ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet98b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 129 5e-27
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 129 5e-27
3dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 5e-27
4dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 4e-12
5ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 50 0.004
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
8dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
9dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
10dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
11dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
12gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, comp... 44 0.25
13gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, comp... 44 0.25
14ref|NM_001031296.1| Gallus gallus splicing factor, arginine/seri... 42 0.98
15emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clo... 42 0.98
16emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22 42 0.98
17ref|XM_464952.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.9
18gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, co... 40 3.9
19gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, comple... 40 3.9
20emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in... 40 3.9
21gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, co... 40 3.9
22emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 40 3.9
23gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regu... 40 3.9
24dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH30316... 40 3.9
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
26dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor... 40 3.9
27gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoieti... 40 3.9
28dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
29dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
30gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q... 40 3.9
31gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, co... 40 3.9
32gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosom... 40 3.9
33emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 40 3.9
34emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on ch... 40 3.9 
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  129 bits (65), Expect = 5e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                         
Query: 161   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
             ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 89775 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 89716

                                                                         
Query: 221   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
             |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 89715 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 89656

                  
Query: 281   gacgt 285
             |||||
Sbjct: 89655 gacgt 89651



 Score =  123 bits (62), Expect = 3e-25
 Identities = 107/122 (87%)
 Strand = Plus / Minus

                                                                         
Query: 161   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
             ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 92274 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 92215

                                                                         
Query: 221   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
             | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 92214 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 92155

               
Query: 281   ga 282
             ||
Sbjct: 92154 ga 92153



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 109/129 (84%)
 Strand = Plus / Minus

                                                                         
Query: 158   ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 217
             |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 96657 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 96598

                                                                         
Query: 218   ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 277
             |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 96597 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 96538

                      
Query: 278   accgacgtc 286
             |||||||||
Sbjct: 96537 accgacgtc 96529



 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                      
Query: 236    aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcgg 291
              |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||
Sbjct: 103640 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcgg 103585
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  129 bits (65), Expect = 5e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
                ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 19489063 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 19489004

                                                                            
Query: 221      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
                |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 19489003 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 19488944

                     
Query: 281      gacgt 285
                |||||
Sbjct: 19488943 gacgt 19488939



 Score =  123 bits (62), Expect = 3e-25
 Identities = 107/122 (87%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
                ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 19491562 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 19491503

                                                                            
Query: 221      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
                | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 19491502 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 19491443

                  
Query: 281      ga 282
                ||
Sbjct: 19491442 ga 19491441



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 109/129 (84%)
 Strand = Plus / Minus

                                                                            
Query: 158      ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 217
                |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 19495945 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 19495886

                                                                            
Query: 218      ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 277
                |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 19495885 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 19495826

                         
Query: 278      accgacgtc 286
                |||||||||
Sbjct: 19495825 accgacgtc 19495817



 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                        
Query: 236      aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcgg 291
                |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||
Sbjct: 19502928 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcgg 19502873
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>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full
            insert sequence
          Length = 1474

 Score =  129 bits (65), Expect = 5e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 161  aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
            ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 1343 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 1284

                                                                        
Query: 221  gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
            |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 1283 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 1224

                 
Query: 281  gacgt 285
            |||||
Sbjct: 1223 gacgt 1219
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>dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M15, full
            insert sequence
          Length = 1741

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 236  aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcgg 291
            |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||
Sbjct: 1519 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcgg 1464
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>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 233  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1181 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1133
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 233      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
                |||||| |||||||| | ||||||||| |||| || |||||||||||||
Sbjct: 15506035 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccg 15505987
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 233      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
                |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 41126162 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 41126210
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 233   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
             |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 23217 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 23265
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>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0689B09
          Length = 144932

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 233   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
             |||||| |||||||| | ||||||||| |||| || |||||||||||||
Sbjct: 26890 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccg 26842
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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 233    tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
              |||||| |||||||| | ||||||||| |||| || |||||||||||||
Sbjct: 155327 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccg 155279
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>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
            insert sequence
          Length = 1405

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 233  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1102 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1054
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>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence
          Length = 142656

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 25     gttgattattcaaacagccaaa 46
              ||||||||||||||||||||||
Sbjct: 119629 gttgattattcaaacagccaaa 119650
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>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence
          Length = 154939

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 25    gttgattattcaaacagccaaa 46
             ||||||||||||||||||||||
Sbjct: 70617 gttgattattcaaacagccaaa 70638
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>ref|NM_001031296.1| Gallus gallus splicing factor, arginine/serine-rich 11 (SFRS11), mRNA
          Length = 2625

