Clone Name	rbaet95g09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|CR626932.1| Triticum turgidum	115	1e-22
2	emb|CR626930.1| Triticum aestivum	115	1e-22
3	emb|CR626933.1| Triticum turgidum	100	6e-18
4	emb|CR626929.1| Triticum aestivum	100	6e-18
5	gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones B...	92	1e-15
6	emb|CR626934.1| Triticum aestivum	64	3e-07
7	emb|AL117379.14|HSJ563E14 Human DNA sequence from clone RP4-563E...	44	0.31
8	gb|AC161470.3| Gallus gallus BAC clone CH261-85J8 from chromosom...	44	0.31
9	gb|AC113931.2| Homo sapiens chromosome 16 clone CTD-2330P21, com...	44	0.31
10	gb|AC087188.5| Homo sapiens chromosome 16 clone RP11-345M22, com...	44	0.31
11	ref|XM_864892.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
12	ref|XM_874434.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
13	ref|XM_874351.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
14	ref|XM_874094.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
15	ref|XM_873812.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
16	ref|XM_873623.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
17	ref|XM_873527.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
18	ref|XM_873122.1| PREDICTED: Bos taurus similar to Polycomb prote...	42	1.2
19	gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome...	42	1.2
20	ref|NM_001031694.1| Homo sapiens sex comb on midleg homolog 1 (D...	42	1.2
21	gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complet...	42	1.2
22	gb|BC009752.2| Homo sapiens sex comb on midleg homolog 1 (Drosop...	42	1.2
23	emb|AL353580.7| Human DNA sequence from clone RP11-248N6 on chro...	42	1.2
24	gb|AC148335.4| Mus musculus BAC clone RP23-103H10 from chromosom...	42	1.2
25	gb|AC007068.17| Homo sapiens 12p BAC RPCI11-75L1 (Roswell Park C...	42	1.2
26	emb|BX005236.16| Mouse DNA sequence from clone RP23-254A23 on ch...	42	1.2
27	gb|AC023058.17|AC023058 Homo sapiens 3 BAC CTB-187G23 (CalTech H...	42	1.2
28	gb|AC074047.6|AC074047 Mus musculus 7 BAC RP23-377F9 (Roswell Pa...	42	1.2
29	gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, comp...	42	1.2
30	emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chrom...	42	1.2
31	gb|CP000081.1| Leishmania major chromosome 35, complete sequence	40	4.8
32	gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, com...	40	4.8
33	gb|AY679728.1| Rattus norvegicus strain BN/SsNHsd cyclin-depende...	40	4.8
34	gb|AY679727.1| Rattus norvegicus strain BN/SsNHsd cyclin-depende...	40	4.8
35	gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, com...	40	4.8
36	ref|XM_874594.1| PREDICTED: Bos taurus similar to Polycomb prote...	40	4.8
37	ref|XM_874270.1| PREDICTED: Bos taurus similar to Polycomb prote...	40	4.8
38	ref|XM_873718.1| PREDICTED: Bos taurus similar to Polycomb prote...	40	4.8
39	ref|XM_873323.1| PREDICTED: Bos taurus similar to Polycomb prote...	40	4.8
40	ref|XM_873225.1| PREDICTED: Bos taurus similar to Polycomb prote...	40	4.8
41	ref|XM_415903.1| PREDICTED: Gallus gallus similar to AP1 gamma s...	40	4.8
42	gb|AC122528.3| Mus musculus BAC clone RP24-506F15 from chromosom...	40	4.8
43	gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosom...	40	4.8
44	gb|BT013831.1| Lycopersicon esculentum clone 132788F, mRNA sequence	40	4.8
45	ref|NM_031550.1| Rattus norvegicus cyclin-dependent kinase inhib...	40	4.8
46	ref|NM_012236.1| Homo sapiens sex comb on midleg homolog 1 (Dros...	40	4.8
47	ref|XM_838083.1| Leishmania major strain Friedlin hypothetical p...	40	4.8
48	ref|XM_752318.1| Ustilago maydis 521 hypothetical protein (UM012...	40	4.8
49	gb|AY319391.1| Oncorhynchus mykiss Na/K ATPase alpha subunit iso...	40	4.8
50	gb|AC027119.5| Homo sapiens chromosome 3 clone RP11-113L10 map 3...	40	4.8
51	gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, c...	40	4.8
52	ref|XM_661426.1| Cryptosporidium hominis TU502 hypothetical prot...	40	4.8
53	emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chro...	40	4.8
54	gb|AC147712.17| Medicago truncatula clone mth2-34f1, complete se...	40	4.8
55	emb|AL583862.35| Human DNA sequence from clone RP11-506B15 on ch...	40	4.8
56	emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chr...	40	4.8
57	emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chr...	40	4.8
58	emb|AL109835.13|HSA151N12 Human DNA sequence from clone RP11-151...	40	4.8
59	emb|AL110502.1|HSDJ635E8 Human DNA sequence from clone RP4-635E8...	40	4.8
60	ref|NM_001024523.1| Bos taurus guanine nucleotide binding protei...	40	4.8
61	ref|XM_787071.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	4.8
62	emb|AL669858.8| Mouse DNA sequence from clone RP23-51G7 on chrom...	40	4.8
63	emb|BX511252.17| Zebrafish DNA sequence from clone CH211-240E14 ...	40	4.8
64	emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in l...	40	4.8
65	gb|AF474975.1| Rattus norvegicus strain COP cyclin-dependent kin...	40	4.8
66	gb|AF474974.1| Rattus norvegicus strain ACI/SegHsd cyclin-depend...	40	4.8
67	gb|AF474977.1| Rattus norvegicus strain COP cyclin-dependent kin...	40	4.8
68	gb|AF474976.1| Rattus norvegicus strain ACI/SegHsd cyclin-depend...	40	4.8
69	ref|XM_626977.1| Cryptosporidium parvum Iowa II putative amino a...	40	4.8
70	gb|BC102674.1| Bos taurus guanine nucleotide binding protein (G ...	40	4.8
71	gb|AC022416.5|AC022416 Homo sapiens chromosome 5 clone CTC-489P2...	40	4.8
72	gb|AC126471.4| Homo sapiens 12 BAC RP11-629O19 (Roswell Park Can...	40	4.8
73	ref|XM_579513.1| PREDICTED: Rattus norvegicus hypothetical gene ...	40	4.8
74	emb|BX322651.3| Zebrafish DNA sequence from clone DKEYP-32G10, c...	40	4.8
75	emb|AL824713.9| Mouse DNA sequence from clone RP23-191F15 on chr...	40	4.8
76	gb|AF149046.1|AF149046 Homo sapiens Sex comb on midleg homolog 1...	40	4.8
77	gb|AF149045.1|AF149045 Homo sapiens Sex comb on midleg homolog 1...	40	4.8
78	gb|AC151590.2| Nematostella vectensis clone JGIAFIN-297A6, compl...	40	4.8
79	gb|AY940097.1| Homo sapiens X-ray repair complementing defective...	40	4.8
80	gb|L81167.1|L81167 Rattus norvegicus p16 protein (P16INK4a) mRNA...	40	4.8
81	gb|BT020970.1| Bos taurus guanine nucleotide binding protein (G ...	40	4.8
82	dbj|AP002765.3| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	4.8
83	dbj|AK112308.1| Ciona intestinalis cDNA, clone:ciad015e10, full ...	40	4.8
84	gb|AY610232.1| Sus scrofa clone rpbfe0102_o5.y1.abd, mRNA sequence	40	4.8
85	gb|AC122515.5| Mus musculus BAC clone RP24-455N18 from 9, comple...	40	4.8

