ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95h02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X65540.1|TASH17BP T.aestivum gene for sedoheptulose-1,7-bisphoshatase Length = 3143 Score = 204 bits (103), Expect = 1e-49 Identities = 112/115 (97%) Strand = Plus / Minus Query: 168 gattatcaggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagg 227 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2761 gattattaggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtagagg 2702 Query: 228 gtctcctcgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2701 gtctcctcgaagcggatgatctcgttcttggagccgtaggccacctgggtccgct 2647 Score = 65.9 bits (33), Expect = 6e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 95 gcatgcttcaaactctataacggacagcttgttttaaccttcaggttga 143 |||||||||| ||||||||||||||||||||||| || |||||||||| Sbjct: 2838 gcatgcttcagactctataacggacagcttgtttaaattttcaggttga 2790 Score = 60.0 bits (30), Expect = 4e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 1 ggagacaagggcggcagacgtacgcaagcc 30 |||||||||||||||||||||||||||||| Sbjct: 2912 ggagacaagggcggcagacgtacgcaagcc 2883
>gb|AY105080.1| Zea mays PCO078556 mRNA sequence Length = 817 Score = 137 bits (69), Expect = 2e-29 Identities = 87/93 (93%) Strand = Plus / Minus Query: 190 cggtggcgctggcggcgagtctggaggagccgtaaagggtctcctcgaagcggatgatct 249 ||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 603 cggtggcgctggcggcgagcctggacgagccgtagagggtctcctcgaaccggatgatct 544 Query: 250 cgttcttggagccgtaagccacctgggtccgct 282 |||||||||| ||||| |||||||||||||||| Sbjct: 543 cgttcttggacccgtaggccacctgggtccgct 511
>ref|XM_475043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 1177 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 1118 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 1117 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 1070
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 118147 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 118206 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 118207 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 118254
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 9033413 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 9033472 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 9033473 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 9033520
>gb|AY188798.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, gene, complete cds; nuclear gene for chloroplast product Length = 2594 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 2379 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 2320 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 2319 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 2272
>gb|AY188797.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1566 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 1327 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 1268 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 1267 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 1220
>dbj|AK119209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E03, full insert sequence Length = 1605 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 1393 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 1334 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 1333 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 1286
>dbj|AK065773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M24, full insert sequence Length = 1541 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 1238 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 1179 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 1178 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 1131
>dbj|AK062081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F10, full insert sequence Length = 1454 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcgagtctggaggagccgtaaagggtctcct 234 |||||| |||||| |||||||||| ||||| ||| || || |||||||| || ||||||| Sbjct: 1305 aggcggcggcgcccacggtggcgccggcggtgagcctcgacgagccgtagagagtctcct 1246 Query: 235 cgaagcggatgatctcgttcttggagccgtaagccacctgggtccgct 282 |||| |||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 1245 cgaaccggatgatctcgttcttggaaccgtaggccacttgagtccgct 1198
