>emb|AJ006296.1|HVU6296 Hordeum vulgare partial mRNA for chlorophyll a/b-binding protein
          Length = 470

 Score =  436 bits (220), Expect = e-119
 Identities = 220/220 (100%)
 Strand = Plus / Minus

                                                                       
Query: 20  ttgagtcaccattggttcatattttacaaatcaccaagtcccagcagctctcctatgtga 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttgagtcaccattggttcatattttacaaatcaccaagtcccagcagctctcctatgtga 378

                                                                       
Query: 80  tcggaccagcattataatcaacaaaggatctttgcgataccctctcatccatcactcgtc 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcggaccagcattataatcaacaaaggatctttgcgataccctctcatccatcactcgtc 318

                                                                       
Query: 140 atacaaaaccaaagcacgttcgttacacggacgcgcgttcgtccattttgcagctgagct 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atacaaaaccaaagcacgttcgttacacggacgcgcgttcgtccattttgcagctgagct 258

                                                   
Query: 200 gacagaaactgctcgaccaccgaccacttaagaggagccg 239
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gacagaaactgctcgaccaccgaccacttaagaggagccg 218

>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29
          Length = 1162

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 31   ttggttcatattttacaaatcaccaagtcccagc 64
            |||| |||||| ||||||| ||||||||||||||
Sbjct: 1104 ttggatcatatattacaaaccaccaagtcccagc 1071

>gb|AY103995.1| Zea mays PCO102677 mRNA sequence
          Length = 1225

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 31   ttggttcatattttacaaatcaccaagtcccagc 64
            |||| |||||| ||||||| ||||||||||||||
Sbjct: 1153 ttggatcatatattacaaaccaccaagtcccagc 1120

>gb|AC003680.3| Arabidopsis thaliana chromosome 2 BAC F17K2 genomic sequence, complete
             sequence
          Length = 91854

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    cattggttcatattttacaaa 49
             |||||||||||||||||||||
Sbjct: 52509 cattggttcatattttacaaa 52489

>ref|XM_477163.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 267

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 158 ttcgttacacggacgcgcgttcgtccat 185
           ||||||||||||||| ||||||||||||
Sbjct: 27  ttcgttacacggacg-gcgttcgtccat 1

>gb|AY313897.1| Danio rerio ion channel NompC (nompc) mRNA, complete cds
          Length = 5533

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 200  gacagaaactgctcgaccaccgac 223
            ||||||||||||| ||||||||||
Sbjct: 4952 gacagaaactgctggaccaccgac 4929

>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    aaaccaaagcacgttcgtta 164
              ||||||||||||||||||||
Sbjct: 227818 aaaccaaagcacgttcgtta 227837

>gb|AC026101.24| Homo sapiens 3 BAC RP11-441D23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164728

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     ttcatattttacaaatcacc 54
              ||||||||||||||||||||
Sbjct: 147265 ttcatattttacaaatcacc 147246

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 158     ttcgttacacggacgcgcgttcgtccat 185
               ||||||||||||||| ||||||||||||
Sbjct: 7208546 ttcgttacacggacg-gcgttcgtccat 7208572

>ref|NM_204787.1| Gallus gallus proteoglycan (PG-M), mRNA
          Length = 12307

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 188  tgcagctgagctgacagaaactgc 211
            |||||| |||||||||||||||||
Sbjct: 7500 tgcagcagagctgacagaaactgc 7523

>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0016A21
          Length = 144076

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 158   ttcgttacacggacgcgcgttcgtccat 185
             ||||||||||||||| ||||||||||||
Sbjct: 49030 ttcgttacacggacg-gcgttcgtccat 49056

>dbj|AP000805.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-698L23, complete
             sequence
          Length = 180996

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    caccaagtcccagcagctct 70
             ||||||||||||||||||||
Sbjct: 38344 caccaagtcccagcagctct 38325

>ref|NM_183349.1| Danio rerio transient receptor potential cation channel, subfamily N,
            member 1 (trpn1), mRNA
          Length = 5533

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 200  gacagaaactgctcgaccaccgac 223
            ||||||||||||| ||||||||||
Sbjct: 4952 gacagaaactgctggaccaccgac 4929

>dbj|D13542.1|CHKPRGL Chicken mRNA for proteoglycan, complete cds
          Length = 12307

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 188  tgcagctgagctgacagaaactgc 211
            |||||| |||||||||||||||||
Sbjct: 7500 tgcagcagagctgacagaaactgc 7523


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,012,810
Number of Sequences: 3902068
Number of extensions: 2012810
Number of successful extensions: 35801
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 35773
Number of HSP's gapped (non-prelim): 31
length of query: 239
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 217
effective length of database: 17,147,199,772
effective search space: 3720942350524
effective search space used: 3720942350524
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)