---

>emb|CR626932.1| Triticum turgidum
          Length = 19229

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                         
Query: 250   cttggctttctttgcttcagcatccttggcctccttttcttgcatggccttggctgctgc 309
             |||||||||||| |||||||| ||||||||||||| ||| | | | ||||| || |||||
Sbjct: 12106 cttggctttcttcgcttcagcctccttggcctcctcttcctccttagcctttgccgctgc 12165

                                                               
Query: 310   tgcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
              |||||||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 12166 cgcgtcttccttggcctgcttgagcaccttgatgaggcctgccaagcaca 12215



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 302   gctgctgctgcgtcttctttggcctgcttgagcgcctggatgaggcctg 350
             |||||||| ||| |||| ||||||||||||||||||| || ||||||||
Sbjct: 17827 gctgctgccgcgccttccttggcctgcttgagcgcctcgacgaggcctg 17875



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 311  gcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
            |||||||  |||||||| |||||||||  ||||||||||||||||||||
Sbjct: 5684 gcgtctttcttggcctgtttgagcgccgcgatgaggcctgccaagcaca 5636



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 172   ttcctctttctccttggctttcttcacttgagcctcctttttctccttggc 222
             ||||||||||||||||| ||||||  |||  ||||||| || |||||||||
Sbjct: 14423 ttcctctttctccttggatttctttgcttctgcctcctcttcctccttggc 14473



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 173   tcctctttctccttggctttcttcacttgagcctcctt 210
             |||| ||| ||||||||||||||| ||| |||||||||
Sbjct: 12095 tcctttttatccttggctttcttcgcttcagcctcctt 12132



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 204   cctcctttttctccttggctgtattcacttcagcctcc 241
             |||||||||| ||||||||| | ||| |||||||||||
Sbjct: 12093 cctcctttttatccttggctttcttcgcttcagcctcc 12130



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 172  ttcctctttctccttggctttctt 195
            ||||||||||||||||| ||||||
Sbjct: 5760 ttcctctttctccttggttttctt 5737

---

>emb|CR626930.1| Triticum aestivum
          Length = 19274

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                         
Query: 250   cttggctttctttgcttcagcatccttggcctccttttcttgcatggccttggctgctgc 309
             |||||||||||| |||||||| ||||||||||||| ||| | | | ||||| || |||||
Sbjct: 12104 cttggctttcttcgcttcagcctccttggcctcctcttcctccttagcctttgccgctgc 12163

                                                               
Query: 310   tgcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
              |||||||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 12164 cgcgtcttccttggcctgcttgagcaccttgatgaggcctgccaagcaca 12213



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 302   gctgctgctgcgtcttctttggcctgcttgagcgcctggatgaggcctg 350
             |||||||| ||| |||| ||||||||||||||||||| || ||||||||
Sbjct: 17872 gctgctgccgcgccttccttggcctgcttgagcgcctcgacgaggcctg 17920



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 311  gcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
            |||||||  |||||||| |||||||||  ||||||||||||||||||||
Sbjct: 5684 gcgtctttcttggcctgtttgagcgccgcgatgaggcctgccaagcaca 5636



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 172   ttcctctttctccttggctttcttcacttgagcctcctttttctccttggc 222
             ||||||||||||||||| ||||||  |||  ||||||| || |||||||||
Sbjct: 14452 ttcctctttctccttggatttctttgcttctgcctcctcttcctccttggc 14502



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 173   tcctctttctccttggctttcttcacttgagcctcctt 210
             |||| ||| ||||||||||||||| ||| |||||||||
Sbjct: 12093 tcctttttatccttggctttcttcgcttcagcctcctt 12130