>ref|NM_115438.3| Arabidopsis thaliana SBPASE; phosphoric ester hydrolase AT3G55800 (SBPASE) mRNA, complete cds Length = 1655 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 222 taaagggtctcctcgaagcggatgatctcgttcttggagccgtaagc 268 |||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 1390 taaagggtttcttcgaagcggatgatctcgttctttgagccataagc 1344
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 222 taaagggtctcctcgaagcggatgatctcgttcttggagccgtaagc 268 |||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 99463 taaagggtttcttcgaagcggatgatctcgttctttgagccataagc 99417
>gb|AY128737.1| Arabidopsis thaliana sedoheptulose-bisphosphatase precursor (At3g55800) mRNA, complete cds Length = 1245 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 222 taaagggtctcctcgaagcggatgatctcgttcttggagccgtaagc 268 |||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 1136 taaagggtttcttcgaagcggatgatctcgttctttgagccataagc 1090
>gb|S74719.1| sedoheptulose-1,7-bisphosphatase [Arabidopsis thaliana, C24, Genomic, 2747 nt] Length = 2747 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 222 taaagggtctcctcgaagcggatgatctcgttcttggagccgtaagc 268 |||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 2552 taaagggtttcttcgaagcggatgatctcgttctttgagccataagc 2506
>gb|AY054669.1| Arabidopsis thaliana sedoheptulose-bisphosphatase precursor (At3g55800; F1I16_210) mRNA, complete cds Length = 1327 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 222 taaagggtctcctcgaagcggatgatctcgttcttggagccgtaagc 268 |||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 1182 taaagggtttcttcgaagcggatgatctcgttctttgagccataagc 1136
>emb|BX825749.1|CNS0A59I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 222 taaagggtctcctcgaagcggatgatctcgttcttggagccgtaagc 268 |||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 1299 taaagggtttcttcgaagcggatgatctcgttctttgagccataagc 1253
>gb|L76556.1|SPIS17B Spinacia oleracea chloroplast sedoheptulose-1,7-bisphosphatase mRNA, complete cds Length = 1416 Score = 50.1 bits (25), Expect = 0.004 Identities = 55/65 (84%) Strand = Plus / Minus Query: 213 gaggagccgtaaagggtctcctcgaagcggatgatctcgttcttggagccgtaagccacc 272 ||||| ||||| || |||| ||| || ||||||||||||||| |||||||||||| || Sbjct: 1165 gaggatccgtatagtgtcttctcaaatcggatgatctcgttcaaggagccgtaagcaact 1106 Query: 273 tgggt 277 ||||| Sbjct: 1105 tgggt 1101
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 cgacggtggcgctggcggcgag 208 |||||||||||||||||||||| Sbjct: 55309 cgacggtggcgctggcggcgag 55288
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11, complete sequence Length = 199348 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 caggcggtggcgccgacggtgg 195 |||||||||||||||||||||| Sbjct: 132436 caggcggtggcgccgacggtgg 132457
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 cgacggtggcgctggcggcgag 208 |||||||||||||||||||||| Sbjct: 26354007 cgacggtggcgctggcggcgag 26353986 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 caggcggtggcgccgacggtgg 195 |||||||||||||||||||||| Sbjct: 25003388 caggcggtggcgccgacggtgg 25003409
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 agcccggccgtccgcccgcccg 48 |||||||||||||||||||||| Sbjct: 2764296 agcccggccgtccgcccgcccg 2764275 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ggcggtggcgccgacggtggcgct 199 |||||||||| ||||||||||||| Sbjct: 6101413 ggcggtggcgacgacggtggcgct 6101436
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 cgacggtggcgctggcggcgag 208 |||||||||||||||||||||| Sbjct: 26667735 cgacggtggcgctggcggcgag 26667714 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 caggcggtggcgccgacggtgg 195 |||||||||||||||||||||| Sbjct: 25314978 caggcggtggcgccgacggtgg 25314999
>ref|XM_481667.1| Oryza sativa (japonica cultivar-group), mRNA Length = 309 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 ggcggtggcgccgacggtggcgctggcgg 204 ||||||||||| | ||||||||||||||| Sbjct: 61 ggcggtggcgctggcggtggcgctggcgg 89
>ref|XM_477843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aggcggtggcgccgacggtggcgctggcg 203 ||||||||||| |||||||||||| |||| Sbjct: 65 aggcggtggcggcgacggtggcgcgggcg 93
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgacggtggcgctggcggcg 206 ||||||||||||||||||||| Sbjct: 9006 ccgacggtggcgctggcggcg 9026
