Clone Name | rbaet95g09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HCYG_SEPOF (P56826) Haemocyanin, units G and H (Fragments) | 28 | 5.5 | 2 | SPON1_RAT (P35446) Spondin-1 precursor (F-spondin) | 28 | 5.5 | 3 | SPON1_MOUSE (Q8VCC9) Spondin-1 precursor (F-spondin) | 28 | 5.5 | 4 | SPON1_HUMAN (Q9HCB6) Spondin-1 precursor (F-spondin) (Vascular s... | 28 | 5.5 | 5 | SPON1_XENLA (P35447) Spondin-1 precursor (F-spondin) | 28 | 7.2 |
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>HCYG_SEPOF (P56826) Haemocyanin, units G and H (Fragments)| Length = 560 Score = 28.1 bits (61), Expect = 5.5 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +3 Query: 108 TPASCQLACCLHGLP 152 TP + Q ACCLHG+P Sbjct: 3 TPDAPQYACCLHGMP 17
>SPON1_RAT (P35446) Spondin-1 precursor (F-spondin)| Length = 807 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 80 TEQVGKCSLYSCILSACMLSPWASSDVWS 166 T Q KC + C C+LSPW+ WS Sbjct: 599 TSQAEKCMMPECHTIPCLLSPWSE---WS 624
>SPON1_MOUSE (Q8VCC9) Spondin-1 precursor (F-spondin)| Length = 807 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 80 TEQVGKCSLYSCILSACMLSPWASSDVWS 166 T Q KC + C C+LSPW+ WS Sbjct: 599 TSQAEKCMMPECHTIPCLLSPWSE---WS 624
>SPON1_HUMAN (Q9HCB6) Spondin-1 precursor (F-spondin) (Vascular smooth muscle| cell growth-promoting factor) Length = 807 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 80 TEQVGKCSLYSCILSACMLSPWASSDVWS 166 T Q KC + C C+LSPW+ WS Sbjct: 599 TSQAEKCMMPECHTIPCLLSPWSE---WS 624
>SPON1_XENLA (P35447) Spondin-1 precursor (F-spondin)| Length = 803 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 80 TEQVGKCSLYSCILSACMLSPWASSDVWS 166 T +V KC + C C+LSPW+ WS Sbjct: 593 TTEVEKCMMPECHTIPCVLSPWSE---WS 618 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,542,273 Number of Sequences: 219361 Number of extensions: 538698 Number of successful extensions: 1323 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1285 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1322 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)