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 204   cctcctttttctccttggctgtattcacttcagcctcc 241
             |||||||||| ||||||||| | ||| |||||||||||
Sbjct: 12091 cctcctttttatccttggctttcttcgcttcagcctcc 12128



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 172  ttcctctttctccttggctttctt 195
            ||||||||||||||||| ||||||
Sbjct: 5760 ttcctctttctccttggttttctt 5737

---

>emb|CR626933.1| Triticum turgidum
          Length = 25216

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                         
Query: 250   cttggctttctttgcttcagcatccttggcctccttttcttgcatggccttggctgctgc 309
             ||||||||||||  ||||||| ||||||||||||| ||| | | | ||||| || ||| |
Sbjct: 12142 cttggctttcttcacttcagcctccttggcctcctcttcctccttcgcctttgccgctcc 12201

                                                               
Query: 310   tgcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
             |||||| || ||||||||||||||||||| |||||| |||||||||||||
Sbjct: 12202 tgcgtcctccttggcctgcttgagcgcctcgatgagtcctgccaagcaca 12251



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                         
Query: 217   cttggctgtattcacttcagcctccagtttttgcttggctttctttgcttcagcatcctt 276
             ||||||| | ||||| || ||||||  ||| | ||||||||||||||||||||| |||||
Sbjct: 23720 cttggctttcttcacctccgcctcctctttctccttggctttctttgcttcagcctcctt 23779

                                                 
Query: 277   ggcctccttttcttgcatggccttggctgctgctgc 312
             |||||| | ||| | | | |||||||||||||||||
Sbjct: 23780 ggcctcttcttcctccttcgccttggctgctgctgc 23815



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                         
Query: 135   tgtctccatgggcttcctctgatgtttggtctttgccttcctctttctccttggctttct 194
             ||||||||| ||||||||||| || || ||| || ||||  | || || |||||||||||
Sbjct: 23671 tgtctccattggcttcctctgctgctttgtccttccctttgttttccttcttggctttct 23730

                                                            
Query: 195   tcacttgagcctcctttttctccttggctgtattcacttcagcctcc 241
             |||| |  ||||||| ||||||||||||| | ||  |||||||||||
Sbjct: 23731 tcacctccgcctcctctttctccttggctttctttgcttcagcctcc 23777



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 180   tctccttggctttcttcacttgagcctcctt 210
             ||||||||||||||||||||| |||||||||
Sbjct: 12138 tctccttggctttcttcacttcagcctcctt 12168



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 173   tcctctttctccttggctttcttcacttgagcctcctt 210
             |||||||||||||||||||||||  ||| |||||||||
Sbjct: 23742 tcctctttctccttggctttctttgcttcagcctcctt 23779



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 204   cctcctttttctccttggctgtattcacttcagcctcc 241
             |||||||| ||||||||||| | |||||||||||||||
Sbjct: 12129 cctcctttatctccttggctttcttcacttcagcctcc 12166



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 311   gcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
             |||||||  |||||||| |||||||||   |||||||||||||||||||
Sbjct: 14499 gcgtctttcttggcctgtttgagcgccgcaatgaggcctgccaagcaca 14547



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 172   ttcctctttctccttggctttctt 195
             ||||||||||||||||||||||||
Sbjct: 14423 ttcctctttctccttggctttctt 14446



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 135   tgtctccatgggcttcctctgatgtttggtctttgccttcctctttct 182
             ||||||| | |||| |||||||||||| ||| || ||||| |||||||
Sbjct: 12072 tgtctccgttggctacctctgatgttttgtccttcccttcgtctttct 12119

---

>emb|CR626929.1| Triticum aestivum
          Length = 20745

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                         
Query: 250   cttggctttctttgcttcagcatccttggcctccttttcttgcatggccttggctgctgc 309
             ||||||||||||  ||||||| ||||||||||||| ||| | | | ||||| || ||| |
Sbjct: 14860 cttggctttcttcacttcagcctccttggcctcctcttcctccttcgcctttgccgctcc 14919

                                                               
Query: 310   tgcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
             |||||| || ||||||||||||||||||| |||||| |||||||||||||
Sbjct: 14920 tgcgtcctccttggcctgcttgagcgcctcgatgagtcctgccaagcaca 14969



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 180   tctccttggctttcttcacttgagcctcctt 210
             ||||||||||||||||||||| |||||||||
Sbjct: 14856 tctccttggctttcttcacttcagcctcctt 14886



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 204   cctcctttttctccttggctgtattcacttcagcctcc 241
             |||||||| ||||||||||| | |||||||||||||||
Sbjct: 14847 cctcctttatctccttggctttcttcacttcagcctcc 14884



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                         
Query: 135   tgtctccatgggcttcctctgatgtttggtctttgccttcctctttctccttggctttct 194
             ||||||||| ||||||||||| || || ||| || ||||  | || ||||||||||||||
Sbjct: 19370 tgtctccattggcttcctctgctgctttgtccttccctttgttttcctccttggctttct 19429

                                          
Query: 195   tcacttgagcctcctttttctccttggct 223
             ||||    ||||| | |||||||||||||
Sbjct: 19430 tcaccgccgcctcttctttctccttggct 19458



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 311   gcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
             |||||||  |||||||| |||||||||   |||||||||||||||||||
Sbjct: 17228 gcgtctttcttggcctgtttgagcgccgcaatgaggcctgccaagcaca 17276



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 172   ttcctctttctccttggctttctt 195
             ||||||||||||||||||||||||
Sbjct: 17152 ttcctctttctccttggctttctt 17175