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gcggtggcgccgacggtggcg 197 ||||||||||||||||||||| Sbjct: 3852271 gcggtggcgccgacggtggcg 3852251
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 ggcggtggcgccgacggtggcgctggcgg 204 ||||||||||| | ||||||||||||||| Sbjct: 14582149 ggcggtggcgctggcggtggcgctggcgg 14582177
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aggcggtggcgccgacggtggcgctggcg 203 ||||||||||| |||||||||||| |||| Sbjct: 14776818 aggcggtggcggcgacggtggcgcgggcg 14776846 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggtggcgccgacggtggcg 197 |||||||||||||||||||| Sbjct: 837446 cggtggcgccgacggtggcg 837427
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aggcggtggcgccgacggtggcgctggcg 203 ||||||||||| |||||||||||| |||| Sbjct: 101585 aggcggtggcggcgacggtggcgcgggcg 101613
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cgaagcggatgatctcgttct 255 ||||||||||||||||||||| Sbjct: 7850236 cgaagcggatgatctcgttct 7850216
>dbj|AP005447.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0035G02 Length = 159802 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aggcggtggcgccgacggtggcgctggcg 203 ||||||||||| |||||||||||| |||| Sbjct: 16423 aggcggtggcggcgacggtggcgcgggcg 16451
>dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0474F07 Length = 136440 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 ggcggtggcgccgacggtggcgctggcgg 204 ||||||||||| | ||||||||||||||| Sbjct: 19853 ggcggtggcgctggcggtggcgctggcgg 19881
>dbj|AP004652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0002F11 Length = 135446 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 ggcggtggcgccgacggtggcgctggcgg 204 ||||||||||| | ||||||||||||||| Sbjct: 85623 ggcggtggcgctggcggtggcgctggcgg 85651
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 cggtggcgccgacggtggcgctggc 202 ||||||||||| ||||||||||||| Sbjct: 4754448 cggtggcgccggcggtggcgctggc 4754424
>ref|NM_190405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtggcgccgacggtggcgct 199 |||||||||||||||||||| Sbjct: 208 gtggcgccgacggtggcgct 227
>ref|NM_194141.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1601 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggtggcgccgacggtggcg 197 |||||||||||||||||||| Sbjct: 377 cggtggcgccgacggtggcg 358
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cccggccgtccgcccgcccg 48 |||||||||||||||||||| Sbjct: 81929 cccggccgtccgcccgcccg 81948
>gb|AY498874.1| Streptomyces lavendulae linear plasmid pSLV45 SLV.1 (SLV.1), SLV.1B (SLV.1B), SLV.2 (SLV.2), SLV.3 (SLV.3), SLV.4 (SLV.4), SLV.5 (SLV.5), SLV.6 (SLV.6), SLV.7, SLV.8, SLV.9 (SLV.9), SLV.10 (SLV.10), SLV.11 (SLV.11), SLV.12 (SLV.12), SLV.13 (SLV.13), SLV.14 (SLV.14), SLV.15 (SLV.15), SLV.16 (SLV.16), SLV.17 (SLV.17), SLV.18 (SLV.18), RegA (regA), TraSLVA (traSLVA), SLV.21 (SLV.21), ParSLV (parSLV), SLV.23 (SLV.23), SLV.24 (SLV.24), TpgSLV (tpgSLV), SLV.26 (SLV.26), SLV.27 (SLV.27), TraSLVB (traSLVB), SLV.29 (SLV.29), SLV.30 (SLV.30), TraSLR, SLV.32 (SLV.32), SLV.33 (SLV.33), SLV.34 (SLV.34), SLV.35 (SLV.35), SLV.36 (SLV.36), and SLV.37 (SLV.37) genes, complete cds Length = 41987 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cggtggcgccgacggtggcgctgg 201 ||||||||||||||||||| |||| Sbjct: 33500 cggtggcgccgacggtggctctgg 33477
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 230 ctcctcgaagcggatgatctcgttcttg 257 |||| ||||||||||| ||||||||||| Sbjct: 3247079 ctccgcgaagcggatgttctcgttcttg 3247106
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgccgacggtggcgctggcggcga 207 |||||||||||||||||| ||||| Sbjct: 1314660 cgccgacggtggcgctggtggcga 1314683
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tgatctcgttcttggagccg 263 |||||||||||||||||||| Sbjct: 135256 tgatctcgttcttggagccg 135275
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gacggtggcgctggcggcga 207 |||||||||||||||||||| Sbjct: 1814823 gacggtggcgctggcggcga 1814804
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcg 206 ||||||||||| ||||||| |||| ||||||| Sbjct: 38642 aggcggtggcggcgacggttgcgcgggcggcg 38611
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcg 206 ||||||||||| ||||||| |||| ||||||| Sbjct: 130175 aggcggtggcggcgacggttgcgcgggcggcg 130144
