta-receptor-interacting p... 44 0.31
45emb|AL671884.3| Human DNA sequence from clone RP13-44L19 on chro... 44 0.31
46emb|CR450728.8| Zebrafish DNA sequence from clone DKEY-204K18 in... 42 1.2
47gb|AY338808.1| Arborimus longicaudus isolate RTVB_I_1 cytochrome... 42 1.2
48gb|AY338791.1| Arborimus longicaudus isolate H_RTVT13 cytochrome... 42 1.2
49gb|AY338789.1| Arborimus longicaudus isolate H_RTVT12 cytochrome... 42 1.2
50gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome 42 1.2
51gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosom... 40 4.8
52emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e... 40 4.8
53gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome... 40 4.8
54gb|AC090396.9| Homo sapiens chromosome 18, clone RP11-868G15, co... 40 4.8
55emb|BX511109.4| Zebrafish DNA sequence from clone DKEY-288G16 in... 40 4.8
56dbj|AB194638.1| Leek yellow stripe virus gene for coat protein, ... 40 4.8
57gb|AC090354.8| Homo sapiens chromosome 18, clone RP11-735P10, co... 40 4.8
58gb|AC096717.3| Homo sapiens BAC clone RP11-10O3 from 4, complete... 40 4.8
59gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32... 40 4.8
60gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome... 40 4.8
61dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.8 
>ref|XM_481483.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 981

 Score =  182 bits (92), Expect = 5e-43
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                       
Query: 173 atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
           ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 977 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 918

                                                                       
Query: 233 ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 292
           |||||||||||||||| |||||||||||||||||| |  || || |||||||||||||| 
Sbjct: 917 ccactcgaaaagctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatgg 858

                                                                       
Query: 293 cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatctcgcctcgaattta 352
           ||||||||||||||||| || ||||  ||||||||||| |||||| |||| || ||||| 
Sbjct: 857 cctttaacaccaccaatttcctcttgcaaaatcttgtgaaaaaatttcgcttcaaatttt 798

                   
Query: 353 cctgcacg 360
           ||||||||
Sbjct: 797 cctgcacg 790
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>dbj|AK122060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115B09, full
            insert sequence
          Length = 1437

 Score =  182 bits (92), Expect = 5e-43
 Identities = 164/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 173  atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
            ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 1126 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 1067

                                                                        
Query: 233  ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 292
            |||||||||||||||| |||||||||||||||||| |  || || |||||||||||||| 
Sbjct: 1066 ccactcgaaaagctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatgg 1007

                                                                        
Query: 293  cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatctcgcctcgaattta 352
            ||||||||||||||||| || ||||  ||||||||||| |||||| |||| || ||||| 
Sbjct: 1006 cctttaacaccaccaatttcctcttgcaaaatcttgtgaaaaaatttcgcttcaaatttt 947

                    
Query: 353  cctgcacg 360
            ||||||||
Sbjct: 946  cctgcacg 939
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>gb|AY111787.1| Zea mays CL11185_1 mRNA sequence
          Length = 623

 Score =  151 bits (76), Expect = 2e-33
 Identities = 148/172 (86%)
 Strand = Plus / Plus

                                                                       
Query: 191 tcaggatcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctc 250
           |||| ||||||||| || ||||| ||||||||||| ||||| ||||| |||||||||| |
Sbjct: 367 tcagaatcaaaatgatgcagccttacatatccatcttcaccaccacttgaaaagctccgc 426

                                                                       
Query: 251 ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaatc 310
           ||||||||||||||||| || ||||| ||||| |||||||| ||||||||||||||||| 
Sbjct: 427 ccatcaggattaaatgccaaagcattaattggcccaaaatgccctttaacaccaccaatt 486

                                                               
Query: 311 tcttcttctaaaatcttgtggaaaaatctcgcctcgaatttacctgcacggc 362
           || ||||  ||||||||| || | ||| | ||||| |||||||| |||||||
Sbjct: 487 tcctcttgcaaaatcttgcggtagaatttagcctcaaatttaccagcacggc 538
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>dbj|AK104927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H11, full
            insert sequence
          Length = 1395

 Score =  149 bits (75), Expect = 7e-33
 Identities = 153/179 (85%)
 Strand = Plus / Minus

                                                                        
Query: 173  atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
            ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 1100 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 1041