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 250   cttggctttctttgcttcagcatccttggcctc 282
             ||||||| ||||||||| ||| |||||||||||
Sbjct: 19452 cttggctatctttgctttagcctccttggcctc 19484



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 135   tgtctccatgggcttcctctgatgtttggtctttgccttcctctttct 182
             ||||||| | |||| |||||||||||| ||| || ||||| |||||||
Sbjct: 14790 tgtctccgttggctacctctgatgttttgtccttcccttcgtctttct 14837

---

>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                         
Query: 250   cttggctttctttgcttcagcatccttggcctccttttcttgcatggccttggctgctgc 309
             |||||| || || |||||||| || |||||||||| ||| | | | ||||| || |||||
Sbjct: 27774 cttggcatttttcgcttcagcctctttggcctcctcttcctccttcgcctttgccgctgc 27715

                                                               
Query: 310   tgcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
              |||||||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 27714 cgcgtcttccttggcctgcttgagcacctcgatgaggcctgccaagcaca 27665



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                         
Query: 312    cgtcttctttggcctgcttgagcgcctggatgaggcctgccaa 354
              ||||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 123759 cgtcttccttggcctgcttgagtgcctcgatgaggcctgccaa 123717



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                          
Query: 278    gcctccttttcttgcatggccttggctgctgctgcgtcttctttggcctgcttgagcgcc 337
              ||||||| ||||| | |||||||  | ||||| |||||  |||| ||||||||||| |||
Sbjct: 122910 gcctcctcttcttccttggccttaaccgctgccgcgtccgctttagcctgcttgagtgcc 122851

                                    
Query: 338    tggatgaggcctgccaagcaca 359
              | ||||||||||| ||||||||
Sbjct: 122850 tcgatgaggcctgtcaagcaca 122829



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                              
Query: 172    ttcctctttctccttggctttcttcacttgagcctcctttttctcctt 219
              ||||||||||||||||||||||||| |||  ||||||| || ||||||
Sbjct: 123830 ttcctctttctccttggctttcttcgcttctgcctcctcttcctcctt 123783



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 173   tcctctttctccttggctttctt 195
             |||||||||||||||||||||||
Sbjct: 24197 tcctctttctccttggctttctt 24175



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 176   tctttctccttggctttcttcacttgagcctcctttttctccttggct 223
             |||| |||||||||||||||  | |  ||||||| |||||||||||||
Sbjct: 24227 tcttcctccttggctttctttgcctccgcctcctctttctccttggct 24180

---

>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 296   gccttggctgctgctgcgtcttctttggcctgcttgagcgcctggatgaggcctgccaag 355
             ||||| || ||| ||||||| || ||||||| ||||||||||| |||||| |||||||||
Sbjct: 87689 gcctttgccgctactgcgtcctccttggccttcttgagcgccttgatgagtcctgccaag 87748

                 
Query: 356   caca 359
             ||||
Sbjct: 87749 caca 87752



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                         
Query: 209   tttttctccttggctgtattcacttcagcctccagtttttgcttggctttctttgcttca 268
             |||| |||||||||| | ||||| || ||||||  ||| | |||  ||||||||||||||
Sbjct: 68771 ttttcctccttggctttcttcacctccgcctcctctttctccttaactttctttgcttca 68712

                                                         
Query: 269   gcatccttggcctccttttcttgcatggccttggctgctgctgc 312
             || ||||||||||| | ||| | | | ||||||||||| |||||
Sbjct: 68711 gcctccttggcctcttcttcctccttcgccttggctgccgctgc 68668



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 302   gctgctgctgcgtcttctttggcctgcttgagcgcctggatgaggcc 348
             |||||||| |||||||| |||||||||||||| |||| || ||||||
Sbjct: 92993 gctgctgccgcgtcttccttggcctgcttgagtgccttgacgaggcc 93039



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                         
Query: 250   cttggctttctttgcttcagcatccttggcctccttttcttgcatggccttggctgctgc 309
             |||| |||||||||||||||| ||||||||||| | ||| | | | |||||||| |||||
Sbjct: 92932 cttgtctttctttgcttcagcctccttggcctcttcttcctccttcgccttggccgctgc 92991

                
Query: 310   tgc 312
             |||
Sbjct: 92992 tgc 92994



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 329   ttgagcgcctggatgaggcctgccaagcaca 359
             |||||||||| ||||||||||||||||||||
Sbjct: 90127 ttgagcgcctcgatgaggcctgccaagcaca 90157



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 302   gctgctgctgcgtcttctttggcctgcttgagcgcctggatgaggcc 348
             |||||||| |||||||| |||||||||||||| |||| || ||||||
Sbjct: 67875 gctgctgccgcgtcttccttggcctgcttgagtgccttgacgaggcc 67829



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 311   gcgtcttctttggcctgcttgagcgcctggatgaggcctgccaagcaca 359
             |||||||  ||||| || |||||||||  ||||||||||||||||||||
Sbjct: 70827 gcgtctttcttggcttgtttgagcgccgcgatgaggcctgccaagcaca 70779



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 250   cttggctttctttgcttcagcatccttggcctc 282
             |||| |||||||||||||||| |||||||||||
Sbjct: 67936 cttgtctttctttgcttcagcctccttggcctc 67904



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 172   ttcctctttctccttggctttctt 195
             ||||||||||||||||||||||||
Sbjct: 70903 ttcctctttctccttggctttctt 70880



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 181   ctccttggctttcttcacttgagcctcctttttctcctt 219
             |||||||||||||||||| |  ||||||| |||||||||
Sbjct: 68766 ctccttggctttcttcacctccgcctcctctttctcctt 68728



