ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ILL6_ARATH (Q8VYX0) IAA-amino acid hydrolase ILR1-like 6 precurs... 77 2e-14
2ILL3_ARATH (O81641) IAA-amino acid hydrolase ILR1-like 3 precurs... 63 4e-10
3ILR1_ARATH (P54968) IAA-amino acid hydrolase ILR1 precursor (EC ... 63 4e-10
4ILL2_ARATH (P54970) IAA-amino acid hydrolase ILR1-like 2 precurs... 48 1e-05
5ILL1_ARATH (P54969) IAA-amino acid hydrolase ILR1-like 1 precurs... 46 4e-05
6ILL4_ARATH (O04373) IAA-amino acid hydrolase ILR1-like 4 precurs... 44 2e-04
7ILL5_ARATH (Q9SWX9) IAA-amino acid hydrolase ILR1-like 5 precurs... 40 0.002
8YXEP_BACSU (P54955) Hypothetical protein yxeP 35 0.095
9Y4TI_RHISN (P55663) Hypothetical hydrolase y4tI (EC 3.-.-.-) 34 0.16
10HIPO_CAMJE (P45493) Hippurate hydrolase (EC 3.5.1.32) (Benzoylgl... 32 0.62
11CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22 28 8.9

>ILL6_ARATH (Q8VYX0) IAA-amino acid hydrolase ILR1-like 6 precursor (EC|
           3.5.1.-) (Protein gr1)
          Length = 464

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -1

Query: 464 GPANVRLSPQIMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVG 285
           G ++  L+PQ+M AEDF FY+E I AAF+ +G+R   E   VH  H+P  +IDE++LPVG
Sbjct: 389 GDSHFTLAPQMMGAEDFAFYSEIIPAAFYFIGIR-NEELGSVHIAHSPHFMIDEDSLPVG 447

Query: 284 AALHAGVAIEFLN-KH 240
           AA+HA VA  +LN KH
Sbjct: 448 AAVHAAVAERYLNDKH 463



to top

>ILL3_ARATH (O81641) IAA-amino acid hydrolase ILR1-like 3 precursor (EC|
           3.5.1.-)
          Length = 428

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 30/75 (40%), Positives = 45/75 (60%)
 Frame = -1

Query: 464 GPANVRLSPQIMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVG 285
           GP  V+ + ++MA EDF FY +KI   + G+G+R   E   V  VH+P   +DE  LP+G
Sbjct: 347 GPEKVKPANKVMAGEDFAFYQQKIPGYYIGIGIR-NEEIGSVRSVHSPYFFLDENVLPIG 405

Query: 284 AALHAGVAIEFLNKH 240
           +A  A +A  +L +H
Sbjct: 406 SATFAALAEMYLQEH 420



to top

>ILR1_ARATH (P54968) IAA-amino acid hydrolase ILR1 precursor (EC 3.5.1.-)|
          Length = 442

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
 Frame = -1

Query: 464 GPANVRLSPQIMAAEDFGFYAEKIXAAFFGLGVR----AGGEEDEVHHVHTPRLVIDEEA 297
           G  N    P  M  EDF F+ +K  AA F LGV+      G+      +H+P   +DEEA
Sbjct: 357 GKNNFHDFPVTMGGEDFSFFTQKTKAAIFVLGVKNETLGAGKP-----LHSPYFFVDEEA 411

Query: 296 LPVGAALHAGVAIEFLNKH 240
           LPVGAALHA +A+ +L++H
Sbjct: 412 LPVGAALHAAMAVSYLDEH 430



to top

>ILL2_ARATH (P54970) IAA-amino acid hydrolase ILR1-like 2 precursor (EC|
           3.5.1.-)
          Length = 439

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 40/64 (62%)
 Frame = -1

Query: 434 IMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVGAALHAGVAIE 255
           +M +EDF ++AE I   F  LG++   E +     H+P   I+E+ LP GAA+HA +A++
Sbjct: 364 VMGSEDFSYFAETIPGHFSLLGMQ--DETNGYASSHSPLYRINEDVLPYGAAIHASMAVQ 421