                                                                        
Query: 233  ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 292
            |||||||| |||||||  ||||||||||||||||| | ||| || |||||||||||||| 
Sbjct: 1040 ccactcgagaagctccgtccatcaggattaaatgccagtgcgttaattggtccaaaatgg 981

                                                                       
Query: 293  cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatctcgcctcgaattt 351
            ||||| ||||||||||| || ||||  ||||||||||| || ||| |||| || |||||
Sbjct: 980  ccttttacaccaccaatttcctcttgcaaaatcttgtgaaagaatttcgcttcaaattt 922
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>dbj|AK111524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P07, full
            insert sequence
          Length = 1396

 Score =  141 bits (71), Expect = 2e-30
 Identities = 152/179 (84%)
 Strand = Plus / Minus

                                                                        
Query: 173  atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
            ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 1101 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 1042

                                                                        
Query: 233  ccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgt 292
            |||||||| |||| ||  ||||||||||||||||| | ||| || |||||||||||||| 
Sbjct: 1041 ccactcgagaagccccgtccatcaggattaaatgccagtgcgttaattggtccaaaatgg 982

                                                                       
Query: 293  cctttaacaccaccaatctcttcttctaaaatcttgtggaaaaatctcgcctcgaattt 351
            ||||| ||||||||||| || ||||  ||||||||||| || ||| |||| || |||||
Sbjct: 981  ccttttacaccaccaatttcctcttgcaaaatcttgtgaaagaatttcgcttcaaattt 923
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>gb|BT018726.1| Zea mays clone EL01N0518F09.d mRNA sequence
          Length = 1706

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                       
Query: 245 ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
           |||| |||||||||||||||||| || ||||| ||||| |||||||| ||||||||||||
Sbjct: 117 ctccgcccatcaggattaaatgccaaagcattaattggcccaaaatgccctttaacacca 58

                                                           
Query: 305 ccaatctcttcttctaaaatcttgtggaaaaatctcgcctcgaattta 352
           ||||| || | ||  |||||||||||| | ||| | ||||| ||||||
Sbjct: 57  ccaatttcctgttgcaaaatcttgtggtagaatttagcctcaaattta 10



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 191  tcaggatcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagct 246
            |||| ||||||||| || ||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 1202 tcagaatcaaaatgatgcagccttacatatccatcttcaccaccacttgaaaagct 1147
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>gb|AF335551.1|AF335551 Phaseolus vulgaris TGF-beta receptor-interacting protein 1 mRNA,
           complete cds
          Length = 1143

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                       
Query: 215 acatatccatcctcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgca 274
           ||||| ||||| ||||| ||||| ||||| ||  | |||||||| ||||| || ||||||
Sbjct: 950 acataaccatcttcacctccacttgaaaaactttttccatcagggttaaaggccaatgca 891

                                                      
Query: 275 ttgattggtccaaaatgtcctttaacaccaccaatctcttctt 317
           || |||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 890 ttaattggtccaaaatgtcctttcacacccccaatttcttctt 848
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>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12,
              complete sequence
          Length = 131944

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                          
Query: 173    atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
              ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 118965 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 118906

                            
Query: 233    ccactcgaaaagct 246
              ||||||||||||||
Sbjct: 118905 ccactcgaaaagct 118892



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                          
Query: 245    ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
              |||| |||||||||||||||||| |  || || |||||||||||||| ||||||||||||
Sbjct: 117714 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 117655

                                    
Query: 305    ccaatctcttcttctaaaatct 326
              ||||| || ||||  |||||||
Sbjct: 117654 ccaatttcctcttgcaaaatct 117633
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>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05,
             complete sequence
          Length = 82985

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 173   atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
             ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 13484 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 13425

                           
Query: 233   ccactcgaaaagct 246
             ||||||||||||||
Sbjct: 13424 ccactcgaaaagct 13411



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                         
Query: 245   ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
             |||| |||||||||||||||||| |  || || |||||||||||||| ||||||||||||
Sbjct: 12233 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 12174

                                   
Query: 305   ccaatctcttcttctaaaatct 326
             ||||| || ||||  |||||||
Sbjct: 12173 ccaatttcctcttgcaaaatct 12152
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>gb|BT016930.1| Zea mays clone E04912703E02.c mRNA sequence
          Length = 357

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 170 tacatctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctca 229
           |||||||| ||| |||| || || | ||||||||| || ||||| ||||||||||| |||
Sbjct: 256 tacatcttgatgctgaagtagtcggaatcaaaatgatgcagccttacatatccatcttca 315