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 173   tcctctttctccttggctttcttcacttgagcctcctt 210
             ||||||||||||||| |||||||  ||| |||||||||
Sbjct: 92921 tcctctttctccttgtctttctttgcttcagcctcctt 92958



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 173   tcctctttctccttggctttcttcacttgagcctcctt 210
             ||||||||||||||| |||||||  ||| |||||||||
Sbjct: 67947 tcctctttctccttgtctttctttgcttcagcctcctt 67910



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 171   cttcctctttctccttggctttctt 195
             |||||||||||||||||||| ||||
Sbjct: 90044 cttcctctttctccttggctgtctt 90068

---

>emb|AL117379.14|HSJ563E14 Human DNA sequence from clone RP4-563E14 on chromosome 20 Contains the
             5' of the DATF1 gene encoding the death associated
             transcription factor 1 (DIO1, FLJ11265, KIAA0333), the 5'
             end of a novel geneand four CpG islands, complete sequence
          Length = 28519

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   tgtctccatgggcttcctctga 156
             ||||||||||||||||||||||
Sbjct: 23999 tgtctccatgggcttcctctga 24020

---

>gb|AC161470.3| Gallus gallus BAC clone CH261-85J8 from chromosome ul, complete sequence
          Length = 213142

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 265    ttcagcatccttggcctccttt 286
              ||||||||||||||||||||||
Sbjct: 167550 ttcagcatccttggcctccttt 167529

---

>gb|AC113931.2| Homo sapiens chromosome 16 clone CTD-2330P21, complete sequence
          Length = 100469

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 256   tttctttgcttcagcatccttg 277
             ||||||||||||||||||||||
Sbjct: 46395 tttctttgcttcagcatccttg 46416

---

>gb|AC087188.5| Homo sapiens chromosome 16 clone RP11-345M22, complete sequence
          Length = 187870

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 256    tttctttgcttcagcatccttg 277
              ||||||||||||||||||||||
Sbjct: 171826 tttctttgcttcagcatccttg 171805

---

>ref|XM_864892.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 2 (LOC540926),
           mRNA
          Length = 3314

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 229 gctgcattatttcatttcatt 209

---

>ref|XM_874434.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 17 (LOC540926),
           mRNA
          Length = 3323

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 229 gctgcattatttcatttcatt 209

---

>ref|XM_874351.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 16 (LOC540926),
           mRNA
          Length = 3377

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 229 gctgcattatttcatttcatt 209

---

>ref|XM_874094.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 14 (LOC540926),
           mRNA
          Length = 3053

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 229 gctgcattatttcatttcatt 209

---

>ref|XM_873812.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 11 (LOC540926),
           mRNA
          Length = 1030

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 229 gctgcattatttcatttcatt 209

---

>ref|XM_873623.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 9 (LOC540926),
           mRNA
          Length = 3245

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 229 gctgcattatttcatttcatt 209

---

>ref|XM_873527.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 8 (LOC540926),
           mRNA
          Length = 1360

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 229 gctgcattatttcatttcatt 209

---

>ref|XM_873122.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 4 (LOC540926),
           mRNA
          Length = 493

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 420 gctgcattatttcatttcatt 400

---

>gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome 7, complete sequence
          Length = 190553

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      aaaaaaggaagctgcattatt 22
              |||||||||||||||||||||
Sbjct: 162668 aaaaaaggaagctgcattatt 162648

---

>ref|NM_001031694.1| Homo sapiens sex comb on midleg homolog 1 (Drosophila) (SCMH1),
           transcript variant 1, mRNA
          Length = 3306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 245 gctgcattatttcatttcatt 225

---

>gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complete sequence
          Length = 152690

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    aagctgcattatttcatttca 30
             |||||||||||||||||||||
Sbjct: 57109 aagctgcattatttcatttca 57129

---

>gb|BC009752.2| Homo sapiens sex comb on midleg homolog 1 (Drosophila), transcript
           variant 1, mRNA (cDNA clone MGC:1108 IMAGE:3010273),
           complete cds
          Length = 3306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  gctgcattatttcatttcatt 32
           |||||||||||||||||||||
Sbjct: 245 gctgcattatttcatttcatt 225

---

>emb|AL353580.7| Human DNA sequence from clone RP11-248N6 on chromosome 13 Contains two
             olfactory receptor pseudogenes and a nucleophosmin
             (nucleolar phosphoprotein B23, numatrin) NPM1 pseudogene,
             complete sequence
          Length = 162695

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   tctccttggctgtattcactt 233
             |||||||||||||||||||||
Sbjct: 50811 tctccttggctgtattcactt 50831

---

>gb|AC148335.4| Mus musculus BAC clone RP23-103H10 from chromosome 10, complete
             sequence
          Length = 210685

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    aagctgcattatttcatttca 30
             |||||||||||||||||||||
Sbjct: 15322 aagctgcattatttcatttca 15342

---

>gb|AC007068.17| Homo sapiens 12p BAC RPCI11-75L1 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178607

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 159   tttggtctttgccttcctctt 179
             |||||||||||||||||||||
Sbjct: 45858 tttggtctttgccttcctctt 45838

---

>emb|BX005236.16| Mouse DNA sequence from clone RP23-254A23 on chromosome X, complete
             sequence
          Length = 122633

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 242   agtttttgcttggctttcttt 262
             |||||||||||||||||||||
Sbjct: 94398 agtttttgcttggctttcttt 94378