>dbj|AK054043.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230014G11 product:hypothetical protein, full insert sequence Length = 743 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ccggccgtccgcccgcccgc 49 |||||||||||||||||||| Sbjct: 363 ccggccgtccgcccgcccgc 344
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcg 206 ||||||||||| ||||||| |||| ||||||| Sbjct: 2473443 aggcggtggcggcgacggttgcgcgggcggcg 2473412
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 174 caggcggtggcgccgacggtggcgctggcggc 205 |||||||||||| |||||| ||||| |||||| Sbjct: 850183 caggcggtggcggcgacggcggcgcgggcggc 850214
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtggcgccgacggtggcgct 199 |||||||||||||||||||| Sbjct: 35316212 gtggcgccgacggtggcgct 35316193
>gb|AF321057.1|AF321057 Cucumber fruit mottle mosaic virus, complete genome Length = 6562 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 agcggatgatctcgttcttg 257 |||||||||||||||||||| Sbjct: 1604 agcggatgatctcgttcttg 1623
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgacggtggcgctggcggcg 206 |||||||||||||||||||| Sbjct: 2017577 cgacggtggcgctggcggcg 2017558
>gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 from chromosome unknown, complete sequence Length = 183178 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ccggccgtccgcccgcccgc 49 |||||||||||||||||||| Sbjct: 14231 ccggccgtccgcccgcccgc 14250
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gtggcgccgacggtggcgct 199 |||||||||||||||||||| Sbjct: 80073 gtggcgccgacggtggcgct 80054
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 174 caggcggtggcgccgacggtggcgctggcggc 205 |||||||||||| |||||| ||||| |||||| Sbjct: 133317 caggcggtggcggcgacggcggcgcgggcggc 133348
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 174 caggcggtggcgccgacggtggcgctggcggc 205 |||||||||||| |||||| ||||| |||||| Sbjct: 31078 caggcggtggcggcgacggcggcgcgggcggc 31109
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tggcgccgacggtggcgctg 200 |||||||||||||||||||| Sbjct: 3493284 tggcgccgacggtggcgctg 3493303 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ggcggtggcgccgacggtgg 195 |||||||||||||||||||| Sbjct: 115654 ggcggtggcgccgacggtgg 115635
>dbj|AK108096.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A08, full insert sequence Length = 1294 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 174 caggcggtggcgccgacggtggcgctggcggc 205 |||||||||||| |||||| ||||| |||||| Sbjct: 286 caggcggtggcggcgacggcggcgcgggcggc 317
>dbj|AK061511.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G05, full insert sequence Length = 1602 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggtggcgccgacggtggcg 197 |||||||||||||||||||| Sbjct: 377 cggtggcgccgacggtggcg 358
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1138_B05 Length = 113982 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggtggcgccgacggtggcg 197 |||||||||||||||||||| Sbjct: 36202 cggtggcgccgacggtggcg 36183
>tpe|BN000627.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx98 gene for class III peroxidase 98 precursor, exons 1-3 Length = 2641 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cggtggcgccgacggtggcg 197 |||||||||||||||||||| Sbjct: 199 cggtggcgccgacggtggcg 180
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 gcgccgacggtggcgctggcggcg 206 |||||||||| ||||||||||||| Sbjct: 444008 gcgccgacggcggcgctggcggcg 443985
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 175 aggcggtggcgccgacggtggcgctggcggcg 206 ||||||||||| ||||||| |||| ||||||| Sbjct: 2473394 aggcggtggcggcgacggttgcgcgggcggcg 2473363
>emb|AL837521.6| Mouse DNA sequence from clone RP23-28I8 on chromosome 4, complete sequence Length = 230493 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ccggccgtccgcccgcccgc 49 |||||||||||||||||||| Sbjct: 90603 ccggccgtccgcccgcccgc 90584 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,371,990 Number of Sequences: 3902068 Number of extensions: 1371990 Number of successful extensions: 24998 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24014 Number of HSP's gapped (non-prelim): 980 length of query: 282 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 260 effective length of database: 17,147,199,772 effective search space: 4458271940720 effective search space used: 4458271940720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