                                                 
Query: 230 ccgccactcgaaaagctcctcccatcaggattaaatgc 267
           || ||||| ||||| |||| ||||||||||||||||||
Sbjct: 316 ccaccacttgaaaaactccgcccatcaggattaaatgc 353
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 173      atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
                ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 12900206 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 12900265

                              
Query: 233      ccactcgaaaagct 246
                ||||||||||||||
Sbjct: 12900266 ccactcgaaaagct 12900279



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                            
Query: 245      ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
                |||| |||||||||||||||||| |  || || |||||||||||||| ||||||||||||
Sbjct: 12901457 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 12901516

                                      
Query: 305      ccaatctcttcttctaaaatct 326
                ||||| || ||||  |||||||
Sbjct: 12901517 ccaatttcctcttgcaaaatct 12901538
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>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone: B1052H09
          Length = 190806

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 173   atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
             ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 37186 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 37245

                           
Query: 233   ccactcgaaaagct 246
             ||||||||||||||
Sbjct: 37246 ccactcgaaaagct 37259



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                         
Query: 245   ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
             |||| |||||||||||||||||| |  || || |||||||||||||| ||||||||||||
Sbjct: 38437 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 38496

                                   
Query: 305   ccaatctcttcttctaaaatct 326
             ||||| || ||||  |||||||
Sbjct: 38497 ccaatttcctcttgcaaaatct 38518
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>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0061E21
          Length = 155085

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                          
Query: 173    atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
              ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 100724 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 100783

                            
Query: 233    ccactcgaaaagct 246
              ||||||||||||||
Sbjct: 100784 ccactcgaaaagct 100797



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                          
Query: 245    ctcctcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
              |||| |||||||||||||||||| |  || || |||||||||||||| ||||||||||||
Sbjct: 101975 ctccgcccatcaggattaaatgccagcgcgttaattggtccaaaatggcctttaacacca 102034

                                    
Query: 305    ccaatctcttcttctaaaatct 326
              ||||| || ||||  |||||||
Sbjct: 102035 ccaatttcctcttgcaaaatct 102056
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>emb|BX822030.1|CNS0A9BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL93ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1117

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 990 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 931

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||||||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 930 ggattaaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 878
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>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11,
              complete sequence
          Length = 146677

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                          
Query: 173    atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
              ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 124859 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 124800

                            
Query: 233    ccactcgaaaagct 246
              |||||||| |||||
Sbjct: 124799 ccactcgagaagct 124786



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                          
Query: 251    ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaatc 310
              ||||||||||||||||| | ||| || |||||||||||||| ||||| ||||||||||| 
Sbjct: 123428 ccatcaggattaaatgccagtgcgttaattggtccaaaatggccttttacaccaccaatt 123369

                              
Query: 311    tcttcttctaaaatct 326
              || ||||  |||||||
Sbjct: 123368 tcctcttgcaaaatct 123353
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                           
Query: 173     atctttatgttgaaatactcaggatcaaaatggtgtagcctgacatatccatcctcaccg 232
               ||||| |||||||| || |||| |||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 9352914 atcttgatgttgaagtagtcagaatcaaaatggtgcagccttacatatccatcttcacca 9352855

                             
Query: 233     ccactcgaaaagct 246
               |||||||| |||||
Sbjct: 9352854 ccactcgagaagct 9352841



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                           
Query: 251     ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaatc 310
               ||||||||||||||||| | ||| || |||||||||||||| ||||| ||||||||||| 
Sbjct: 9351483 ccatcaggattaaatgccagtgcgttaattggtccaaaatggccttttacaccaccaatt 9351424

                               
Query: 311     tcttcttctaaaatct 326
               || ||||  |||||||
Sbjct: 9351423 tcctcttgcaaaatct 9351408
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>ref|NM_201968.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN
            1); nucleotide binding AT2G46280 (TRIP-1) transcript
            variant AT2G46280.3 mRNA, complete cds
          Length = 1391

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
            |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 1164 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1105

                                                                 
Query: 257  ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 1104 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 1052
to top
>ref|NM_130191.3| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN
            1); nucleotide binding AT2G46280 (TRIP-1) transcript
            variant AT2G46280.1 mRNA, complete cds
          Length = 1311

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
            |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 1071 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1012