---

>gb|AC023058.17|AC023058 Homo sapiens 3 BAC CTB-187G23 (CalTech Human BAC Library B) complete
              sequence
          Length = 140966

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    tctccttggctgtattcactt 233
              |||||||||||||||||||||
Sbjct: 129628 tctccttggctgtattcactt 129608

---

>gb|AC074047.6|AC074047 Mus musculus 7 BAC RP23-377F9 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 150351

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     aaaaaaggaagctgcattatt 22
             |||||||||||||||||||||
Sbjct: 69099 aaaaaaggaagctgcattatt 69079

---

>gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, complete sequence
          Length = 206640

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 177   ctttctccttggctttcttcacttg 201
             |||||||||| ||||||||||||||
Sbjct: 30703 ctttctcctttgctttcttcacttg 30679

---

>emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chromosome 2, complete
              sequence
          Length = 230193

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    tttgcttggctttctttgctt 266
              |||||||||||||||||||||
Sbjct: 117548 tttgcttggctttctttgctt 117568

---

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    gccttggctgctgctgcgtc 315
              ||||||||||||||||||||
Sbjct: 323068 gccttggctgctgctgcgtc 323049

---

>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence
          Length = 166093

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   ctttgccttcctctttctcc 184
             ||||||||||||||||||||
Sbjct: 97955 ctttgccttcctctttctcc 97974

---

>gb|AY679728.1| Rattus norvegicus strain BN/SsNHsd cyclin-dependent kinase
           inhibitor 2a p16Ink4a (Cdkn2a) mRNA, complete cds
          Length = 586

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 516 cctcctttttctccttggct 535

---

>gb|AY679727.1| Rattus norvegicus strain BN/SsNHsd cyclin-dependent kinase
           inhibitor 2a p19Arf (Cdkn2a) mRNA, complete cds
          Length = 701

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 581 cctcctttttctccttggct 600

---

>gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, complete sequence
          Length = 181471

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   tgcttcagcatccttggcctcctt 285
             |||||||||||||| |||||||||
Sbjct: 68754 tgcttcagcatcctgggcctcctt 68731

---

>ref|XM_874594.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 18 (LOC540926),
           mRNA
          Length = 3222

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctgcattatttcatttcatt 32
           ||||||||||||||||||||
Sbjct: 419 ctgcattatttcatttcatt 400

---

>ref|XM_874270.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
          on midleg homolog 1), transcript variant 15
          (LOC540926), mRNA
          Length = 2932

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 13 ctgcattatttcatttcatt 32
          ||||||||||||||||||||
Sbjct: 58 ctgcattatttcatttcatt 39

---

>ref|XM_873718.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 10 (LOC540926),
           mRNA
          Length = 1337

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctgcattatttcatttcatt 32
           ||||||||||||||||||||
Sbjct: 419 ctgcattatttcatttcatt 400

---

>ref|XM_873323.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 6 (LOC540926),
           mRNA
          Length = 558

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctgcattatttcatttcatt 32
           ||||||||||||||||||||
Sbjct: 419 ctgcattatttcatttcatt 400

---

>ref|XM_873225.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb
           on midleg homolog 1), transcript variant 5 (LOC540926),
           mRNA
          Length = 576

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctgcattatttcatttcatt 32
           ||||||||||||||||||||
Sbjct: 416 ctgcattatttcatttcatt 397

---

>ref|XM_415903.1| PREDICTED: Gallus gallus similar to AP1 gamma subunit binding protein
            1 isoform 1; gamma-synergin; adaptor-related protein
            complex 1 gamma subunit-binding protein 1 (LOC417658),
            mRNA
          Length = 3257

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  gtcttctttggcctgcttga 332
            ||||||||||||||||||||
Sbjct: 1248 gtcttctttggcctgcttga 1229

---

>gb|AC122528.3| Mus musculus BAC clone RP24-506F15 from chromosome 9, complete sequence
          Length = 142071

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 171   cttcctctttctccttggctttct 194
             |||| |||||||||||||||||||
Sbjct: 10810 cttcttctttctccttggctttct 10787

---

>gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosome 18, complete
             sequence
          Length = 220244

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   acttgagcctcctttttctc 216
             ||||||||||||||||||||
Sbjct: 42852 acttgagcctcctttttctc 42833

---

>gb|BT013831.1| Lycopersicon esculentum clone 132788F, mRNA sequence
          Length = 1543

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tttctttgcttcagcatcct 275
           ||||||||||||||||||||
Sbjct: 49  tttctttgcttcagcatcct 30

---

>ref|NM_031550.1| Rattus norvegicus cyclin-dependent kinase inhibitor 2A (Cdkn2a),
           mRNA
          Length = 707

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 540 cctcctttttctccttggct 559

---

>ref|NM_012236.1| Homo sapiens sex comb on midleg homolog 1 (Drosophila) (SCMH1),
           transcript variant 2, mRNA
          Length = 3250

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctgcattatttcatttcatt 32
           ||||||||||||||||||||
Sbjct: 490 ctgcattatttcatttcatt 471

---

>ref|XM_838083.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0999)
             partial mRNA
          Length = 12525

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gccttggctgctgctgcgtc 315
             ||||||||||||||||||||
Sbjct: 11084 gccttggctgctgctgcgtc 11065

---

>ref|XM_752318.1| Ustilago maydis 521 hypothetical protein (UM01264.1) partial mRNA
          Length = 6912

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  ctcctttttctccttggctg 224
            ||||||||||||||||||||
Sbjct: 3315 ctcctttttctccttggctg 3296

---

>gb|AY319391.1| Oncorhynchus mykiss Na/K ATPase alpha subunit isoform 1a mRNA,
           complete cds
          Length = 3250

