Clone Name | rbaet95g12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MUA3_CAEEL (P34576) Transmembrane cell adhesion receptor mua-3 p... | 28 | 5.2 | 2 | UL16_VZVD (P09293) Gene 44 protein | 28 | 6.8 |
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>MUA3_CAEEL (P34576) Transmembrane cell adhesion receptor mua-3 precursor (Muscle| attachment abnormal protein 3) Length = 3767 Score = 28.5 bits (62), Expect = 5.2 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -1 Query: 91 TVCNICLISFCSSCVCFSLIRFATA 17 T+C CL+ FC+ C CF RFA A Sbjct: 3431 TLC--CLLYFCTKCHCFKGRRFAGA 3453
>UL16_VZVD (P09293) Gene 44 protein| Length = 363 Score = 28.1 bits (61), Expect = 6.8 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +2 Query: 98 VTRSKQKNLPPAPFHII 148 +TR +Q NLPP FH+I Sbjct: 82 ITRPRQMNLPPKTFHVI 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.129 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,356,323 Number of Sequences: 219361 Number of extensions: 365898 Number of successful extensions: 1340 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1326 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1337 length of database: 80,573,946 effective HSP length: 34 effective length of database: 73,115,672 effective search space used: 1754776128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)