                                                                 
Query: 257  ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 1011 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 959
to top
>ref|NM_180119.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN
            1); nucleotide binding AT2G46280 (TRIP-1) transcript
            variant AT2G46280.2 mRNA, complete cds
          Length = 1255

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
            |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 1015 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 956

                                                                 
Query: 257  ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 955  ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 903
to top
>emb|BX820114.1|CNS0AAC4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS75ZC02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1142

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 989 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 930

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 929 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 877
to top
>emb|BX820112.1|CNS0AAC3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS74ZH09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1239

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 990 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 931

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 930 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 878
to top
>emb|BX819310.1|CNS0AADQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB67ZC11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1098

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 947 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 888

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 887 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 835
to top
>emb|BX820839.1|CNS0A9OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZE08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1227

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 990 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 931

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 930 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 878
to top
>emb|BX820707.1|CNS0A9OS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZB03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1142

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 989 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 930

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 929 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 877
to top
>emb|BX820633.1|CNS0A9MA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH54ZE08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 676

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 500 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 441

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 440 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 388
to top
>emb|BX820483.1|CNS0A9I1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH39ZC08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1117

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 197 tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
           |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 989 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 930

                                                                
Query: 257 ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
           ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 929 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 877
to top
>emb|BX820257.1|CNS0A9MY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH13ZE03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1203

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
            |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 1068 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1009

                                                                 
Query: 257  ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 1008 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 956
to top
>emb|BX820796.1|CNS0A830 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH6ZE03 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1370

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
            |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 1142 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1083

                                                                 
Query: 257  ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 1082 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 1030
to top
>emb|BX819639.1|CNS0A80H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS10ZA11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1228

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
            |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 1069 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 1010

                                                                 
Query: 257  ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 1009 ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 957
to top
>gb|AF285835.1|AF285835 Arabidopsis thaliana eukaryotic initiation factor 3I1 subunit
            (TIF3I1) mRNA, complete cds
          Length = 1200

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  tcaaaatggtgtagcctgacatatccatcctcaccgccactcgaaaagctcctcccatca 256
            |||||||| || ||||| || || || || ||||| ||||| || || ||| ||||||||
Sbjct: 1013 tcaaaatgatgcagcctcacgtaaccgtcttcacctccactagagaaactcttcccatca 954

                                                                 
Query: 257  ggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||
Sbjct: 953  ggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaat 901
to top
>emb|BX842024.1|CNS09YA9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZG03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1086

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 226 ctcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcc 285
           |||||| ||||| || || ||| ||||||||||||| ||||| || ||||| || |||||
Sbjct: 961 ctcacctccactagagaaactcttcccatcaggattgaatgccaaagcatttataggtcc 902

                                   
Query: 286 aaaatgtcctttaacaccaccaat 309
           |||||| ||||| |||||||||||
Sbjct: 901 aaaatgacctttcacaccaccaat 878
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>gb|U36765.1|ATU36765 Arabidopsis thaliana TGF-beta receptor interacting protein 1
           homolog mRNA, complete cds
          Length = 1138

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 227 tcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcca 286
           ||||| ||||| || || ||| ||||||||||||| ||||| || ||||| || ||||||
Sbjct: 934 tcacctccactagagaaactcttcccatcaggattgaatgccaaagcatttataggtcca 875

                                  
Query: 287 aaatgtcctttaacaccaccaat 309
           ||||| ||||| |||||||||||
Sbjct: 874 aaatgacctttcacaccaccaat 852
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>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete
             sequence
          Length = 110149

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 249   tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 308
             ||||||||||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||
Sbjct: 19724 tcccatcaggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaa 19665

              
Query: 309   t 309
             |
Sbjct: 19664 t 19664



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 249   tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 308
             ||||||||||| | ||||| || ||||| || ||||||||||| ||||| || |||||||
Sbjct: 17476 tcccatcaggactgaatgccaaagcattaataggtccaaaatgacctttcacgccaccaa 17417

              
Query: 309   t 309
             |
Sbjct: 17416 t 17416
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>gb|AY064633.1| Arabidopsis thaliana eukaryotic translation initiation factor 3
           delta subunit (At2g46280; T3F17.7) mRNA, complete cds
          Length = 1011

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 249 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 308
           ||||||||||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||
Sbjct: 907 tcccatcaggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaa 848