Query: 254 FLNK 243
           +L +
Sbjct: 422 YLKE 425



to top

>ILL1_ARATH (P54969) IAA-amino acid hydrolase ILR1-like 1 precursor (EC|
           3.5.1.-)
          Length = 438

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 24/61 (39%), Positives = 37/61 (60%)
 Frame = -1

Query: 431 MAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVGAALHAGVAIEF 252
           M +EDF ++AE I   F  LG++   E       H+P   I+E+ LP GAA+HA +A+++
Sbjct: 364 MGSEDFSYFAETIPGHFSLLGMQ--DETQGYASSHSPHYRINEDVLPYGAAIHATMAVQY 421

Query: 251 L 249
           L
Sbjct: 422 L 422



to top

>ILL4_ARATH (O04373) IAA-amino acid hydrolase ILR1-like 4 precursor (EC|
           3.5.1.-)
          Length = 440

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 24/68 (35%), Positives = 38/68 (55%)
 Frame = -1

Query: 452 VRLSPQIMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVGAALH 273
           V + P +M +EDF FY + I   F  +G++       +   H+P   ++EE LP GA+LH
Sbjct: 358 VEMQP-LMGSEDFSFYQQAIPGHFSFVGMQ-NKARSPMASPHSPYFEVNEELLPYGASLH 415

Query: 272 AGVAIEFL 249
           A +A  +L
Sbjct: 416 ASMATRYL 423



to top

>ILL5_ARATH (Q9SWX9) IAA-amino acid hydrolase ILR1-like 5 precursor (EC|
           3.5.1.-)
          Length = 435

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 21/62 (33%), Positives = 35/62 (56%)
 Frame = -1

Query: 434 IMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVGAALHAGVAIE 255
           +M +EDF FY + I   F  +G++       + + H+P   ++EE LP GA+L A +A  
Sbjct: 363 VMVSEDFAFYQQAIPGHFSFVGMQ-NKSHSPMANPHSPFFEVNEELLPYGASLLASLATR 421

Query: 254 FL 249
           +L
Sbjct: 422 YL 423



to top

>YXEP_BACSU (P54955) Hypothetical protein yxeP|
          Length = 380

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 22/60 (36%), Positives = 28/60 (46%)
 Frame = -1

Query: 437 QIMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVGAALHAGVAI 258
           Q    EDF  Y EKI   F  +G       +E HH   P   +DEEAL V +   A +A+
Sbjct: 320 QSPGGEDFALYQEKIPGFFVWMGTNG---TEEWHH---PAFTLDEEALTVASQYFAELAV 373



to top

>Y4TI_RHISN (P55663) Hypothetical hydrolase y4tI (EC 3.-.-.-)|
          Length = 402

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 467 AGPANVRLSPQIMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEAL 294
           AG   +     I  ++DFGFY++ I + +F  G    GE      VHTP   + ++ L
Sbjct: 327 AGSDALTQGKAISGSDDFGFYSQCIPSIYFWFG---SGEPGNESGVHTPTFAVSDDVL 381



to top

>HIPO_CAMJE (P45493) Hippurate hydrolase (EC 3.5.1.32) (Benzoylglycine|
           amidohydrolase) (Hippuricase)
          Length = 383

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 18/62 (29%), Positives = 34/62 (54%)
 Frame = -1

Query: 434 IMAAEDFGFYAEKIXAAFFGLGVRAGGEEDEVHHVHTPRLVIDEEALPVGAALHAGVAIE 255
           +MA+EDFGF+ E    A+  L      E +   ++H    V +++ L   A+ +A +A++
Sbjct: 327 LMASEDFGFFCEMKKCAYAFL------ENENDIYLHNSSYVFNDKLLARAASYYAKLALK 380

Query: 254 FL 249
           +L
Sbjct: 381 YL 382



to top

>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 188 SRAPTRPREATP*HKHARACSRTRWPHRRAGRLQRGAPPR-----RSPDAA 325
           SR+PT PR   P  +  R  S T     R+    R   PR     RSPD A
Sbjct: 744 SRSPTPPRRQAPAQQRGRQRSYTPSDRSRSRSYSRSRSPRGRSYTRSPDRA 794


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,049,864
Number of Sequences: 219361
Number of extensions: 810301
Number of successful extensions: 2197
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top