Clone Name | rbaet95h02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | S17P_WHEAT (P46285) Sedoheptulose-1,7-bisphosphatase, chloroplas... | 52 | 3e-07 | 2 | S17P_ARATH (P46283) Sedoheptulose-1,7-bisphosphatase, chloroplas... | 51 | 7e-07 | 3 | S17P_SPIOL (O20252) Sedoheptulose-1,7-bisphosphatase, chloroplas... | 48 | 6e-06 | 4 | S17P_CHLRE (P46284) Sedoheptulose-1,7-bisphosphatase, chloroplas... | 34 | 0.11 | 5 | PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b... | 28 | 7.9 |
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>S17P_WHEAT (P46285) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 393 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = -3 Query: 280 RTQVAYGSKNEIIRFEETLYGSSRL 206 RTQVAYGSKNEIIRFEETLYGSSRL Sbjct: 359 RTQVAYGSKNEIIRFEETLYGSSRL 383
>S17P_ARATH (P46283) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 393 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/25 (96%), Positives = 25/25 (100%) Frame = -3 Query: 280 RTQVAYGSKNEIIRFEETLYGSSRL 206 RTQVAYGSKNEIIRFEETLYG+SRL Sbjct: 360 RTQVAYGSKNEIIRFEETLYGTSRL 384
>S17P_SPIOL (O20252) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 387 Score = 48.1 bits (113), Expect = 6e-06 Identities = 23/25 (92%), Positives = 24/25 (96%) Frame = -3 Query: 280 RTQVAYGSKNEIIRFEETLYGSSRL 206 RTQVAYGS NEIIRFE+TLYGSSRL Sbjct: 353 RTQVAYGSLNEIIRFEKTLYGSSRL 377
>S17P_CHLRE (P46284) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 389 Score = 33.9 bits (76), Expect = 0.11 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 280 RTQVAYGSKNEIIRFEETLYGSS 212 RTQ+ YGS E+ RFEE +YG+S Sbjct: 358 RTQICYGSIGEVRRFEEYMYGTS 380
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 27.7 bits (60), Expect = 7.9 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 37 SARPLYYQFASSQDNNNNNSMLQ 105 + RPL +A+ +DNNNNN+ Q Sbjct: 228 NGRPLRINWAAKRDNNNNNNYQQ 250 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,037,760 Number of Sequences: 219361 Number of extensions: 346070 Number of successful extensions: 646 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 622 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 642 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)