            
Query: 309 t 309
           |
Sbjct: 847 t 847
to top
>gb|AF370485.1|AF370485 Arabidopsis thaliana eukaryotic translation initiation factor 3
           delta subunit (At2g46280; T3F17.7) mRNA, complete cds
          Length = 1205

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 249 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 308
           ||||||||||||| ||||| || ||||| || ||||||||||| ||||| ||||||||||
Sbjct: 963 tcccatcaggattgaatgccaaagcatttataggtccaaaatgacctttcacaccaccaa 904

            
Query: 309 t 309
           |
Sbjct: 903 t 903
to top
>ref|NM_130192.2| Arabidopsis thaliana nucleotide binding AT2G46290 mRNA, complete cds
          Length = 1283

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 227  tcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcca 286
            ||||| ||||| || || ||| ||||||||||| | ||||| || ||||| || ||||||
Sbjct: 1091 tcacctccactagagaaactcttcccatcaggactgaatgccaaagcattaataggtcca 1032

                                   
Query: 287  aaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||||||
Sbjct: 1031 aaatgacctttcacgccaccaat 1009
to top
>dbj|AK118944.1| Arabidopsis thaliana At2g46290 mRNA for putative eukaryotic
            translation initiation factor 3 delta subunit, complete
            cds, clone: RAFL21-28-F22
          Length = 1283

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 227  tcaccgccactcgaaaagctcctcccatcaggattaaatgctaatgcattgattggtcca 286
            ||||| ||||| || || ||| ||||||||||| | ||||| || ||||| || ||||||
Sbjct: 1091 tcacctccactagagaaactcttcccatcaggactgaatgccaaagcattaataggtcca 1032

                                   
Query: 287  aaatgtcctttaacaccaccaat 309
            ||||| ||||| || ||||||||
Sbjct: 1031 aaatgacctttcacgccaccaat 1009
to top
>gb|AC171734.1| Lycopersicon esculentum chromosome 11 clone C11HBa0064J13, complete
              sequence
          Length = 118649

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                     
Query: 249    tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacc 303
              ||||||||||||| || || || ||||| |||||||||||||| ||||| |||||
Sbjct: 110751 tcccatcaggattgaaagccaaagcatttattggtccaaaatgccctttgacacc 110697
to top
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0030E22, complete sequence
          Length = 135468

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                    
Query: 251    ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
              ||||||||||||||||| |   | || |||||||||||||| ||||||||||||
Sbjct: 104024 ccatcaggattaaatgccagcacgttaattggtccaaaatggcctttaacacca 103971
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 251      ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
                ||||||||||||||||| |   | || |||||||||||||| ||||||||||||
Sbjct: 22546879 ccatcaggattaaatgccagcacgttaattggtccaaaatggcctttaacacca 22546826
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 251      ccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacacca 304
                ||||||||||||||||| |   | || |||||||||||||| ||||||||||||
Sbjct: 22856790 ccatcaggattaaatgccagcacgttaattggtccaaaatggcctttaacacca 22856737
to top
>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence
          Length = 130054

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 271   tgcattgattggtccaaaatgtcctttaacaccaccaatctcttctt 317
             |||||| || ||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 62005 tgcattaatcggtccaaaatgccctttcacacccccaatttcttctt 61959
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>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 271   tgcattgattggtccaaaatgtcctttaacaccaccaatctcttctt 317
             |||||| || ||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 83497 tgcattaatcggtccaaaatgccctttcacacccccaatttcttctt 83543
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>gb|AY378168.1| Cichorium intybus TGF-beta-receptor-interacting protein-like mRNA,
           partial sequence
          Length = 588

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 67/81 (82%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                       
Query: 249 tcccatcaggattaaatgctaatgcattgattggtccaaaatgtcctttaacaccaccaa 308
           |||||||||| || || || || ||||| ||||| |||||||| |||||| |  | ||||
Sbjct: 500 tcccatcagggttgaaagccaaagcatttattggaccaaaatgccctttagc--ctccaa 443

                                
Query: 309 tctcttcttctaaaatcttgt 329
           ||||||||| ||||| |||||
Sbjct: 442 tctcttcttgtaaaaccttgt 422
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>emb|AL671884.3| Human DNA sequence from clone RP13-44L19 on chromosome 6 Contains the
             gene for mandaselin (FLJ12838) and a CpG island, complete
             sequence
          Length = 105273