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 179 ttctccttggctttcttcac 198
           ||||||||||||||||||||
Sbjct: 131 ttctccttggctttcttcac 112

---

>gb|AC027119.5| Homo sapiens chromosome 3 clone RP11-113L10 map 3p, complete sequence
          Length = 175590

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    ctttgccttcctctttctcc 184
              ||||||||||||||||||||
Sbjct: 148048 ctttgccttcctctttctcc 148029

---

>gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, complete sequence
          Length = 192819

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   ctttgccttcctctttctcc 184
             ||||||||||||||||||||
Sbjct: 26078 ctttgccttcctctttctcc 26097

---

>ref|XM_661426.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30489)
            partial mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   ctgcattatttcatttcatt 32
            ||||||||||||||||||||
Sbjct: 1439 ctgcattatttcatttcatt 1458

---

>emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chromosome 17, complete
             sequence
          Length = 79274

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 246   tttgcttggctttctttgcttcag 269
             |||||||||||||||| |||||||
Sbjct: 28217 tttgcttggctttcttagcttcag 28240

---

>gb|AC147712.17| Medicago truncatula clone mth2-34f1, complete sequence
          Length = 136410

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  tgatgtttggtctttgcctt 173
            ||||||||||||||||||||
Sbjct: 6446 tgatgtttggtctttgcctt 6465

---

>emb|AL583862.35| Human DNA sequence from clone RP11-506B15 on chromosome 1 Contains the
             3' end of the gene for a novel protein (LOC149469), three
             novel genes (FLJ00408), gene KIAA0467 (FLJ45025,
             FLJ23425), the gene for a novel protein (HT036)
             (FLJ38925), the 5' end of the PTPRF gene for protein
             tyrosine phosphatase receptor type F and a CpG island,
             complete sequence
          Length = 167444

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   tggccttggctgctgctgcg 313
             ||||||||||||||||||||
Sbjct: 27984 tggccttggctgctgctgcg 28003

---

>emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chromosome 1 Contains a CpG
             island, complete sequence
          Length = 111901

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   agcatccttggcctcctttt 287
             ||||||||||||||||||||
Sbjct: 16902 agcatccttggcctcctttt 16921

---

>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a
             ras-related C3 botulinum toxin substrate 3 (rho family,
             small GTP binding protein Rac3) pseudogene, two novel
             genes, a pseudogene similar to part of heat shock 90kD
             protein 1, beta (HSPCB) and a CpG island, complete
             sequence
          Length = 178362

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ttcagcctccagtttttgct 251
             ||||||||||||||||||||
Sbjct: 78842 ttcagcctccagtttttgct 78861

---

>emb|AL109835.13|HSA151N12 Human DNA sequence from clone RP11-151N12 on chromosome Xq21.31-22.1,
             complete sequence
          Length = 85461

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ctgcattatttcatttcatt 32
             ||||||||||||||||||||
Sbjct: 18578 ctgcattatttcatttcatt 18597

---

>emb|AL110502.1|HSDJ635E8 Human DNA sequence from clone RP4-635E8 on chromosome 1p33-34.3
            Contains part of the SCMH1 gene for sex comb on midleg
            homolog 1 (Drosophila) and a ribosomal protein L23a
            (RPL23A) pseudogene, complete sequence
          Length = 136649

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   ctgcattatttcatttcatt 32
            ||||||||||||||||||||
Sbjct: 7050 ctgcattatttcatttcatt 7031

---

>ref|NM_001024523.1| Bos taurus guanine nucleotide binding protein (G protein), gamma 11
           (GNG11), mRNA
          Length = 745

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 3   aaaaaggaagctgcattatttcat 26
           ||||||| ||||||||||||||||
Sbjct: 422 aaaaaggcagctgcattatttcat 445

---

>ref|XM_787071.1| PREDICTED: Strongylocentrotus purpuratus similar to CG1234-PA
           (LOC587339), partial mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 174 cctctttctccttggctttcttca 197
           |||| |||||||||||||||||||
Sbjct: 85  cctccttctccttggctttcttca 62

---

>emb|AL669858.8| Mouse DNA sequence from clone RP23-51G7 on chromosome 11 Contains a
              ribosomal protein L15 (Rpl15) pseudogene, the Otx1 gene for
              orthodenticle homolog 1, the 3' end of a novel gene and two
              CpG islands, complete sequence
          Length = 240514

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    gtttttgcttggctttcttt 262
              ||||||||||||||||||||
Sbjct: 177162 gtttttgcttggctttcttt 177143

---

>emb|BX511252.17| Zebrafish DNA sequence from clone CH211-240E14 in linkage group 16,
             complete sequence
          Length = 137574

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   cctctttctccttggctttc 193
             ||||||||||||||||||||
Sbjct: 68557 cctctttctccttggctttc 68576

---

>emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in linkage group 21, complete
              sequence
          Length = 263757

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    ttgcttggctttctttgctt 266
              ||||||||||||||||||||
Sbjct: 232446 ttgcttggctttctttgctt 232465

---

>gb|AF474975.1| Rattus norvegicus strain COP cyclin-dependent kinase inhibitor 2a
           p19Arf (Cdkn2a) mRNA, complete cds
          Length = 698

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 581 cctcctttttctccttggct 600

---

>gb|AF474974.1| Rattus norvegicus strain ACI/SegHsd cyclin-dependent kinase
           inhibitor 2a p19Arf (Cdkn2a) mRNA, complete cds
          Length = 701

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 581 cctcctttttctccttggct 600

