>LPHN3_BOVIN (O97827) Latrophilin-3 precursor|
          Length = 1580

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -3

Query: 191 PFVHTARRSYR---LNGPVKCSDRGDGGGLPP 105
           P +H  + S R   L  P++ ++RG GG LPP
Sbjct: 15  PIIHGGKHSERHPALASPLRHAERGPGGALPP 46

>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad|
           development protein 2)
          Length = 2032

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 111 QTAPVAAIRTLHRTIQSVGATGGVYKGQGRSQRELMTRA 227
           +TAP+   R  HR  +S   TGGVY  +G   R L+  A
Sbjct: 124 RTAPIKKTRK-HRRRRSGSFTGGVYPRKGHRNRSLLGHA 161

>HCN3_HUMAN (Q9P1Z3) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 3
          Length = 774

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
 Frame = -3

Query: 263 LQLLVFNEECLVSASHQ---LALTTSLPFVHTARRSYRLNG-------PVKCSDRGDGGG 114
           LQ         ++ +HQ   L L+   P    AR ++R  G       PV+         
Sbjct: 611 LQAAAVTSNVAIALTHQRGPLPLSPDSPATLLARSAWRSAGSPASPLVPVRAGPWASTSR 670

Query: 113 LPPPTSREVH*TLSFRGRRSCNKVSVGEPAEG 18
           LP P +R +H +LS  GR   ++VS+  P  G
Sbjct: 671 LPAPPARTLHASLSRAGR---SQVSLLGPPPG 699

>CABP2_MOUSE (Q9JLK4) Calcium-binding protein 2 (CaBP2)|
          Length = 215

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 73  DKVQWTSRDVGGGKPPPSPRSEHFTG 150
           ++ QW    +GG +P P PR+E   G
Sbjct: 14  ERWQWPGSPLGGSRPSPGPRTEEQEG 39

>TR10A_HUMAN (O00220) Tumor necrosis factor receptor superfamily member 10A|
           precursor (Death receptor 4) (TNF-related
           apoptosis-inducing ligand receptor 1) (TRAIL receptor 1)
           (TRAIL-R1) (CD261 antigen)
          Length = 468

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = +1

Query: 82  QWTSRDVGGGKPPPSPRSEHFTGPFNR*ERRAVCTKGRDVVNAS 213
           QW    +G   PP S RSEH  G  NR      CT+G    NAS
Sbjct: 122 QWEHSPLGELCPPGSHRSEH-PGACNR------CTEGVGYTNAS 158

>COG6_HUMAN (Q9Y2V7) Conserved oligomeric Golgi complex component 6|
          Length = 605

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 179 TARRSYRLNGPVKCSDRGDGGGLPPPTSREVH*TLSFRG 63
           TARRS  + G +    RG  GG P P     H  L + G
Sbjct: 219 TARRSTVVRGFIDALTRGGPGGTPRPIEMHSHDPLRYVG 257

>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein|
           134) (Mel18 and Bmi1-like RING finger)
          Length = 353

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 92  LATSGAANRPRRRDPNTSPDHSIGRSDGR 178
           L  +GAA   R R P   P+ S+GR  GR
Sbjct: 52  LGQAGAAGCSRSRPPALEPERSLGRLRGR 80

>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3|
          Length = 208

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 30  FTYGNLVTTSPSSK**GSMDFSRRRGRQTAPVAAIRTLHRTIQSVG--ATGGVYKGQGRS 203
           F  G++V  + +SK  G     +R G+   P+A     HR   S+G  A   V+KG+  +
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 204 QR 209
            R
Sbjct: 160 GR 161

>RL3_STRPN (Q97SV5) 50S ribosomal protein L3|
          Length = 208

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 30  FTYGNLVTTSPSSK**GSMDFSRRRGRQTAPVAAIRTLHRTIQSVG--ATGGVYKGQGRS 203
           F  G++V  + +SK  G     +R G+   P+A     HR   S+G  A   V+KG+  +
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 204 QR 209
            R
Sbjct: 160 GR 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,774,535
Number of Sequences: 219361
Number of extensions: 1102705
Number of successful extensions: 2690
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)