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clone 20o8
          Length = 2625

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22
          Length = 759

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 40  agccaaaacaaaacccagggggaaa 64
           ||||||||||||||||| |||||||
Sbjct: 194 agccaaaacaaaacccacggggaaa 170
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>ref|XM_464952.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3558

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   acaaattttgactgcaatct 91
            ||||||||||||||||||||
Sbjct: 1744 acaaattttgactgcaatct 1763
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>gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, complete sequence
          Length = 121683

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 121155 aaacacacaaacaaattttg 121136



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 116267 aaacacacaaacaaattttg 116248



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 113475 aaacacacaaacaaattttg 113456



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 108605 aaacacacaaacaaattttg 108586



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 104518 aaacacacaaacaaattttg 104499
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>gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, complete sequence
          Length = 196803

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gcaagcacacatatcatctt 118
             ||||||||||||||||||||
Sbjct: 56902 gcaagcacacatatcatctt 56921
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>emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in linkage group 18,
             complete sequence
          Length = 30929

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gggggaaacacacaaacaaa 76
             ||||||||||||||||||||
Sbjct: 14594 gggggaaacacacaaacaaa 14613
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>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence
          Length = 209936

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    acccaaggcggaagttgttgcagg 179
              ||||||||| ||||||||||||||
Sbjct: 191105 acccaaggctgaagttgttgcagg 191128
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>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cagggaggagctgaacccga 215
             ||||||||||||||||||||
Sbjct: 38983 cagggaggagctgaacccga 38964
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>gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regulatory, type II,
           beta, mRNA (cDNA clone MGC:87711 IMAGE:30331962),
           complete cds
          Length = 3745

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 225 gctgcagatcgaactccagcaggt 248
           |||||||| |||||||||||||||
Sbjct: 317 gctgcagagcgaactccagcaggt 294
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>dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH3031660, highly  similar
           to cAMP-dependent protein kinase type II-beta regulatory
           chain
          Length = 3470

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 225 gctgcagatcgaactccagcaggt 248
           |||||||| |||||||||||||||
Sbjct: 127 gctgcagagcgaactccagcaggt 104
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 29       attattcaaacagccaaaacaaaaccca 56
                ||||| ||||||||||||| ||||||||
Sbjct: 23775776 attatccaaacagccaaaaaaaaaccca 23775803



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       acaaattttgactgcaatct 91
                ||||||||||||||||||||
Sbjct: 10505544 acaaattttgactgcaatct 10505563
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>dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor, complete cds
          Length = 11451

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 10145 attattcaaacagccaaaccaaaa 10122
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>gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoietin A; scatter factor)
             (HGF) gene, complete cds
          Length = 73491

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 71267 attattcaaacagccaaaccaaaa 71244
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>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0063E14
          Length = 174415

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acaaattttgactgcaatct 91
             ||||||||||||||||||||
Sbjct: 86712 acaaattttgactgcaatct 86731
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 29    attattcaaacagccaaaacaaaaccca 56
             ||||| ||||||||||||| ||||||||
Sbjct: 86360 attatccaaacagccaaaaaaaaaccca 86387
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>gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q11.23-q21, complete sequence
          Length = 143834

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 47574 attattcaaacagccaaaccaaaa 47597
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>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence
          Length = 248750

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   acccaaggcggaagttgttgcagg 179
             ||||||||| ||||||||||||||
Sbjct: 12934 acccaaggctgaagttgttgcagg 12957
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>gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosome 10, complete
             sequence
          Length = 105368

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 33049 aaacacacaaacaaattttg 33068



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 28962 aaacacacaaacaaattttg 28981



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 24092 aaacacacaaacaaattttg 24111



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 21300 aaacacacaaacaaattttg 21319



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 16412 aaacacacaaacaaattttg 16431
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>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   actccagcaggttgtcctcc 256
             ||||||||||||||||||||
Sbjct: 28862 actccagcaggttgtcctcc 28881
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>emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on chromosome 4, complete
             sequence
          Length = 211585

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcaaacagccaaaacaaaac 53
             ||||||||||||||||||||
Sbjct: 19090 tcaaacagccaaaacaaaac 19071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,594,406
Number of Sequences: 3902068
Number of extensions: 3594406
Number of successful extensions: 66932
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66771
Number of HSP's gapped (non-prelim): 158
length of query: 295
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 273
effective length of database: 17,147,199,772
effective search space: 4681185537756
effective search space used: 4681185537756
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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