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 260   ttaaatgctaatgcattgattg 281
             ||||||||||||||||||||||
Sbjct: 61721 ttaaatgctaatgcattgattg 61700
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>emb|CR450728.8| Zebrafish DNA sequence from clone DKEY-204K18 in linkage group 8,
              complete sequence
          Length = 193025

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    tgacatatccatcctcaccgc 233
              |||||||||||||||||||||
Sbjct: 175786 tgacatatccatcctcaccgc 175806
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>gb|AY338808.1| Arborimus longicaudus isolate RTVB_I_1 cytochrome b gene, partial
           cds; mitochondrial
          Length = 664

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 250 cccatcaggattaaatgctaatgca 274
           |||||||||||||||| ||||||||
Sbjct: 312 cccatcaggattaaattctaatgca 336
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>gb|AY338791.1| Arborimus longicaudus isolate H_RTVT13 cytochrome b gene, partial
           cds; mitochondrial
          Length = 664

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 250 cccatcaggattaaatgctaatgca 274
           |||||||||||||||| ||||||||
Sbjct: 312 cccatcaggattaaattctaatgca 336
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>gb|AY338789.1| Arborimus longicaudus isolate H_RTVT12 cytochrome b gene, partial
           cds; mitochondrial
          Length = 664

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 250 cccatcaggattaaatgctaatgca 274
           |||||||||||||||| ||||||||
Sbjct: 312 cccatcaggattaaattctaatgca 336
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>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    caaaatgtcctttaacaccac 305
              |||||||||||||||||||||
Sbjct: 135296 caaaatgtcctttaacaccac 135316
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>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence
          Length = 228750

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    aggtgctattacacagtaga 59
             ||||||||||||||||||||
Sbjct: 90464 aggtgctattacacagtaga 90483
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>emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e5, COMPLETE SEQUENCE
          Length = 132419

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     caatttaagcatccccattg 23
             ||||||||||||||||||||
Sbjct: 39233 caatttaagcatccccattg 39214
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>gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome 8, complete sequence
          Length = 234359

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   ttacatctttatgttgaaat 188
             ||||||||||||||||||||
Sbjct: 65199 ttacatctttatgttgaaat 65218
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>gb|AC090396.9| Homo sapiens chromosome 18, clone RP11-868G15, complete sequence
          Length = 215375

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     aagtcaagttctctcacaaa 89
              ||||||||||||||||||||
Sbjct: 185295 aagtcaagttctctcacaaa 185276
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>emb|BX511109.4| Zebrafish DNA sequence from clone DKEY-288G16 in linkage group 7,
             complete sequence
          Length = 124061

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   ccatcaggattaaatgctaa 270
             ||||||||||||||||||||
Sbjct: 31126 ccatcaggattaaatgctaa 31145
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>dbj|AB194638.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Saga.Kikai#1
          Length = 864

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 cagcagccttgagaaattca 163
           ||||||||||||||||||||
Sbjct: 728 cagcagccttgagaaattca 747
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>gb|AC090354.8| Homo sapiens chromosome 18, clone RP11-735P10, complete sequence
          Length = 211162

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aagtcaagttctctcacaaa 89
             ||||||||||||||||||||
Sbjct: 86221 aagtcaagttctctcacaaa 86202
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>gb|AC096717.3| Homo sapiens BAC clone RP11-10O3 from 4, complete sequence
          Length = 109027

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   ctaaaatcttgtggaaaaat 337
             ||||||||||||||||||||
Sbjct: 18219 ctaaaatcttgtggaaaaat 18200
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>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete
             sequence
          Length = 82454

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    aaattgagccaaaagaaaaagcta 110
             |||||||| |||||||||||||||
Sbjct: 31678 aaattgagacaaaagaaaaagcta 31701
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>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence
          Length = 207128

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ttacatctttatgttgaaat 188
              ||||||||||||||||||||
Sbjct: 170477 ttacatctttatgttgaaat 170496
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>dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-794P6, complete
             sequences
          Length = 194973

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 252   catcaggattaaatgctaatgcat 275
             ||||||||| ||||||||||||||
Sbjct: 98206 catcaggataaaatgctaatgcat 98183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,907,312
Number of Sequences: 3902068
Number of extensions: 3907312
Number of successful extensions: 69307
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 69102
Number of HSP's gapped (non-prelim): 203
length of query: 362
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 340
effective length of database: 17,147,199,772
effective search space: 5830047922480
effective search space used: 5830047922480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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