Clone Name | rbaet98b12 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_115353.3| Arabidopsis thaliana ATPDIL1-3; electron transporter/ isomerase/ thiol-disulfide exchange intermediate AT3G54960 (ATPDIL1-3) mRNA, complete cds Length = 1960 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 aaaactgagatcgtcttcc 72 ||||||||||||||||||| Sbjct: 780 aaaactgagatcgtcttcc 762
>gb|AC139043.6| Mus musculus chromosome 3, clone RP23-321I11, complete sequence Length = 194537 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 tggtcagcagcacatttca 24 ||||||||||||||||||| Sbjct: 14248 tggtcagcagcacatttca 14230
>gb|BT000172.1| Arabidopsis thaliana protein disulfide-isomerase-like protein (At3g54960) mRNA, complete cds Length = 1817 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 aaaactgagatcgtcttcc 72 ||||||||||||||||||| Sbjct: 762 aaaactgagatcgtcttcc 744
>emb|AL132970.2|ATT15C9 Arabidopsis thaliana DNA chromosome 3, BAC clone T15C9 Length = 84601 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 aaaactgagatcgtcttcc 72 ||||||||||||||||||| Sbjct: 18281 aaaactgagatcgtcttcc 18299
>emb|AL049655.2|ATF28P10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28P10 Length = 90736 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 aaaactgagatcgtcttcc 72 ||||||||||||||||||| Sbjct: 21868 aaaactgagatcgtcttcc 21850
>emb|AJ271376.1|ATH271376 Arabidopsis thaliana mRNA for ERp72 (pdi72 gene) Length = 2030 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 aaaactgagatcgtcttcc 72 ||||||||||||||||||| Sbjct: 838 aaaactgagatcgtcttcc 820
>gb|AY093115.1| Arabidopsis thaliana protein disulfide-isomerase-like protein (At3g54960) mRNA, complete cds Length = 1888 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 aaaactgagatcgtcttcc 72 ||||||||||||||||||| Sbjct: 780 aaaactgagatcgtcttcc 762
>emb|BX823657.1|CNS0A6MM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1857 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 aaaactgagatcgtcttcc 72 ||||||||||||||||||| Sbjct: 764 aaaactgagatcgtcttcc 746
>dbj|AP001889.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-344L21, complete sequence Length = 186656 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 ttggtcagcagcacatttc 23 ||||||||||||||||||| Sbjct: 90192 ttggtcagcagcacatttc 90210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 568,959 Number of Sequences: 3902068 Number of extensions: 568959 Number of successful extensions: 31712 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31703 Number of HSP's gapped (non-prelim): 9 length of query: 82 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 61 effective length of database: 17,151,101,840 effective search space: 1046217212240 effective search space used: 1046217212240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)