---

>gb|AF474977.1| Rattus norvegicus strain COP cyclin-dependent kinase inhibitor 2a
           p16Ink4a (Cdkn2a) mRNA, complete cds
          Length = 577

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 507 cctcctttttctccttggct 526

---

>gb|AF474976.1| Rattus norvegicus strain ACI/SegHsd cyclin-dependent kinase
           inhibitor 2a p16Ink4a (Cdkn2a) mRNA, complete cds
          Length = 578

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 516 cctcctttttctccttggct 535

---

>ref|XM_626977.1| Cryptosporidium parvum Iowa II putative amino acid transporter, 11
            transmembrane domain protein (cgd3_4350), partial mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   ctgcattatttcatttcatt 32
            ||||||||||||||||||||
Sbjct: 1439 ctgcattatttcatttcatt 1458

---

>gb|BC102674.1| Bos taurus guanine nucleotide binding protein (G protein), gamma
           11, mRNA (cDNA clone MGC:127878 IMAGE:30957698),
           complete cds
          Length = 617

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 3   aaaaaggaagctgcattatttcat 26
           ||||||| ||||||||||||||||
Sbjct: 279 aaaaaggcagctgcattatttcat 302

---

>gb|AC022416.5|AC022416 Homo sapiens chromosome 5 clone CTC-489P21, complete sequence
          Length = 139980

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ggacatatgttttatttgaa 56
             ||||||||||||||||||||
Sbjct: 49651 ggacatatgttttatttgaa 49632

---

>gb|AC126471.4| Homo sapiens 12 BAC RP11-629O19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 199945

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ttatttcatttcattggggg 37
             ||||||||||||||||||||
Sbjct: 89704 ttatttcatttcattggggg 89685

---

>ref|XM_579513.1| PREDICTED: Rattus norvegicus hypothetical gene supported by
           NM_031550 (LOC497805), mRNA
          Length = 709

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 541 cctcctttttctccttggct 560

---

>emb|BX322651.3| Zebrafish DNA sequence from clone DKEYP-32G10, complete sequence
          Length = 152913

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 163   gtctttgccttcctctttctcctt 186
             ||||||||||| ||||||||||||
Sbjct: 57348 gtctttgccttgctctttctcctt 57371

---

>emb|AL824713.9| Mouse DNA sequence from clone RP23-191F15 on chromosome X, complete
             sequence
          Length = 163119

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   cacttcagcctccagttttt 248
             ||||||||||||||||||||
Sbjct: 76683 cacttcagcctccagttttt 76664

---

>gb|AF149046.1|AF149046 Homo sapiens Sex comb on midleg homolog 1 isoform 2 (SCMH1) mRNA,
           complete cds
          Length = 3321

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctgcattatttcatttcatt 32
           ||||||||||||||||||||
Sbjct: 490 ctgcattatttcatttcatt 471

---

>gb|AF149045.1|AF149045 Homo sapiens Sex comb on midleg homolog 1 isoform 1 (SCMH1) mRNA,
           complete cds
          Length = 3250

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  ctgcattatttcatttcatt 32
           ||||||||||||||||||||
Sbjct: 490 ctgcattatttcatttcatt 471

---

>gb|AC151590.2| Nematostella vectensis clone JGIAFIN-297A6, complete sequence
          Length = 42658

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   tttttgcttggctttctttg 263
             ||||||||||||||||||||
Sbjct: 35515 tttttgcttggctttctttg 35534

---

>gb|AY940097.1| Homo sapiens X-ray repair complementing defective repair in Chinese
             hamster cells 4 (XRCC4) gene, complete cds
          Length = 279061

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ggacatatgttttatttgaa 56
             ||||||||||||||||||||
Sbjct: 45127 ggacatatgttttatttgaa 45146

---

>gb|L81167.1|L81167 Rattus norvegicus p16 protein (P16INK4a) mRNA, complete cds
          Length = 707

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 cctcctttttctccttggct 223
           ||||||||||||||||||||
Sbjct: 540 cctcctttttctccttggct 559

---

>gb|BT020970.1| Bos taurus guanine nucleotide binding protein (G protein), gamma 11
           (GNG11), mRNA, complete cds
          Length = 745

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 3   aaaaaggaagctgcattatttcat 26
           ||||||| ||||||||||||||||
Sbjct: 422 aaaaaggcagctgcattatttcat 445

---

>dbj|AP002765.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-634B22, complete
             sequence
          Length = 178169

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   tgcttcagcatccttggcctcctt 285
             |||||||||||||| |||||||||
Sbjct: 96616 tgcttcagcatcctgggcctcctt 96593

---

>dbj|AK112308.1| Ciona intestinalis cDNA, clone:ciad015e10, full insert sequence
          Length = 1938

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  ttgcatgctgtctccatggg 146
            ||||||||||||||||||||
Sbjct: 1449 ttgcatgctgtctccatggg 1468

---

>gb|AY610232.1| Sus scrofa clone rpbfe0102_o5.y1.abd, mRNA sequence
          Length = 409

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 3   aaaaaggaagctgcattatttcat 26
           ||||||| ||||||||||||||||
Sbjct: 258 aaaaaggcagctgcattatttcat 281

---

>gb|AC122515.5| Mus musculus BAC clone RP24-455N18 from 9, complete sequence
          Length = 164271

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    cttcctctttctccttggctttct 194
              |||| |||||||||||||||||||
Sbjct: 123410 cttcttctttctccttggctttct 123387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,939,914
Number of Sequences: 3902068
Number of extensions: 5939914
Number of successful extensions: 124310
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124055
Number of HSP's gapped (non-prelim): 253
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---